Sus scrofa (pig): 100510970
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Entry
100510970 CDS
T01009
Symbol
CC2D2A
Name
(RefSeq) LOW QUALITY PROTEIN: coiled-coil and C2 domain-containing protein 2A
KO
K19352
coiled-coil and C2 domain-containing protein 2A
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100510970 (CC2D2A)
Cilium and associated proteins [BR:
ssc03037
]
Primary cilia and associated proteins
MKS complex
100510970 (CC2D2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5523
CC2D2AN-C2
CEPT76_peptidase
CEP76_C
C2
Motif
Other DBs
NCBI-GeneID:
100510970
NCBI-ProteinID:
XP_003128908
Ensembl:
ENSSSCG00000008738
LinkDB
All DBs
Position
8:10779206..10898189
Genome browser
AA seq
1620 aa
AA seq
DB search
MGPKEEKVKIITEEFIEDGEDAGAGRQKKTPKVPRQKRKKQLPEAGPEEMVSETPRLDEE
QEPGQEGSDARLLGSKTRRGQRSLPPIPSASRTGFAEFSMRERMREKLQAARSKAESALL
QEIPXPRPRRLRSPGEKEVETEFGTEPGGETQRAQPEDDSQGHSRVKFHDSVRKIKSKPT
VPPGFPSAEEAYNFFTFNFDPEPEDSEEKPRAKNRDGTNQEEKEGEEEEPPVQEGVNQTD
EEELLEGKDAEDLLLGLDQAAEDFVAVRPADYESIHVQLQMEKELLFIPSRLTVPTYKKL
PENVQPRFLEDEGLYIGVRPEVPRTNQNIMENRLLTQDPGRRWFGDDGRILALPNPIKPF
PSRPPVSPREQDLKAELETLYKKAVKYVHRSQHMIGAGDLPGNFQLDIDISGLIFTHHPC
FSREHVLAAKLAQLYDQYLARRQRNKAQFLTDKLQALRNAVHMGLHPAKAPKSLETTSKA
INEYKSEIRQTRKLRDAEQEKDRALLKTIIKVWKEMKSLREFQRFTNTPLKLVLRKEKVD
QRAEDEAYEAEIQAEISELLEEHAEEYERKMEEYRAAQQQWKAWKKAQRAKKKKKKQAAE
EHADEEMEEPDPGEEPVKPIPPEPMDRAVLEQQVRERAAQSRRRPGEPTLVPELSLAGSV
TPNDQCPRVEVLRREDVRRRSVHLKVIFNNKEVSRTDSRPLGXDFRVHFGQIFNLQIFNW
PESLTLQVYETIGHSGTSLLAEVFLPIPETTVVTGRAPVEEVEFSSNQHVTLDHEGVGSG
VPFSFEADGSNQLILMTSGKVANSVAWAIGENGIPLIPPLSQQNIGFRSALKRADAISSI
GTSGLTDMKKLAKWAAESKLDPNDPSNGPLMQLISVATSGESYVPDFFRLEQLQQEFNFV
SDEELNRSKRFRLLRLRSQEVPEFRNYKQIPIYDREIMEKVFQDYEKRLRDRNVIETKDH
IDTHRAIVAKYLQQVRESVINRFLIAKHHFLLSDLIVEEEVPSISILGLSLFKLAEQKRP
LRPRRKGRKKVTAQNLSDGDIKLLVNIIRAYDIPVRKPTTSKFQQPSRSSRTFGEKHAAS
PTTHSPTHSADYPLGQVLVRPFVEVSFQRTICHTTTAEGPNPSWNEELELPFRAPNGDYS
TTSLQSVKDDVFINIFDEVLYDVLEDDRERGSGIHTRIERHWLGCVKIPFSTIYFQARID
GTFKIDIPPVLLGYSKERSVTADRGFDPVRSLSAGSYLTLFITLEPQLVPGESVREKFDS
QEDEKLLQAAEKFQAECALKFPNRQCLTTVIDISGKTVFITRYLKPLNPPQELLGAYPNN
PQATAELVARYVSLIPFLPDTVSFAGICDLWSTSDQFLDLLAGDEEEHAVLLCNYFLSLG
KKAWLVMGNAIPEGPTAYVLTQEQSHYLIWNPCSGHFYGQFDTFCPLKSVGCLIGPDNIW
FNIQRYDSPLRINFDVTKPKLWKSFFSRSLPYPGLSSVQPEELIYQRTDKVAAAELQDRI
EKILKEKIMDWRPRHLTRWNRYCTSTLRHFLPLLERNQGEDVEDDHRAELLRQLGDYRFS
GFPLHMPYSEVKPLIEAVYSTGVHNIDAPNVEFALAVYIHPYPKNVLSVWIYVASLIRNR
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccaaggaagaaaaagtgaaaatcattacagaggagtttattgaagacggtgag
