Sus scrofa (pig): 100312971 Help Entry 100312971         CDS       T01009                                  Symbol FDFT1 Name (RefSeq) squalene synthase   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism ssc  Sus scrofa (pig) Pathway ssc00100   Steroid biosynthesis ssc01100   Metabolic pathways Module ssc_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:ssc00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     100312971 (FDFT1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:ssc01006]     100312971 (FDFT1) Enzymes [BR:ssc01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      100312971 (FDFT1) Prenyltransferases [BR:ssc01006]  Terpene biosynthesis   Squalene/phytoene synthase    100312971 (FDFT1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY Octopine_DH Motif Other DBs NCBI-GeneID:  100312971 NCBI-ProteinID:  NP_001161120 Ensembl:  ENSSSCG00000026044 UniProt:  D0G6X3 LinkDB All DBs Position 14:14976259..15010701 Genome browser AA seq 417 aa AA seqDB search MEFVKCLGHPEEFYNLLRFQMGGRRKVIPKMNQDSLSSSLKTCYKYLNQTSRSFAAVIQA LDGEMRHAVCIFYLVLRALDTLEDDMTISIEKKIPLLHNFHLHLYESDWRFTESKEKDRQ VLEDFPTIALEFRNLAEKYQVVIVDVCRKMGFGMAEFLNKHVTSEREWDKYCHYDAGLVG IGLSRLFSASELEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQEGREFWPQEVWSKYV KKLGDFAKPENVDLAVQCLNELVTSTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATL AACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPDSDPYSAKTR QIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH NT seq 1254 nt NT seq  +upstreamnt  +downstreamnt atggagttcgtgaagtgcctggggcaccccgaggagttctacaatctgctgcgcttccag atggggggccggcggaaggtgatacccaagatgaatcaggactcgctcagcagcagcttg aaaacttgctacaagtatctgaatcagaccagtcgcagtttcgcagccgttatccaggcc ctggatggggaaatgcgccatgcagtgtgcatattttatctggttctccgagctctggac actctggaagatgacatgaccatcagtatagagaagaagatccccctgttacacaacttc cacttgcacctttatgagtctgactggcggttcactgagagcaaagagaaggaccgacaa gtcctggaggactttccaacgattgccctcgagtttagaaatctggctgagaaatatcaa gtggtgatagttgacgtttgccggaagatgggattcgggatggcagagtttttgaataag cacgtgacatcagaacgggagtgggacaagtactgtcactacgatgctgggctggtggga attggcctttcccgtctattctcagcctcagagttagaagatcccttggtgggtgaagac acagagcgtgccaactccatgggcctgttcctgcagaaaacaaacatcatccgtgattat ctggaagaccagcaagaaggaagagagttttggcctcaagaggtttggagcaagtatgtt aagaagttgggtgactttgcaaagccagagaacgtggacttggccgtgcagtgcctgaac gagctagtcaccagtacactgcaccacatccccgacgtcatcacgtacctttcacgactt agaaaccagagcatatttaacttctgtgctatcccacaggtcatggccattgctactttg gctgcctgttataataatcagcaggtgttcaaaggggtggtgaagattcgaaaagggcaa gcagtcaccctgatgatggatgccaccaacatgccagctgtcaaagccataatacaccag tacatggaagagatttatcacagaatccccgactcggacccttattcggccaaaacaagg cagatcatctccaccatcaggacacagaatcttcccaattgtcagctgatctcccgaagc cactactcacccatttacctgtcattcgtcatgctgctggcggccctgagctggcagtac ctgagcaccctgtcgcaggtcacagaggactacgttcagactggggagcactga

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