Sus scrofa (pig): 100462758
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Entry
100462758 CDS
T01009
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04136
Autophagy - other
ssc04140
Autophagy - animal
ssc05010
Alzheimer disease
ssc05014
Amyotrophic lateral sclerosis
ssc05016
Huntington disease
ssc05017
Spinocerebellar ataxia
ssc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100462758 (WIPI1)
04136 Autophagy - other
100462758 (WIPI1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100462758 (WIPI1)
05014 Amyotrophic lateral sclerosis
100462758 (WIPI1)
05016 Huntington disease
100462758 (WIPI1)
05017 Spinocerebellar ataxia
100462758 (WIPI1)
05022 Pathways of neurodegeneration - multiple diseases
100462758 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100462758 (WIPI1)
03029 Mitochondrial biogenesis [BR:
ssc03029
]
100462758 (WIPI1)
Membrane trafficking [BR:
ssc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
100462758 (WIPI1)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100462758 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_NWD2_C
WDR55
Beta-prop_HPS5
Beta-prop_VPS8
ANAPC4_WD40
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_RSE1_2nd
EIF3I
DUF5711
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
100462758
NCBI-ProteinID:
NP_001177223
Ensembl:
ENSSSCG00000017260
UniProt:
D7RA30
A0A8D1DEX1
LinkDB
All DBs
Position
12:11715332..11752009
Genome browser
AA seq
446 aa
AA seq
DB search
MEAEAAGRPPGRVEAALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTILDIPANPTGLCALSINHSNSYVAYPGSLTTGEIVLYDGHSLKTLC
TIAAHEGTLAAIAFNAAGSKLASASEKGTVIRVFSVPEGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLTNSRPEEPSTWSGYMGKMFLAASNYLPAQVSDMMNQ
DRAFATGRLHFSGQRNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGDCVLIKTHSLL
GSGTTEENKENDLKPSLPQSYAATVARPSPSSASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGNQKGKTKQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggccgcgggccgccccccaggcagggtcgaggcggcgctcagctgcttc
tctttcaaccaggactgcacatcccttgccattggaaccaaagccggttataagctgttc
tctttgagttctgtagagcaactggaccaagtccacgggagcaatgaaatcccagacgtc
tacatcgtggagcgcctcttctccagcagcctggtggtggtggtgagtcacacgaagccg
cgccaaatgaatgtctatcacttcaagaaaggcacggagatctgtaattacagctactcc
agcaacatcctgtccatcaggctgaaccggcagaggctgctcgtctgcctggaggagtct
atttacattcacaacattaaagacatgaagctgttgaagaccatcctggatattcctgca
aacccaacaggtctgtgcgccctctctatcaaccattccaattcttacgtggcctatcct
ggaagcctgacgacaggagagattgtgctgtacgatggacactccctgaaaacactctgc
accattgctgcccatgaggggacactggctgccatcgccttcaatgccgccggctccaaa
ctggcgagcgcgtcggagaagggcactgtcatccgggtgttctcggtacccgaagggcaa
aagctctatgagtttcggagaggaatgaaaaggtatgtgaccatcagctctctggttttc
agtatggattcccagttcctctgtgcttcaagcaacacagaaactgtgcacatcttcaag
ctggaacacctcaccaacagccggccggaggagccttccacctggagcggctacatgggg
aagatgttcctggccgcgtccaactacctccccgcccaggtgtccgacatgatgaaccag
gaccgggcctttgccaccgggcgtctgcacttctccgggcagaggaacatctgcacgctg
tccacgatccagaaattgcccaggctcttggtcgcatcctccgatggacacctgtacatc
tacaatttggaccctcaggacggaggagactgtgtcctaatcaagacccacagcttgctt
ggctcaggaaccaccgaagagaataaagaaaatgacctcaaaccttcattacctcagtct
tacgccgccactgtagccagaccaagcccgtcttcggcctccacggtgccaggttattcc
gaggacggcggggcgctccgaggagaggttattcccgaacacgagtttgcgacgggacca
gtgtgtcttgatgatgagaatgaattcccccctataatcttgtgccgcggaaatcagaag
ggcaaaacgaagcagtcatga
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integrated database retrieval system