gatgcaggtgcaggaagacagaagaagaccccaaaggtgccaagacaaaaaagaaagaaa
cagctgccagaggctggccccgaggaaatggtgtctgaaacaccccgtctggacgaggaa
caggagccggggcaggaaggttctgatgcgcgcctcctgggctcgaagacccgacgaggc
caacggagcttacctccaattccttcagcttccagaacaggctttgccgaattttccatg
agagaacgcatgagggagaagttacaagctgccaggtccaaagcagaaagcgcgttgctg
caagaaatccccncgcctcggcccaggcgcttacgaagtcctggtgagaaagaagtggag
acagagtttggcacagagccgggtggagagacgcaaagggctcaacccgaagatgactcc
caaggtcattcaagagtcaagttccacgattctgtacgaaaaatcaagtctaaacccacg
gttccgcctggcttcccttctgctgaggaagcctataacttctttactttcaactttgat
cccgaaccggaggactcagaggaaaaaccaagagcaaaaaatagagatggaactaaccaa
gaggagaaggaaggagaggaagaagagccacctgtgcaagaaggagtaaaccaaacggat
gaggaagaactgcttgaaggcaaagatgctgaggatctcctgctgggcttggaccaggca
gctgaagattttgtggcagttagacccgcagattatgaaagcatccatgttcagctgcag
atggaaaaagaactcctgttcatacccagcagactgacagtgcctacgtataaaaagctt
ccagagaatgtgcagcccaggttcctggaagacgaaggcctttacatcggggtgcgaccg
gaggtgcctcgaaccaaccagaacatcatggagaacaggctgctgacgcaggatccgggg
aggcggtggttcggtgatgatggcagaatcctagctctgcccaaccccatcaagccgttt
ccttcacgcccacctgtgtcaccacgggagcaggaccttaaggcagaactggaaacgctg
tataaaaaggcagtaaagtatgtccacagaagtcagcatatgattggagccggagacctt
cctggaaatttccaactggacattgatatttcagggctaatcttcacgcatcatccctgt
ttcagccgagagcatgttttggcagccaagctggcccagttatatgaccagtaccttgca
agacgccagagaaacaaggcacaatttctaactgataagctccaagctctgagaaatgct
gttcacatgggccttcatccagcaaaagctcctaagtctcttgaaacaacctccaaagcc
atcaatgagtataaatctgaaattcggcagacaagaaaactgcgtgacgctgaacaagag
aaagatcgagcattgcttaagaccatcataaaagtttggaaagagatgaaatcccttcga
gagttccagaggtttacaaatacaccattgaaacttgttttgagaaaggaaaaagttgac
cagagagcagaggacgaagcatatgaagcagaaattcaggctgagataagtgaattgttg
gaagagcatgcggaagagtatgagcggaagatggaggaatacagagccgcacagcagcag
tggaaagcctggaagaaagcccagagggccaaaaagaagaaaaagaaacaagcagcggaa
gaacatgccgatgaggagatggaggagccagaccccggggaagagcctgtgaagcccatc
cctccggagcccatggaccgggctgtgctagagcagcaggtgagggagagggcagcccag
agccggaggaggcccggggagcccacgctggtcccagagttgagcctggcggggagcgtg
acacccaacgaccagtgtcccagggtggaggtcttgcgaagggaggacgtcaggaggcgc
tcggtgcacttgaaggtgatcttcaacaacaaggaagtgtccaggaccgacagtcggccg
ctcgggncagacttccgagttcacttcggacagattttcaatctgcaaatattcaactgg
ccggagagtttaacactgcaggtatacgaaaccattggacacagtggcaccagcttgcta
gcagaagtgtttctgcctattcctgaaactactgttgtcactggaagggctcctgttgaa
gaagtggagtttagcagtaaccagcacgtgaccctggaccacgagggcgttggaagtgga
gtccccttctcatttgaagctgacggtagtaatcaactgattctaatgacctcggggaaa
gtggccaacagtgtggcatgggccattggagaaaacgggattcctttaattcctccattg
tcacagcagaatattggatttagaagtgctttgaagagagcagatgccatctcgtctatt
