KEGG   Sus scrofa (pig): 100294676
Entry
100294676         CDS       T01009                                 
Symbol
CLDN18
Name
(RefSeq) claudin-18 precursor
  KO
K06087  claudin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03272  Virion - Hepatitis viruses
ssc04382  Cornified envelope formation
ssc04514  Cell adhesion molecule (CAM) interaction
ssc04530  Tight junction
ssc04670  Leukocyte transendothelial migration
ssc05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    100294676 (CLDN18)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    100294676 (CLDN18)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100294676 (CLDN18)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    100294676 (CLDN18)
  09158 Development and regeneration
   04382 Cornified envelope formation
    100294676 (CLDN18)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    100294676 (CLDN18)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ssc03037]
    100294676 (CLDN18)
   04147 Exosome [BR:ssc04147]
    100294676 (CLDN18)
Cilium and associated proteins [BR:ssc03037]
 Other cilia and associated proteins
  Stereociliary proteins
   100294676 (CLDN18)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   100294676 (CLDN18)
  Exosomal proteins of colorectal cancer cells
   100294676 (CLDN18)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 CyanoTRADDas_TM
Other DBs
NCBI-GeneID: 100294676
NCBI-ProteinID: NP_001153553
Ensembl: ENSSSCG00000011657
UniProt: C3VMW4 A0A8D1JJ57
LinkDB
Position
13:78794573..78823761
AA seq 261 aa
MSTTTCQVVGFLLSVLGLAGCIAATGMDMWSTQDLYDNPVTSVFQYEGLWRSCVQQSSGF
TECRPYFTILGLPAMLQAVRALMIVGIVLGVIGLLVAIFALKCIRIGNMDDPSKAKMTLT
SGIMFIISGLCTIAGVSVFANMLVTNFWMSTANMYTGMGGMVQTVQTRYTFGAALFVGWV
AGGLTLIGGIMMCIACRGLAPEETNYKAVSYHASGHNVAYRPGGFKASTGFESSNKNKKI
YDGGARTEDEGQSHPSKYDYV
NT seq 786 nt   +upstreamnt  +downstreamnt
atgtccaccaccacatgccaagtggtgggcttcctgctgtccgtcctgggcctggcgggc
tgcatcgctgccaccggtatggacatgtggagcacccaggacctgtacgacaacccggtc
acctccgtgttccagtacgaggggctctggcggagctgtgtgcagcagagctcgggcttc
accgagtgccggccctacttcaccatcctgggcctgccagccatgctgcaggcagtacga
gccctgatgatcgtgggcatagtcctgggtgtcatcggcctcctggtggccatcttcgcc
ctgaaatgtatccgcattggcaacatggacgacccctccaaagccaagatgacactgacc
tcggggatcatgttcatcatctcaggtctttgcacaatcgctggagtgtctgtatttgcc
aacatgctggttactaacttctggatgtctacagctaacatgtacactggcatgggtggg
atggtgcagactgttcagaccaggtacacctttggtgcagctctgttcgtgggctgggtc
gctggaggtctgaccctcattgggggcataatgatgtgcatcgcttgccggggtctggcg
cccgaggaaaccaactacaaagccgtgtcttatcatgcctcgggccacaatgtcgcctac
cggcctggaggcttcaaagccagcactggctttgagtccagtaacaaaaacaagaagata
tacgatgggggtgcccgcacagaggatgagggacaatcccatccttccaagtacgactac
gtgtag

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