KEGG   Sus scrofa (pig): 100302019
Entry
100302019         CDS       T01009                                 
Symbol
CLDN16
Name
(RefSeq) claudin-16
  KO
K06087  claudin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03272  Virion - Hepatitis viruses
ssc04382  Cornified envelope formation
ssc04514  Cell adhesion molecule (CAM) interaction
ssc04530  Tight junction
ssc04670  Leukocyte transendothelial migration
ssc05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    100302019 (CLDN16)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    100302019 (CLDN16)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100302019 (CLDN16)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    100302019 (CLDN16)
  09158 Development and regeneration
   04382 Cornified envelope formation
    100302019 (CLDN16)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    100302019 (CLDN16)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ssc03037]
    100302019 (CLDN16)
   04147 Exosome [BR:ssc04147]
    100302019 (CLDN16)
Cilium and associated proteins [BR:ssc03037]
 Other cilia and associated proteins
  Stereociliary proteins
   100302019 (CLDN16)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   100302019 (CLDN16)
  Exosomal proteins of colorectal cancer cells
   100302019 (CLDN16)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 DUF1118
Other DBs
NCBI-GeneID: 100302019
NCBI-ProteinID: NP_001155116
UniProt: A0A8D0QF72
LinkDB
Position
13:127808599..127831081
AA seq 235 aa
MRDLLQYVACFFALFSTGFLVVATWTDCWMVNADDSLEVSTKCRGLWWECVTNAFDGIRT
CDEYDSILAEHPLKLVVTRALMITADVLAGFGFIILLLGLDCVKFLPDEPYIKVRICFVA
GTTLLIAGAPGIIGSVWYAVDVYVERTSLILHNIFLGIQYKFGWSCWLGMAGSLGCFLAG
AVLTCCLYLFKDVGLERNYPYSMRKAYSTTAVSMAKSYVAPRTQTAKMYAVDTRV
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagggatcttcttcagtatgtcgcctgcttctttgcgcttttctctactggcttcttg
gttgtggccacctggacagactgttggatggtgaatgcagatgattccctggaggtgagc
acaaaatgccgaggcctctggtgggagtgtgtcacaaatgcttttgatgggattcgcacc
tgtgatgagtacgattctatacttgccgaacaccccttgaagctggtagtaacgcgggca
ctgatgattactgcagatgttctagctggatttggatttattatcctgctccttggtctt
gactgtgtgaaattcctccctgatgagccatacatcaaagtccgcatctgctttgttgct
ggaaccacattactaatagcaggtgccccaggaatcattggctctgtgtggtatgctgtc
gatgtttatgtggagcgtacttctctgattttgcacaatatatttcttggcatccaatac
aaatttggttggtcgtgttggcttggaatggctgggtctctgggttgctttttggctggt
gctgtcctcacatgctgcttatacctctttaaagatgttggacttgagaggaactatcct
tactccatgaggaaggcctattcaactacagctgtttcgatggccaagtcgtatgtggcc
cctcggacacagactgccaaaatgtatgctgtagacactagggtgtaa

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