Sus scrofa (pig): 100511146
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Entry
100511146 CDS
T01009
Symbol
DSCAML1
Name
(RefSeq) LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100511146 (DSCAML1)
Cell adhesion molecules [BR:
ssc04515
]
Immunoglobulin superfamily
Other
100511146 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
Adeno_E3_CR1
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
100511146
NCBI-ProteinID:
XP_020918560
LinkDB
All DBs
Position
9:complement(44785142..45153256)
Genome browser
AA seq
2113 aa
AA seq
DB search
MTGAREPRREEPPPPPSAGLRSRESGARSAGGWERAERGRGAAARPATGPPPRRIGPLYG
MWLVTFLLLLDSLHKARPEDVGTSLYFVNDSLQQVTFSSSVGVVVPCPAAGSPSAALRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPNIRVK
AVFREPYTVRVEDQRSMRGSVAVFKCLIPSSVQEYVSVVSWEKDTVAIIPENRFFITYHG
GLYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWAG
HTVELPCTASGYPIPAIRWLKDGRPLPADSRWTKRITGLTISDLRTEDSGTYICEVTNTF
GSAEATGTLTVIDPLHVTLTPKKLKTGIGSTVILSCTLMGSPEFTIRWYRNTELVLPGEA
ISIRGLSNETLLITSAQKSHSGAYQCFASRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVN
PGEQFSLMCAAKGAPPPTVTWALDDEPIVRDGSHRSNQYTMSDGTTISHMNVTGPQIRDG
GVYRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYK
DALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQ
PFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVS
LKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPK
VMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKS
MFLTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIA
TKDNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKA
RSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSI
RMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIR
GYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSE
INATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWG
EMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAV
PSSASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQ
YLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMRDVRLPCNSVGDPAPA
VKWTKDSEDSAIPVSMDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLV
QVPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFVSSSERSF
RLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNL
QGWNNGGCPITAIVLEYRPKGTWAWQGLRANSSGEVFLTELREATWYELRMRACNSAGCG
NETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKR
LKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKA
TIPVTDAEFSQAVNPQSFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHST
RNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVS
TESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMST
PSEPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYAKSEAFFRKADGREPC
PVVPPREASIRNLARTYHPQARHLTLDPASKPLGLPHPGAPAAASTATLPQRTLAMPAPP
AGTAPPAPGPXPAEPPAAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQK
QGAGAYSKSYTLV
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagccagggagccgaggagggaggagccgccgccgccgccgagcgctgggctg
aggagcagagagagcggggcgcggagtgcgggcggctgggagcgcgctgagcgggggaga
ggcgctgccgcacggccggccacaggaccacctccccggagaatagggcctctttatggc
atgtggctggtaactttcctcctgctcctggactctttacacaaagcccgccctgaagat
gttggcaccagcctctactttgtaaatgactccttgcagcaggtgaccttttccagctcc
