KEGG   Sus scrofa (pig): 100302020
Entry
100302020         CDS       T01009                                 
Symbol
CLDN6
Name
(RefSeq) claudin-6
  KO
K06087  claudin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03272  Virion - Hepatitis viruses
ssc04382  Cornified envelope formation
ssc04514  Cell adhesion molecules
ssc04530  Tight junction
ssc04670  Leukocyte transendothelial migration
ssc05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    100302020 (CLDN6)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100302020 (CLDN6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100302020 (CLDN6)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    100302020 (CLDN6)
  09158 Development and regeneration
   04382 Cornified envelope formation
    100302020 (CLDN6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    100302020 (CLDN6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ssc03037]
    100302020 (CLDN6)
   04147 Exosome [BR:ssc04147]
    100302020 (CLDN6)
   04515 Cell adhesion molecules [BR:ssc04515]
    100302020 (CLDN6)
Cilium and associated proteins [BR:ssc03037]
 Other cilia and associated proteins
  Stereociliary proteins
   100302020 (CLDN6)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   100302020 (CLDN6)
  Exosomal proteins of colorectal cancer cells
   100302020 (CLDN6)
Cell adhesion molecules [BR:ssc04515]
 Immunoglobulin superfamily
  L1 family
   100302020 (CLDN6)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 GPDPase_memb
Other DBs
NCBI-GeneID: 100302020
NCBI-ProteinID: NP_001155117
Ensembl: ENSSSCG00000023743
UniProt: A0A4X1VT30 C3VML2
LinkDB
Position
3:39168506..39172631
AA seq 221 aa
MASAGLQILGIVLTLFGWVNALVCCALPLWKVTAFIGNSIVVAQVVWEGLWMSCVVQSTG
QMQCKVYDSLLALPQDLQAARALCVITLLVVLLGLLVYLSGAKCTTCVEDKDTKARLVLT
SGIIFVLSGVLTLIPVCWTAHAIIQDFYNPLVAEAQKRELGASLYLGWAASGLLLLGGGL
LCCTCPSGRSQGSSHYMARYSASAPHTASRGPSEYPTKNYV
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcctccgctggcctgcaaatcctggggatcgtcctgacgctgtttggctgggtgaat
gccctggtgtgctgcgccctgcccctgtggaaggtgaccgccttcatcggcaacagcatc
gtggtggcccaggtggtctgggaggggctgtggatgtcctgcgtggtgcagagcacaggc
cagatgcagtgcaaggtgtatgactcgctgctggcactgccccaggacctgcaggcagcc
cgtgccctctgtgtcatcactctcctcgtggtcctgctcggcctgctggtctacctctcg
ggagccaagtgcaccacctgcgtggaggacaaggacaccaaggcccgtctggtgctcacc
tctgggatcatcttcgtcctctcaggggtgctgaccctgatccccgtgtgctggacggca
cacgccatcatccaggacttctacaaccccctagtggctgaggcccagaagcgggagctg
ggagcctccctctacttgggctgggcggcctctggccttttgttgctgggtggtgggctc
ctgtgctgcacctgtccctcggggagatcccagggctccagccattatatggcccgatac
tcggcatcagccccacacactgcctctcggggtccctctgagtaccccactaagaattat
gtctaa

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