Sus scrofa (pig): 100188903
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Entry
100188903 CDS
T01009
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100188903 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100188903 (SMARCA5)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100188903 (SMARCA5)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
100188903 (SMARCA5)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
100188903 (SMARCA5)
RSF complex
100188903 (SMARCA5)
WICH complex
100188903 (SMARCA5)
B-WICH complex
100188903 (SMARCA5)
NORC complex
100188903 (SMARCA5)
BRF complex
100188903 (SMARCA5)
NuRF complex (fruit fly)
100188903 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
100188903
NCBI-ProteinID:
XP_003129222
Ensembl:
ENSSSCG00000009047
LinkDB
All DBs
Position
8:complement(84184572..84224943)
Genome browser
AA seq
1052 aa
AA seq
DB search
MSSAADPPPPPPPESAPSKPASSAACSGSNNSNKGGPEGFGVPAAPSAAGAGPTDSEMEE
VFDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQE
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgaccctccgccacccccgcctcccgagagcgcgccttccaagccc
gcatcctccgccgcctgtagcgggagcaacaacagcaacaaaggcggccccgagggcttc
ggcgtcccggcggctccctccgcggccggcgccggccccacggactccgagatggaggaa
gtatttgatgatgcgtctcctgggaagcaaaaagaaatccaagaaccagatcctacctat
gaagagaaaatgcaaactgaccgggcaaatagatttgagtatttattaaagcagacggag
ctgtttgcacatttcattcagcctgctgctcagaagactccaacctcccctttgaagatg
aaaccagggcgtccacgaataaaaaaggatgagaaacagaacttgttatcagttggcgac
tatcgacaccgaagaacagagcaagaggaggatgaagaattattaacagaaagctccaaa
gcaaccaatgtttgcactcgatttgaagactctccatcatatgtaaaatggggtaaactg
agagattatcaggtccgaggattaaattggctcatttctttgtatgagaatggtatcaat
ggtatccttgcagatgaaatgggcctgggaaagactcttcaaacgatttctcttcttggg
tacatgaaacactatagaaacattcctggtcctcatatggtcttggttcctaaatctaca
ttacacaactggatgagtgaattcaagagatgggtcccaacacttagatctgtttgttta
ataggagataaagaacaaagagctgcttttgttagagatgttttactaccaggagaatgg
gatgtatgcgtaacgtcttatgaaatgcttattaaagagaagtctgttttcaaaaaattt
aattggaggtacttagttatagatgaagctcaccggatcaaaaatgaaaaatccaagttg
tcagaaatagtgagggaattcaagactacaaatcgactattattaactggaacacctctt
caaaacaacttgcatgagctttggtcacttctgaattttctgttgccagatgtctttaat
tcagctgatgactttgattcctggtttgatacaaacaattgccttggggatcaaaagcta
gttgagaggcttcatatggttttgcgtccattcctccttcgtcgaattaaggctgatgtt
gagaagagtttgcctccaaagaaggaagtaaaaatctatgtgggtctcagtaaaatgcaa
agagaatggtatactcggatattaatgaaggatatagatatactaaactctgcagggaag
atggacaaaatgaggctgttgaacatcttgatgcagttgaggaagtgctgtaatcatcca
tatctatttgatggagctgaacctggtccaccttatacaacggacatgcatctagttacc
aacagtggcaaaatggtggtgttagacaaactgctccctaaattaaaagagcaaggttca
cgagtactaatcttcagtcagatgacaagggtgttggatattttggaagattattgcatg
tggagaaattatgagtattgtaggttggatgggcagacaccccatgatgagagacaagag
tccatcaatgcatacaatgaaccaaatagcacaaagtttgttttcatgttaagcacacgt
gctggtggtcttggcatcaatcttgctaccgctgatgtagtaattttgtatgactcagat
tggaatccccaagtagatcttcaggctatggaccgagcccatagaattggacaaaccaag
acagtcagagtgttccgcttcataactgataacacagtagaagaaagaatagtggaacgt
gctgagatgaaactcagactggattccatagtcatccaacaaggaagacttgtggatcag
aatcttaacaaaatcgggaaagatgaaatgcttcaaatgataaggcatggggcaacacat
gtatttgcttcaaaggaaagtgagattactgatgaggatattgatggtattttggaaaga
ggtgccaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctcactt
agaaactttacaatggatacagagtcaagtgtttataactttgaaggagaagattataga
gaaaaacaaaagattgcattcacagagtggattgaaccacctaaacgagaaagaaaagcc
aactatgctgttgatgcctatttcagggaagctcttcgcgtcagtgaacctaaagcaccc
aaagctcctcgacctccaaaacaacccaatgttcaggatttccagttctttcctccacgt
ctatttgaattattagaaaaagaaattctatattacagaaaaacaattgggtacaaggtg
cctcgaaatcctgacctaccaaatgcagcacaggcgcaaaaagaagaacagctcaaaatt
gatgaggctgaaccccttaacgatgaagagttagaggaaaaagagaaacttctaacacag
ggatttaccaattggaataagagagattttaaccagtttattaaagctaatgagaagtgg
ggtcgcgatgatattgaaaatatagcaagagaagtagaaggaaaaactccagaagaagtc
attgaatattcagctgtgttctgggaaagatgcaatgagctacaagacatagagaagatt
atggctcaaattgaaaggggagaggcaagaattcaaagaagaattagtatcaaaaaagca
cttgacacgaagattggacggtacaaagcaccttttcatcagctgagaatatcttacggt
actaacaaagggaaaaactatactgaagaagaggatcgttttctgatctgtatgcttcat
aagcttggattcgacaaagaaaatgtttatgatgaattgcggcagtgtatccgcaactct
cctcagttcagatttgactggtttctaaagtccagaactgcaatggagctccagcggagg
tgtaacaccttaattaccttgattgaaagagaaaacatggaactagaagaaaaggagaag
gcagagaaaaagaaaagaggaccaaaaccttcaacacagaaacgtaaaatggatggagca
cctgatggcagaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