gtgggggtggtggtgccctgcccggccgcaggctcccccagcgcggcccttcgatggtac
ctggccacgggggacgacatctacgacgtgccgcacatccggcacgtccacgccaacggg
acgctgcagctctaccccttctccccctccgccttcaatagctttatccacgacaatgac
tacttctgcaccgcggagaatgctgccggcaagatccggagccccaacatccgcgtcaaa
gcagttttcagggaaccctacaccgtccgggtggaggatcaaaggtcgatgcgtggaagc
gtggccgtcttcaagtgcctcatcccctcttcagtgcaggaatatgttagcgttgtgtcc
tgggagaaagacacagtcgccatcatcccagaaaacaggttttttattacttaccacggc
gggctatacatctctgacgtgcagaaggaggacgccctctccacctaccgctgcatcacc
aagcacaagtacagcggggagacccggcagagcaatggggcccgcctctctgtgacagac
cctgccgaatcaatccccaccatcctggacggcttccactcccaggaagtgtgggccggc
cacaccgtggagctgccctgcaccgcctccggctaccccatccctgccatccgctggctc
aaggatggccgacccctcccggcagacagccgctggaccaagcgcatcacagggctgacc
atcagtgacctgcggaccgaggacagcggcacctacatttgtgaagtcaccaacaccttc
ggctcggcagaggccacaggcaccctcacggtcatcgacccccttcacgtgaccctaaca
ccaaagaagctgaagaccggcatcggcagcacggtcatcctttcctgcaccctgatgggc
tccccagagttcaccatccgctggtaccgcaacaccgagctggtgctgcccggcgaggcc
atctccatccgcgggctcagcaacgagaccctgctcatcacctcggcccagaagagccac
tccggggcctaccagtgcttcgccagccgcaaggcccagaccgcccaggacttcgccatc
atcgtgcttgaggacggcacgccccgcatcgtctcgtccttcagcgagaaggtggtcaac
cccggggagcagttctcactgatgtgcgcggccaagggtgccccgcctcccactgtcacc
tgggccctggacgacgagcccatcgtgcgggacggaagccaccgctccaaccagtacacc
atgtccgacggcaccaccatcagccacatgaatgtcacggggccccagatccgcgacggg
ggcgtgtaccggtgcaccgcacggaactcggtgggcagtgctgaatatcaggcgcgaata
aacgtaagaggcccccccagcatccgggccatgcggaacatcacggccgttgctgggcgg
gacacccttatcaactgcagggtcatcggctacccctactactccatcaagtggtacaag
gatgccctcctgctccccgacaaccaccgccaggtggtgttcgagaacggaaccctcaag
ctgactgacgtgcagaagggcatggacgaaggggagtatctgtgcagcgtcctcatccag
ccccagctctccatcagccagagcgtccacgtggccgtcaaagtgccccctctcatccag
cccttcgagttcccgcctgcctccatcggccagctgctctacatcccctgcgtggtgtct
tcgggggacatgcccatccgcatcacctggaggaaagacggacaggtgatcatctcaggc
tcaggcgtgaccatcgagagcaaggaattcatgagctccctgcagatctccagcgtctcc
ctcaagcacaatggcaactacacgtgcatcgccagcaacgcagcggccaccgtgagcagg
gagcgccagcttatcgtgagagtgccccctcgattcgtggtgcagcccaacaaccaggat
ggcatctatggcaaggctggtgtgctcaactgctcggtggatggctatcccccacccaag
gtcatgtggaagcatgccaaggggagtgggaacccccagcagtaccaccccgtgcccctc
acgggccgcatccagatcctgcccaacagctcgctactgattcgccacgtcctggaagag
gacatcggctactacctctgccaggccagcaacggcgtgggcactgacatcagcaagtcc
atgttcctcactgttaagatccccgccatgatcacctcccaccccaacaccaccatcgcc
atcaaaggccacgcaaaggagctcaactgcacggcgcggggagagcgacccatcatcatc
cgctgggagaagggggacacggtcatcgacccggaccgtgtcatgcggtatgccatcgcc
accaaggacaacggcgacgaagttgtctccacgctgaagctcaagcctgccgaccgtggg
gactctgtgttcttcagctgccacgccatcaactcatatggggaggatcggggtctgatc
cagctcaccgtgcaagagccccctgaccccccagagctggagatcagagaggtgaaggcc
cggagcatgaacctacgctggacccagagattcgacgggaacagcatcatcacgggcttt
gacatcgaatacaagaataaatcagattcctgggactttaagcaatctacccgcaacatc
tccccaaccatcaaccaggcaaatatcgtggacttgcacccagcgtctgtgtacagcatc
cgcatgtactccttcaacaagattggccgcagcgagccgagcaaagagctcaccatcagc
actgaggaggccgctcctgatgggccccccatggatgtaaccttgcagccagtgacttca
cagagcatccaagtgacatggaaggcacccaagaaggagctgcagaatggtgtcatccgg
ggctatcagatcggctaccgagagaatagccctggcagcaatgggcagtacagcatcgtg
gagatgaaggccactggggacagtgaggtctacaccctggacaacctcaagaagtttgca
