Sus scrofa (pig): 100511041
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Entry
100511041 CDS
T01009
Symbol
SMYD4
Name
(RefSeq) SET and MYND domain-containing protein 4 isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100511041 (SMYD4)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
100511041 (SMYD4)
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Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
TPR_2
TPR_19
ANAPC3
TPR_10
TPR_7
Motif
Other DBs
NCBI-GeneID:
100511041
NCBI-ProteinID:
XP_020923233
UniProt:
A0A8D1ZEJ2
A0A5K1VBK2
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Position
12:complement(47944220..48009606)
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AA seq
803 aa
AA seq
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MDLPVDEWKSYILQKWSLLPKSIQVTISTAEALSDIFLHSSLLLQPEDEMFLKRLSGGYL
VGKDPGAPLFYREEGNKKFHEKDYMGATLLYSKGVAHSRPSTEDISLCYANRSAALFHLG
QYETCLKDIVRAQSHGYPENLQPKMLLRKAECLVTLGRLQEASQTISDLESNFAATPTLA
ASQFQILQRTLCRLKRKVQEKETLTETFPALLTKALEDMELREENVHVRGASSSVSLRVD
PLKGRSLVATKDILPGELLVKEDAFVSVLNPGEMPPRHEGLESKWDTRVTNGDLYCHRCL
KPTLATVPCDGCSYAKYCSQECLQQAWDLYHSVECSLGGLLLTLGVFCHVALRSTLLARF
EDVGKVRMTLCGETCNRDVSSPEGKNLAQALSYDLGGEREQRGKTVETSVPGCGIDGKYE
NNYNAVFHLLPHTENHSPEHKFLCALSVSALGRQLQAAGSQPFTAGLKSSKLEAAEAPVL
YPEWNIWGVAMLRHMLQLQCNAQAITAIQQTGSKGSLITEHRQVRLATGLFPVVSLLNHS
CSPNASVSFISTVATVRASQPIRKGQEVLHCYGPHESRMGVAERHQKLRSQYFFDCNCPP
CEREKQRPSALEPRREAFCCHRCRALLQGDDVLSCGSTSCPASVRRHHLDSRLQDLQQQV
GLARKLLRNCKAERAIQLLLGCQHDAESFLSAEHSVVGEIADDLAQAYAALGDWKKSASH
LQKSLRVVEVRHGPSSVEMGHELFKLAQIFFNGLAIPEALNTIQRAEKVLLVHYGPWNDE
IQELQKMKSCLMDLLPIPMGPSE
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggatctgccggtggatgagtggaaatcatacatacttcagaagtggtctttgctcccc
aagtccattcaggtcacaatttctacagcagaggccctgagcgatatctttctccactca
tctttgcttcttcagcctgaggatgagatgtttttaaaaaggctttctggaggttacctt
gtaggaaaagacccaggtgctccccttttctacagagaagaaggaaacaaaaaattccat
gagaaggattatatgggagccacactactctactccaagggagtagcccattcaaggccc
agcactgaggacatttcgctgtgttatgccaaccgctctgcagccctcttccacctgggt
cagtatgaaacatgccttaaagacatcgtcagggcgcagtcgcatggatatccagaaaat
cttcaacccaagatgctgctgcgtaaggcagagtgtctggtgaccctggggagactacag
gaggcgagccagaccatcagtgaccttgagagtaactttgctgccacaccaaccctagca
gcttcccaatttcagattctgcagagaaccctctgtcgtctgaaaaggaaggtacaagaa
aaggagactctcacggaaaccttcccagcccttctcaccaaggccttggaggatatggag
ctgagggaagagaacgtgcacgtgcgcggtgcctcatcgtccgtcagcttacgcgtggac
cctttaaaaggccgctctctggtcgccacaaaagatatcctcccaggcgagcttctggtg
aaagaggatgcttttgtgagtgtccttaacccaggagaaatgccaccacgacacgaaggc
ctggagagcaagtgggacaccagagttaccaatggggacctttactgtcaccggtgtttg
aagcccacattggccacagttccctgtgatgggtgcagctatgccaagtattgcagccaa
gagtgtctgcagcaggcctgggacctctaccacagtgtggagtgttctcttggggggctg
cttctcaccctgggtgtcttttgccatgttgccctgaggtctacacttttagctagattt
gaggatgttggcaaagtcagaatgacgctttgtggtgagacgtgtaacagagacgtctct
tcccctgaaggcaagaatctggcacaagcactcagttatgacctgggaggagagagagag
caaagaggcaaaacagttgagacctcagttcctggatgtggtatcgatggaaagtatgaa
aataattataacgctgtcttccaccttttaccccatactgaaaaccatagtccagagcac
aaattcctctgtgcactaagtgtttctgcactgggcaggcagctccaagcagccggttca
cagcccttcacagcaggtctgaagtcatcgaagctggaagcagccgaggcccctgtgttg
tatcccgagtggaatatttggggagtggccatgctgagacacatgttacagctgcagtgt
aatgctcaggcaatcacggccattcagcagacaggatctaaagggagcctcattactgag
cacaggcaggtacgccttgccaccggcctcttccccgtcgtcagcctcctgaaccattcc
tgcagccccaacgccagcgtgtccttcatcagcaccgtcgccaccgtgcgggcatcacag
cccattcggaaggggcaagaggttctccactgctatgggcctcacgagagtaggatgggt
gttgctgagaggcaccagaagctgaggtctcagtatttctttgactgcaactgcccgcct
tgcgaacgagagaagcagagaccctcggcgttggaaccgaggagggaagccttctgctgt
caccgttgcagagctctcctgcagggagatgatgttctgagctgtggcagcacatcttgt
ccggcatcggtccgtaggcatcacctagactctcggctgcaagaccttcagcagcaggtg
gggctggcccggaagcttctccgaaactgtaaagcagaacgagccattcagctgttgttg
gggtgccaacacgatgctgagagcttcctgtcagcagaacacagtgtggtgggagaaatc
gcggatgacctggcccaggcctatgctgccttaggggactggaagaagtcagcgagccac
ctacagaagagtcttcgggtagttgaggttcgccacgggccgtccagtgttgagatgggc
catgagctcttcaaactggcccaaatcttcttcaatgggttggcaatccccgaagctctg
aacacaatccaaagagcagaaaaggttctgttggtgcactatggcccttggaatgatgag
atccaggagctccaaaagatgaaatcctgtttaatggacttgctgcccatccccatggga
cccagtgaatag
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