Sus scrofa (pig): 100188978
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Entry
100188978 CDS
T01009
Symbol
APPL1
Name
(RefSeq) DCC-interacting protein 13-alpha
KO
K08733
DCC-interacting protein 13 alpha
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04081
Hormone signaling
ssc04211
Longevity regulating pathway
ssc04920
Adipocytokine signaling pathway
ssc05200
Pathways in cancer
ssc05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
100188978 (APPL1)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
100188978 (APPL1)
09149 Aging
04211 Longevity regulating pathway
100188978 (APPL1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100188978 (APPL1)
09162 Cancer: specific types
05210 Colorectal cancer
100188978 (APPL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100188978 (APPL1)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100188978 (APPL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
PID
PH
BAR
SOS1_NGEF_PH
PTB
PH_9
Med26_C
Gemin6
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
100188978
NCBI-ProteinID:
NP_001128438
UniProt:
B5LX40
A0A4X1VJU7
LinkDB
All DBs
Position
13:39089157..39124969
Genome browser
AA seq
708 aa
AA seq
DB search
MPGIDKLPIEETLEDSPQTRSLLGVFEEDATAISSYMNQLYQAMRRIYDAQNELSAATHL
TSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDELSSCHAVLSTQLADAMMFPITQFKE
RDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQTMMH
YFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNNQLEEFLTNIGTSVQNVRREM
DSDVETMQQTIEDLEVASDPLYVPDPDPTKFPVNRNLTRKAGYLNARNKTGLVSSTWDRQ
FYFTQGGNLMSQARGDVAGGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKKSSILQAESK
KDHEEWICTINNISKQIYLSENPEEIAARVNQSALEAVTPSPSFQQRHESLRPAGQSRPP
TARTSSSGSLGSESSSLAALSLDSLVAPDTPIQFDIISPVCEDQSGQAKASGQGGRRTNP
FGESGGGIKSETEDSILHQLFIVRFLGSMEVKSDDNPDVVYETMRQILAARAIHNIFRMT
ESHLLVTCDCLKLIDPQTQVTRLTFPLPSVVLYATHQENKRLFGFVLRTSGGRSESNLSS
VCYIFESNNEGEKICDSVGLAKQIALHAELDRRASEKQKEMERVKEKQQKELSKQKQIEK
DLEEQSRLIAASSRPNQASSEGQFVVLSSSQSEESDLGEEGKKRESEA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgccggggatcgacaagctgcccatcgaagagacgctggaggacagcccgcagacaagg
tctttactgggtgtatttgaagaagatgctacagctatttccagctatatgaaccaattg
tatcaagctatgcgtcggatttatgatgcacagaatgaattaagtgcagcaacacacctg
acttcaaaacttttaaaagaatatgaaaaacagcgttttccattggggggtgatgatgaa
gttatgagttctactttgcaacagttttcaaaagttatagatgagcttagctcttgtcat
gcggtactttcaacgcagcttgctgatgccatgatgtttcccattacccagtttaaagaa
agagatctgaaagaaatattgacattaaaggaagtgtttcagattgccagtaatgatcat
gatgctgcaattaacagatacagcagactgtcaaaaaaaagagaaaatgacaaggtgaaa
tatgaagtaacagaagatgtctacacttccagaaaaaaacaacaccagaccatgatgcat
tatttttgtgcattaaatactcttcaatacaaaaagaaaatagcattgttagaacctcta
cttggatacatgcaagctcagataagtttctttaagatgggttcagaaaatcttaataac
caactggaagaattcttaactaatattggaacaagtgtacagaatgttcgcagggaaatg
gacagtgatgtagagaccatgcagcagacaatagaggatttggaagtagccagtgacccc
ttatatgtgcctgacccagatcccaccaaatttcctgttaatcgaaacttaacccggaaa
gctggctaccttaatgctaggaataaaacaggcttggtgtcatctacctgggacagacag
ttttacttcacgcagggcggaaacctaatgagtcaggcccgtggggacgtagccggaggc
ctggccatggacatagacaactgttcagtaatggctgtggactgtgaagaccggcgatac
tgttttcagatcacttcttttgatggaaaaaagtcttcaattttgcaagcagagagtaaa
aaagaccatgaagagtggatctgtacaataaataatatatctaaacaaatatatttaagt
gaaaacccagaggaaattgctgcacgagtaaatcagtcagctttggaagctgtcactcct
tccccatctttccagcagaggcacgagagcctgcggccagcaggacaatctcggccaccg
acagctcgaaccagcagttcaggatccttaggatctgagtcctcaagtttggccgccctc
tctttagattctctcgttgccccagacaccccaatacagtttgacatcatttctcctgtg
tgcgaagatcagtctggccaggcaaaagcctctggccagggaggcaggcgtacaaatcca
tttggagaatctggaggaggtattaaatccgaaactgaagattctattcttcatcagttg
tttattgtccgattccttggttctatggaggtgaaatcagatgacaatccagatgttgtt
tatgaaacaatgcgacaaatcttagctgcccgggccatccataacatttttcgtatgaca
gaatcacatttattagtcacttgtgattgtttaaagttaattgatccacagacacaagtt
acaaggctcacgtttccgttacctagtgtagttttgtatgctacacaccaggaaaataag
aggctttttggatttgttcttcggacatcaggagggagaagtgaaagtaatctgtcatcc
gtctgctatatatttgaatcaaacaatgagggtgaaaagatttgtgattctgttggactg
gcgaaacagattgctttgcatgcagaactggatcgtagggcatcagaaaaacaaaaagaa
atggagagggtcaaagagaagcaacagaaagaactcagcaaacaaaaacaaattgaaaag
gacttagaagaacaaagtcggttgatagctgcttccagtagaccgaaccaagccagtagt
gaggggcagtttgttgtccttagcagtagccagtcagaagagagtgatttgggagaagaa
ggaaagaagagagagtcagaagcataa
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