cagtatggggtggtggtccaggccttcaatcgggctggcacagggccctcatccagcgaa
atcaatgccaccaccctggaggatgtgcccagtcagccccccgagaatgtccgggccctg
tccatcacttccgacgtggccgtcatctcctggtcggagcccccacgcagcaccctcaat
ggcgtcctcaaaggctatcgcgtcatcttctggtcactctacgttgatggcgagtggggc
gagatgcagaatatcaccaccacgcgggagcgggtggagctgcgaggcatggagaagttc
accaactacagcgtgcaggtgctggcctacacgcaggccggggacggcgtgcgcagcagt
gtgctctacatccagaccaaggaggatgttccaggtccccctgctggcatcaaagctgtc
ccttcatccgccagtagcgtggtcgtgtcctggctgcccccaaccaagcccaacggggtg
atccgcaagtacaccatcttctgctccagccccgggtctggccagccggctcccagcgag
tatgagacgagtccagagcagctcttctaccgcatcgcccacctaaaccgtgggcagcag
tacctgctatgggtggccgccgtcacctccgctggccgaggcaacagcagcgagaaggtg
accatcgagcctgctggcaaggccccggcaaagatcatctccttcgggggcaccgtaaca
acaccctggatgagagatgtccggctgccttgcaattcagtgggcgacccagcccctgct
gtgaagtggaccaaggacagcgaagactcggccatccccgtgtccatggatgggcaccgg
ctcatccacaccaatggcacgttgctgctgcgtgcagtgaaggctgaagactcaggctac
tacacctgcacagccaccaacaccgggggcttcgataccatcatcgtcaaccttctggtg
caagttcctccagaccagccccgcctcactgtctccaaaacctctgcttcgtccatcact
ctgacctggattccaggtgacaacgggggcagctccatccgaggcttcgtgctgcagtac
tcagtggacaacagcgaggagtggaaggacgtattcgtcagctcaagtgagcggtccttc
aggctagacagcctcaagtgtggcacgtggtacaaggtgaagctggcggccaagaacagc
gtgggctctgggcgcatcagtgagatcatcgaggccaagacccacgggcgtgagccttcc
ttcagcaaagaccagcacctcttcactcacatcaactccacgcatgctcggcttaacctg
cagggctggaacaacgggggctgcccaatcacggccatcgtgctggagtaccggcccaag
ggcacctgggcctggcagggcctgcgcgccaacagctccggggaggtgtttctgactgag
ctgcgagaggccacgtggtacgagctgcgcatgagggcttgcaacagcgctggctgcggc
aacgagactgcccagttcgccaccctggactacgacggcagcaccatcccacccatcaag
tctgcacaaggcgagggggatgacgtgaagaagctgttcaccatcggctgcccggtcatc
ctggccacactgggggtggcactgctcttcatcgtccgcaagaagaggaaagagaagcgg
ctgaagcggctccgagatgcaaagagtttggcagaaatgttgataagcaagaacaaccgg
agctttgacacccctgtgaaggggccaccccagggcccccggctacacattgacatcccc
agggtccagctgctcatcgaggacaaggagggcatcaagcagctgggagatgacaaggct
accatccctgtgacggatgctgagttcagccaagctgtcaacccgcagagtttctgcacc
ggtgtttccttgcaccacccagcccttatccagagcacaggacccctcatcgacatgtct
gacatccggccaggcaccaatccagtgtccaggaaaaatgtaaagtcagcccacagcacc
cggaaccggtactcaagccagtggactctgaccaagtgccaggcctccacacccgcccgc
accctcacctctgactggcgcactgtgggctcccaacatggtgtcactgtcaccgagagt
gacagctacagtgccagcctctcccaggacacagacaaaggacgaaacagcatggtgtcc
accgagagcgcctcttccacctacgaggagctggcccgggcctatgagcatgccaagctg
gaggagcaactgcagcacgccaagtttgagatcaccgaatgtttcatctccgacagctct
tctgaccaaatgaccacgggcaccaacgagaacgctgacagcatgacatccatgagcaca
ccctcagagcctggcatctgccgcttcaccgcctccccacccaagccccaggatgccgac
cggggcaaaaacgtggctgtgcccatccctcaccgggccaacaagagtgactactgtaac
ctgcccctctatgccaagtcggaagccttcttccgaaaggcagacgggcgcgagccctgt
cctgtggtcccaccccgcgaggcctccatcaggaacctggctcgaacctaccacccccag
gctcgccacctgaccctggaccctgccagcaagcccttgggcctcccgcacccgggggct
cccgctgccgcctccacagccaccttacctcagaggactctggccatgccagccccccca
gccggcacggcccccccagcgcccggcccancccctgccgagcccccggctgcgcccagt
gctgcccctccggcccccagcaccgagcctccacgggccgggggcccacacaccaaaatg
gggggctccagggactcgcttcttgagatgagcacgtcgggggtggggaggtctcagaag
cagggggccggggcttactccaaatcctacaccctggtgtag
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integrated database retrieval system
