Sus scrofa (pig): 100337660
Help
Entry
100337660 CDS
T01009
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100337660 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssc04147
]
100337660 (COPB1)
Membrane trafficking [BR:
ssc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100337660 (COPB1)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100337660 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
100337660
NCBI-ProteinID:
NP_001165837
UniProt:
D2SW95
LinkDB
All DBs
Position
2:44761072..44799063
Genome browser
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTKMGTYATQSALSSSRPTKKEEERP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKRQNSFVAEAMLLMATILHLGKSSP
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIIDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIQQGPEAPVTGHIRIRAKGQGMALSLGDKINLSQKKTSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgctgagaacgtctgctatacgttaattaacgtgccaatggattcagaacca
ccatctgaaattagcttaaaaaatgatctagaaaagggagatgtgaagtcaaagactgaa
gctttgaagaaagtaatcattatgattctaaatggtgaaaagcttcctggacttctgatg
accatcattcgctttgtgctacctcttcaggatcacaccatcaaaaaattacttctggta
ttttgggaaattgttcctaaaacaactccagatgggagacttttacatgaaatgattctt
gtatgtgatgcatatagaaaggatcttcagcatcctaatgaatttataagaggatctact
cttcgttttctttgcaaattgaaagaggcagaattgctagaacctttaatgccagctatt
cgtgcttgtctggagcatcggcacagctatgttagaagaaatgctgttttggccatctat
actatctatagaaattttgaacatctcatacctgatgctcctgaactgatacatgatttt
ctggtgaatgagaaggatgcaagttgcaaaaggaatgcatttatgatgttaatccatgca
gatcaggatcgagctttggattacctaagtacgtgtattgatcaagttcagacatttgga
gacattcttcagttggttattgttgaactaatttataaggtctgtcatgctaatccatca
gaaagggctcgtttcattcgctgcatctataacttactgcagtcctccagccctgctgta
aagtatgaagccgctggaacattagtgacactctctagcgcgcctactgcaatcaaggct
gctgctcagtgttacattgatttaattattaaggagagtgacaacaatgtaaagctcata
gttctggatcgattgatagaattaaaagaacatcctgctcatgaacgggtacttcaggat
ctagttatggacatcctaagagtattgagcacaccggacttagaagtacgcaagaaaact
ctgcagttagcactggatcttgtctcttctaggaatgttgaagagctggttattgtcctg
aagaaggaagtgattaaaacaaataatgtgtcagagcatgaagatactgataaatataga
caactccttgtgcgaacattgcattcctgttctgtccgatttccagatatggctgcaaat
gttattcctgtgttaatggaatttctcagtgacagtaatgaagctgcagctgctgatgtc
ttggagttcgttcgtgaagccattcagcgctttgataatctcagaatgcttattgttgag
aagatgcttgaagtctttcatgctatcaaatctgtcaagatttaccgaggagcgttatgg
atcctgggagaatactgtagcaccaaggaagacattcagagtgtgatgacggaggtccgc
aggtcccttggggagataccaattgtagagtcagaaattaaaaaagaagctggtgaatta
aaacctgaagaagaaataactgtggggccagttcagaaattggtaactaagatgggcacc
tatgctactcagagtgcccttagcagttctagacccaccaagaaagaggaagaaagacct
cctctaagaggattccttctggatggagatttctttgttgctgcctcacttgccacaact
ctgaccaagattgccttgcgctatgtagctttggttcaggaraagaaaaggcaaaattct
tttgttgctgaggcaatgttgctcatggccactatcctgcatttgggaaaatcctctcct
cctaagaagccaattacggatgatgatgtagatcgaatttccctgtgcctcaaagtctta
tctgaatgttcacctttaatgaatgacattttcaataaggagtgcagacagtcactttcc
cacatgttgtctgctaaacttgaagaagagaaattatcccaaaagaaagaatctgaaaag
aggaatgtgacagtacagcctgatgaccccatttccttcatgcaactaactgctaagaat
gaaatgaactgcaaggaagatcagtttcagctgagtttgctggcagcaatgggtaataca
cagaggaaagaggcagcagatcccctagcatctaaacttaacaaggtcactcaattgaca
ggtttctcagaccctgtatatgcagaggcttatgttcacgtcaaccagtatgatatcgtc
ctggatgtacttgttgtgaaccaaaccagtgataccttgcagaactgcacgttagagtta
gctactctgggagatctgaaacttgtggaaaagccatctcctttgactcttgctcctcat
gattttgcaaatattaaagcgaatgtcaaagtagcatcaacagaaaatgggataatcttt
ggtaatatagtttatgatgtctctggagcagcaagcgacagaaattgtgtggtcctcagt
gatattcacattgacatcatggactatatccagcctgcaacttgcactgatgccgaattc
cgtcagatgtgggccgaatttgagtgggaaaacaaagtgacagttaacacaaatataatt
gatttgaatgactacttacagcacatattaaagtcgaccaacatgaaatgcctcactcca
gagaaggcactttctggttattgtggctttatggcagccaacctctatgctcgttccatc
tttggagaagatgcacttgctaatgtcagcatcgaaaagccaattcagcagggaccagag
gcccctgttactggccacataagaattcgtgcaaagggtcagggaatggccttaagtctt
ggagataaaatcaacttgtctcagaagaaaactagtatataa
DBGET
integrated database retrieval system
