Sus scrofa (pig): 100462759
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Entry
100462759 CDS
T01009
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04136
Autophagy - other
ssc04140
Autophagy - animal
ssc05010
Alzheimer disease
ssc05014
Amyotrophic lateral sclerosis
ssc05016
Huntington disease
ssc05017
Spinocerebellar ataxia
ssc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100462759 (WIPI2)
04136 Autophagy - other
100462759 (WIPI2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100462759 (WIPI2)
05014 Amyotrophic lateral sclerosis
100462759 (WIPI2)
05016 Huntington disease
100462759 (WIPI2)
05017 Spinocerebellar ataxia
100462759 (WIPI2)
05022 Pathways of neurodegeneration - multiple diseases
100462759 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100462759 (WIPI2)
03029 Mitochondrial biogenesis [BR:
ssc03029
]
100462759 (WIPI2)
Membrane trafficking [BR:
ssc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
100462759 (WIPI2)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100462759 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
Beta-prop_RSE1_2nd
Beta-prop_Vps41
BCAS3_WD40
DUF7099
Beta-prop_IFT140_1st
RMC1_N
VID27
Motif
Other DBs
NCBI-GeneID:
100462759
NCBI-ProteinID:
NP_001177224
Ensembl:
ENSSSCG00000007580
UniProt:
A0A4X1TLW8
D7RA31
LinkDB
All DBs
Position
3:3800170..3830973
Genome browser
AA seq
436 aa
AA seq
DB search
MNLASQSGEAGASQLLFANFNQDVTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVRLNRQRLVVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGMFLSASSNTETVHIFKLETVKEKPQEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICALATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHKLDGS
METTNEILDSTSHDCPLVAQAYGTAAAKGAPVPSSPTALAYTDELGAAGGAGLEDEASAL
RLEEDSEQPPMILRTD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagtcagagcggcgaggccggcgccagccagctgctcttcgccaacttc
aaccaggacgtcacgtctctagctgttggtagtaaatccggttataaatttttctccctt
tcttctgtggataaactggaacagatctatgaatgcactgacacggaggacgtgtgcatc
gtggaaaggctcttctctagcagcttggtggccatcgtcagcctcaaagctccccgcaag
ctgaaggtctgccacttcaagaagggcactgagatctgcaactacagctactccaacacc
atcctggccgtgaggttgaacaggcagcggctggtcgtgtgcctcgaggagtctctgtac
atccacaacatccgggacatgaaggtgctgcacaccatccgggagacgcccccgaacccc
gcaggcctgtgtgcgctgtccataaacaacgacaactgctacctggcgtaccccggcagc
gccaccatcggggaggtgcaggtcttcgacaccatcaacctgagagctgcgaacatgatc
ccggctcacgacagcccgttagccgccctggccttcgacgccagtggaaccaagctcgcc
actgcttccgagaaggggaccgtgattcgggtgttttccattccagaaggacagaagctc
ttcgagttccggagaggcgtgaagaggtgtgtgagcatctgctccctggccttcagcatg
gacggcatgttcctgtccgcgtccagcaacaccgagactgtgcacatcttcaaactcgag
actgtgaaggagaaacctcaggaggagcccaccacctggacgggctacttcgggaaggtg
ctcatggcttccaccagctacctgccctcccaggtgacagaaatgttcaaccagggcaga
gcctttgccaccgtccgcctgcctttctgtggccacaagaacatctgcgcgctggccaca
atccagaagattccgcgactgctggtgggagcctctgacgggtacttgtacatgtacaac
ctggacccccaggagggcggcgagtgcaccctgatgaaacagcacaagctggacggcagc
atggagaccaccaacgagatcctggactccacgtctcacgactgccccctggtggcgcag
gcctacggcacggctgcggccaagggtgcgccggtgccttcatccccgaccgcacttgcc
tacacggacgagctgggcgcagcgggcggcgcgggtctggaggacgaggccagcgccctg
cggctggaggaggacagcgagcagcctcccatgattctgcggacggactga
DBGET
integrated database retrieval system
