Sus scrofa (pig): 100329221
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Entry
100329221 CDS
T01009
Symbol
PPARGC1B
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04931
Insulin resistance
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09167 Endocrine and metabolic disease
04931 Insulin resistance
100329221 (PPARGC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ssc03029
]
100329221 (PPARGC1B)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
100329221 (PPARGC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CDC45
Htt_C-HEAT
Motif
Other DBs
NCBI-GeneID:
100329221
NCBI-ProteinID:
XP_020940667
Ensembl:
ENSSSCG00000014437
UniProt:
F1RL90
A0A8D0ZMX2
LinkDB
All DBs
Position
2:150823338..150924871
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AA seq
1028 aa
AA seq
DB search
MAGNDCGALLDEELSSFFLNYLADAQSGVSGEEQLCADFPELDLSQLDVGDLDSATCFEE
LQWCPESAEADPSQYSPRDAELFQIIDSENEALLAALTESLGDIPEDDVGLAAFPALDDG
DSPSCASASPAPSSAPPSPAPEGAPGPAPEAEELSLLQKLLLAASSPTLTSDSQKEGTAW
RQAGLRSRSQRPGVKTDSTQDRKAPTSQPQSRACTELHKHLTSAPSCPRAKAHSPDRGPP
PPPAPSPRLPAKEDEEAGEDCPSPRPAPASPRDSVAPGKAGPGAQVPQEDAQAMVQLIRY
MHAYCLPQRKLPARAPEPAPQACRSLSKAARPGPRPPHPPKAAWPEFSILRELLAQDVLC
DVSKPYRLATPVYASLAPRPRDSPASAGHPSPVEEVRVAASPRSSGPRPSLRPLRLEVRG
HLGRAARPQPEEEEEDEEEEEEEEDEKEDEEDEDEDEEEWGRRRPGRGLPWAKLGRKREG
SVRPVRRSRRLNPELGPWLTFTDEPPAPEQPRGALSSLRLAPDACDVEGALGTPTHEDSG
QDRQLPRGPQIPALESPCESGCGDTEEDPSCPQLPSRDSPRCLMLALSQSPTSDPPFGKK
NCEQTLAVELCGTAGLTPPTTPPYKPADEELFKPDVKHSPGRDAAPRLPPEGLPLGAAAG
AAHTLPKKHPERRELLSHLRHVTAPPASQAGHKRPFSCSFGDHDYCQVLKPEGALQRKVL
RSWEPSGAPPEDWPQQGAPRAEAQASGREEGSGCDIGAASKDSALLRDHEIRASLTKHFG
VLEAALEDEDRASCKSPEYDAVFEDGSSSSGGESGFLLEEEEEDDEEEDSGVSPPRSDHC
PYQSPPGKAGRQPCSRSRSSSSSSSCRSRSPATRRTFRCESRGPCSDGTPGGRHARKRRE
KAIGEGRVVYIRNLASDMSSRELKRRFEVFGEVVECQVLTRSTRGEKCGFVTYRRSEHAA
LSLRKGAALRGRSEPSFPLSSGGLRRFCWPRYADFDANSEEAPPASVKTKYEAMDFDSLL
REAQQSLH
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaacgactgcggcgcgctcctggacgaagagctctcctccttcttcctcaac
tatctcgccgacgcgcagagtggggtgtccggggaggagcaactctgcgctgattttccg
gagctcgacctctcccagctggacgtcggcgacttggactcggccacctgcttcgaggag
ctgcagtggtgcccagagagcgccgaggcggaccccagccagtacagcccccgcgacgcc
gagctctttcagatcatcgacagcgagaacgaggcgctgctggcggccctcacggagagc
ctgggtgacatccccgaagatgacgtgggtctggccgccttcccagccctggacgatgga
gactcaccctcctgcgcgtccgcgtcgcccgccccctcctctgcgccccccagccccgcc
ccggagggggcccccggcccggcccctgaggcggaggagctctcgctgctgcagaaactc
ctcctcgccgcgtcctccccgaccttgacctccgactcccagaaggaggggaccgcctgg
cgccaggcaggcctccggtcccgaagccagcggcctggtgtcaagacggacagcacccaa
gacaggaaggcccccacgtcgcagcctcagagccgggcctgcacggagctgcataagcac