ggcacatcaggactgacagacatgaaaaagttggccaagtgggcagcagagtccaagctt
gaccccaatgaccccagcaatggtcctttgatgcagctaatctcggttgctaccagtggt
gaatcgtacgtccctgatttctttcgactggagcagctacaacaggaatttaactttgtt
tcagatgaagaattaaacagatccaaacgattcaggcttcttcgtcttcgaagccaagaa
gtgccagaattccgaaattataagcaaattccaatatatgaccgagaaattatggaaaag
gtattccaggactatgagaaacggttacgagacagaaatgtaattgaaaccaaggaccac
atagatacccatagggccatagtggccaagtacctccagcaggttagagaatctgtgata
aatcgttttctcattgcaaaacaccattttcttctttcggatttgatagtcgaagaagaa
gttcccagtatcagcattttggggctgagccttttcaaactggcggaacaaaagcgacca
ctgaggcccaggagaaaaggtcggaagaaggtcacagcccagaatctgtccgatggagac
ataaagctgctggtgaacattatccgggcttatgacattccagtgaggaagccgacaacc
agcaaattccagcagccatcgagatcttcaaggacttttggcgaaaagcatgctgcttcc
ccaaccacacacagcccaacccacagtgctgactaccccctcggccaggttttagtacgt
ccttttgtagaagtttcatttcagcggacaatttgccatacaactacggccgaaggccca
aaccccagctggaatgaagaacttgaacttccatttagggcccccaacggggattatagc
accacgagtttgcagtcagtgaaagatgacgtgttcatcaacatttttgatgaagtgctc
tatgatgtcttggaggatgaccgtgaaagaggaagtggaatccacacccgcatcgagaga
cactggttgggatgtgtgaaaattccattcagcaccatctatttccaagccaggattgat
gggacatttaaaatcgacattcctccagttcttctgggctacagcaaggagcggagtgtg
acggcggatcggggctttgatcccgtccgaagcctgagtgcaggctcctacctcaccctg
tttattaccttggagccgcagctggttcccggggagtcggttcgagaaaagtttgattct
caggaagatgagaaattacttcaagcggcagagaagtttcaagctgaatgtgccttaaag
tttccaaatcgtcagtgcctgacaacagtgattgacattagtgggaaaacggtctttatt
acccgttatctcaagcctttgaaccctcctcaggagctccttggcgcctaccccaacaac
ccccaggcaacagctgaactcgtggctcgatacgtgtctttgatccctttcttgcctgac
actgtctcatttgccgggatctgtgacctgtggagcacatctgatcaatttcttgatctc
ctggcaggagatgaagaagagcacgcagtattactatgtaattattttctctccctgggt
aagaaggcctggctggtgatgggcaatgccattcctgagggtccaaccgcctatgtgctt
actcaggagcaaagtcactatttaatatggaatccttgcagtggacatttttatggacaa
tttgatacattctgccccttaaaaagtgtgggctgtttaataggtcccgataatatttgg
tttaatattcaacgatatgattccccactgaggattaattttgatgtcaccaagcccaag
ctatggaaatctttcttttcaagaagccttccatatcctggcctttccagtgttcagcca
gaagagctaatttaccagcggacagacaaagtggctgcagctgaactgcaagacaggatt
gaaaaaatactgaaagaaaaaatcatggactggaggccacgccatctgactcggtggaac
agatactgtacctccacgctgcgtcacttcctgcctctgttagaaagaaaccagggcgaa
gacgtggaagacgaccacagggcagaactgctcagacagctgggagactacaggttctct
ggatttccccttcacatgccatactctgaagtgaagcctttaatcgaagctgtgtacagt
actggggtacataatattgatgctcccaatgttgaatttgctttagctgtatacatccac
ccatatcccaaaaatgttttgtctgtttggatttatgttgcctcccttatacgcaacaga
taa
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integrated database retrieval system
