Sus scrofa (pig): 100302019
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Entry
100302019 CDS
T01009
Symbol
CLDN16
Name
(RefSeq) claudin-16
KO
K06087
claudin
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03272
Virion - Hepatitis viruses
ssc04382
Cornified envelope formation
ssc04514
Cell adhesion molecule (CAM) interaction
ssc04530
Tight junction
ssc04670
Leukocyte transendothelial migration
ssc05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100302019 (CLDN16)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100302019 (CLDN16)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100302019 (CLDN16)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100302019 (CLDN16)
09158 Development and regeneration
04382 Cornified envelope formation
100302019 (CLDN16)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
100302019 (CLDN16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100302019 (CLDN16)
04147 Exosome [BR:
ssc04147
]
100302019 (CLDN16)
Cilium and associated proteins [BR:
ssc03037
]
Other cilia and associated proteins
Stereociliary proteins
100302019 (CLDN16)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
100302019 (CLDN16)
Exosomal proteins of colorectal cancer cells
100302019 (CLDN16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF1118
Motif
Other DBs
NCBI-GeneID:
100302019
NCBI-ProteinID:
NP_001155116
UniProt:
A0A8D0QF72
LinkDB
All DBs
Position
13:127808599..127831081
Genome browser
AA seq
235 aa
AA seq
DB search
MRDLLQYVACFFALFSTGFLVVATWTDCWMVNADDSLEVSTKCRGLWWECVTNAFDGIRT
CDEYDSILAEHPLKLVVTRALMITADVLAGFGFIILLLGLDCVKFLPDEPYIKVRICFVA
GTTLLIAGAPGIIGSVWYAVDVYVERTSLILHNIFLGIQYKFGWSCWLGMAGSLGCFLAG
AVLTCCLYLFKDVGLERNYPYSMRKAYSTTAVSMAKSYVAPRTQTAKMYAVDTRV
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagggatcttcttcagtatgtcgcctgcttctttgcgcttttctctactggcttcttg
gttgtggccacctggacagactgttggatggtgaatgcagatgattccctggaggtgagc
acaaaatgccgaggcctctggtgggagtgtgtcacaaatgcttttgatgggattcgcacc
tgtgatgagtacgattctatacttgccgaacaccccttgaagctggtagtaacgcgggca
ctgatgattactgcagatgttctagctggatttggatttattatcctgctccttggtctt
gactgtgtgaaattcctccctgatgagccatacatcaaagtccgcatctgctttgttgct
ggaaccacattactaatagcaggtgccccaggaatcattggctctgtgtggtatgctgtc
gatgtttatgtggagcgtacttctctgattttgcacaatatatttcttggcatccaatac
aaatttggttggtcgtgttggcttggaatggctgggtctctgggttgctttttggctggt
gctgtcctcacatgctgcttatacctctttaaagatgttggacttgagaggaactatcct
tactccatgaggaaggcctattcaactacagctgtttcgatggccaagtcgtatgtggcc
cctcggacacagactgccaaaatgtatgctgtagacactagggtgtaa
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