Sus scrofa (pig): 100329128
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Entry
100329128 CDS
T01009
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04068
FoxO signaling pathway
ssc04110
Cell cycle
ssc04120
Ubiquitin mediated proteolysis
ssc04150
mTOR signaling pathway
ssc05169
Epstein-Barr virus infection
ssc05200
Pathways in cancer
ssc05203
Viral carcinogenesis
ssc05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100329128 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100329128 (SKP2)
04150 mTOR signaling pathway
100329128 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100329128 (SKP2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100329128 (SKP2)
05203 Viral carcinogenesis
100329128 (SKP2)
09162 Cancer: specific types
05222 Small cell lung cancer
100329128 (SKP2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100329128 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100329128 (SKP2)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100329128 (SKP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
DUF7885
LRR_At5g56370
LRR_R13L1-DRL21
LRR_8
F-box_5
Motif
Other DBs
NCBI-GeneID:
100329128
NCBI-ProteinID:
NP_001165226
Ensembl:
ENSSSCG00000016835
UniProt:
D2DGZ0
LinkDB
All DBs
Position
16:21463270..21500925
Genome browser
AA seq
424 aa
AA seq
DB search
MHRKHLQEIPDQSSNVTTSFTWGWDSSKTSELLSGMGVSALEKEEVDSENIPQELLSNLG
HPQSPPRKRLKSKGNEKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLCLPELLKV
SSVCKRWYHLAFDESLWQTLDLTGRNLHPDVTGRLLSRGVVAFRCPRSFMDQPLVEHFSP
FRVQHMDLSNSVIDVSTLHGLLSQCSKLQNLSLEGLRLSDPIVNNLAQNTNLVRLNLSGC
SGFSESALKTLLSSCSRLDELNLSWCYDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS
DVSTLVGRCPNLVHLDLSDSVMLKNDCFQEFYQLNYLQHLSLSRCYDIIPETLLELGEIP
TLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQK
PSCL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggaagcacctccaggagattcccgaccagagtagcaacgttaccaccagcttc
acatggggatgggattctagcaagacttctgaactgctttcaggcatgggggtctctgcc
ttggagaaggaggaggtggacagtgagaacatcccccaggaactgctttcaaacctgggc
cacccgcagagccctccacgaaaacggctgaagagcaaagggaatgaaaaggactttgtg
atcgtccgcagacctaagctaaatcgagagaactttccaggtgtttcatgggactccctt
ccagatgagctgctcttaggaatcttttcctgtctatgcctccctgagctcctgaaagtc
tccagcgtttgtaaaagatggtatcatctagcgtttgacgagtctctctggcagacctta
gacctcacaggtaggaacctccacccagatgtgactggtcggctgctgtctcgaggggtg
gttgccttccgctgtccacgatcatttatggaccaaccgctagtcgaacatttcagccct
tttcgtgtacagcacatggacttgtcaaactctgtgatcgatgtgtctaccctccacggc
cttctgtcccagtgctccaagttgcagaatctcagcctggaaggcctgcggctttcggat
cccattgtcaataatcttgctcagaacacaaatttagtgcgactaaacctttctgggtgt
tctggattctccgaatctgccctaaagaccttgctgagcagctgttccagattggatgag
ctgaacctctcctggtgttatgacttcactgaaaagcacgtgcaggtggctgttgcacac
gtgtcagagaccatcacccagctgaatctcagcggctaccgaaagaatctgcagaaatca
gatgtctccaccttagttggaagatgtcccaatctggtccacctagatttaagtgacagt
gtcatgctgaagaatgactgctttcaggaattttaccagctcaactacctccaacaccta
tccctcagtcgatgctatgacataatacccgaaactttactggaacttggagaaattccc
acactaaaaacactacaagtctttggaatcgtgccagacggtacccttcaactgttaaaa
gaagcccttcctcatctacagattaattgttcccattttaccaccattgccaggccaacc
atcggcaacaaaaagaaccaggagatatggggcatcaaatgccgactgacactgcagaag
cccagttgtctatga
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