ctcacctcggcgccctcctgcccccgggctaaagcccactcccccgataggggcccgcca
ccgccacccgccccgagtccccggctgccggccaaggaggacgaggaggcaggcgaggac
tgcccgagcccccgcccggctccagcctctccccgggactctgtagcgccaggcaaggcc
ggccccggcgcccaggttccccaggaggacgcgcaggccatggtgcagctcattcgctac
atgcatgcctactgcctcccgcagaggaagctgcccgctcgggccccagagccagccccc
caggcctgccgcagcctctccaaggcggccaggcccgggccgcggcccccgcacccgccc
aaggccgcctggcccgagttctccatcctgagggaactgctggcccaagatgtcctctgt
gatgtcagcaagccctaccgcctggccacgcctgtctacgcctccctcgcgccccggccc
cgagacagcccggcctccgcaggccacccgtcccccgtggaggaggtgagggtcgcggct
tcacccaggagctccgggcccagacccagcctgcgtccgctgcggctggaagtgagaggg
caccttggccgggcggccaggccgcagccagaggaggaagaggaggacgaagaggaggag
gaggaggaggaagacgagaaggaggacgaggaggacgaggacgaggacgaggaggagtgg
ggccggagaaggccgggccgaggcctgccgtgggccaagctggggaggaagcgcgagggc
tccgtgcgccccgtgcggcgctccaggagactgaaccctgagctgggcccctggctgacc
ttcactgatgagccgccggctcccgagcagccccgaggggctctgtcctcgctgcgcctg
gcccccgatgcctgcgacgtggagggggcgctgggcacccccacgcacgaggacagtggc
caagaccggcagctcccacggggaccccagatcccggccctggagagcccctgtgagagc
gggtgtggggacacggaggaggaccccagctgcccgcagctcccttccagagactctccg
aggtgcctcatgctggccttgtcgcaaagccccaccagtgaccctccttttggcaagaag
aactgcgagcagaccttggcagtggagctgtgtggcacggcaggactcaccccgcccacc
acgcctccgtacaagcccgcggatgaggagctcttcaagccggacgtcaagcacagcccg
ggccgagacgcggctcctcgcctccccccggagggcctcccgctcggggccgccgcgggc
gctgcccacacgctgccaaagaagcacccagagcggcgcgagctcctgtcccacctgcgg
cacgtcaccgccccgccagcctcccaggctggtcacaagcgccccttctcctgctcgttt
ggtgaccacgactactgccaggtgctcaagcccgaaggcgcccttcagaggaaggtgctg
cggtcttgggagccgtctggggctccccccgaggactggccccagcaaggcgccccgcgg
gctgaggcgcaagcctccggcagggaggaaggcagcggctgcgacatcggggccgccagc
aaggacagtgcgctgctgagagaccacgagatccgcgccagcctcaccaagcactttggg
gtcctggaggcggccctggaggacgaggaccgggcctcctgcaagagccccgagtacgac
gcggtcttcgaggacggcagcagcagcagcggcggcgagagcggcttcctcctggaagag
gaggaggaggacgatgaagaagaggactcgggggtcagcccccctcgctccgaccactgc
ccctaccagagccccccgggcaaggccggtcggcagccctgctcccgcagccgctccagc
tccagctcgtcatcctgccgctcccggtcaccggccacacgaaggaccttcagatgtgag
agcagagggccgtgttcagacggaacgccaggcggccggcacgccaggaagcggcgggaa
aaggccattggcgaaggccgcgtggtgtacattcgcaatctcgccagcgacatgagctcc
cgcgaactgaagaggcgcttcgaggtgtttggcgaggtcgtggagtgccaggtgctcacc
aggagcacgagaggcgagaagtgcggcttcgtcacctaccggcgctccgagcacgcggcg
ctgtccctgcggaagggcgcggccctgcgggggcgcagcgagccctccttcccgctgagc
tccgggggcctccggcgcttctgctggccccgctacgccgacttcgatgccaactcggaa
gaggccccgcctgcatccgtgaaaaccaagtacgaagccatggatttcgacagcttgctg
agggaggcccagcagagcctgcactga
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