Sus scrofa (pig): 100511162
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Entry
100511162 CDS
T01009
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100511162 (SORCS3)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Others
Others
100511162 (SORCS3)
Endosome - Lysosome transport
100511162 (SORCS3)
Endosome - Golgi transport
100511162 (SORCS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
100511162
NCBI-ProteinID:
XP_020928471
Ensembl:
ENSSSCG00000010617
UniProt:
A0A8D0TFP5
LinkDB
All DBs
Position
14:115587176..116202433
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AA seq
1255 aa
AA seq
DB search
MEAARTERPAGWPGAPLARTGLLLLSTWVLAGAEITWGATGGPGCLSAPASQSPALPPLL
RRAVASQWTEELVTVRRGAALGRRPGPEPLLQPGGGSGGKKQGEAGGLSLAGTRWGQGML
APGKPSGARRSRRAQPLSALEHGDTRTTVLADGSKGSRPLAKGLREEVKAPRAGGLAAEE
LRLPSTSFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSQKISILT
GEKYISTWDLKPEVTHSRCSVKFARSTDYGTTYEKLNDKVGLKTVLSYLYVNPTNKRKIM
LLSDPEMESSILISSDEGATYQKYRLTFYIQSLLFHPKQEDWVLAYSLDQKLYSSMDFGR
RWQLMHERITPNRFYWSVAGLDKEADLVHMEVRTADGYAHYLTCRIQECAETTRSGPFAR
SIDISSLVVQDEYIFIQVTTGGRASYYVSYRREAFAQIKLPKYSLPKDMHIISTDENQVF
AAVQEWNQNDTYNLYISDTRGIYFTLAMENIKSSRGLMGNIVIELYEVAGIKGIFLANKK
VDDQVKTYITYNKGRDWRLLQAPDVDLRGSPVHCLLPFCSLHLHLQISENPYSSGRISSK
ETAPGLVVATGNIGPELSYTDISVFISSDGGNTWRQIFDEEYNVWFLDWGGALVAMKHTP
LPVRHLWVSFDEGHSWDKYGFTSLPLFVDGALVEAGVETQIMTVFGHFSLRSEWQLVKVD
YKSIFSRRCNKEDFQTWHLLNQGEPCVMGERKIFKKRKPGAQCALSRDASGTVVSEPCVC
ADWDFECDYGYERHGESQCVPAFWYNPASPSKDCSLGQSYLNSTGYRRIVSNNCTDGLRE
KYTAKAQMCPGKAPHGLHVATTDGRLVAEQGHNATFIILMEEGDLQRTNIQLDFGDGIAV
SYANFSPIEDGIKHVYKSAGIFQVTAYAENNLGSDTAVLFLHVVCPVEHVHLRVPFVAIR
NKEVNISAVVWPSQLGTLTYFWWFGNSTKPLITLDSSISFTFLAEGTNTITVQVAAGNAL
IQDTKDIAVHEYFQSQLLSFSPNLDYHNPDIPEWRQDIGNVIKRALVKVTSVPEEQILVA
VFPGLPTSAELFILPPKNLTERRKGNEGDLEQIVETLFNALNQNLVQFELKPGVQVIVYV
TQLTLAPLVDSSAGHSSSAMLMLLSVVFVGLAVFLIYKFKRKIPWINIYAQVQHDKEQEM
IGSVSQSENAPKITLSDFTEPEELLDKELDSRVIGSIATIANSESTKEIPNCTSV
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgcgcacggagcgccccgcaggctggcccggggcgcccctcgcccggacc
gggctcctgctcctgtcgacgtgggtcttggctggtgccgagatcacttggggcgcgaca
ggcggtcctgggtgcctttcggctccggcttcacagtccccggcgctgcctcctctctta
cggcgggcagtggcaagccagtggacagaggagctggtgacggtgaggagaggcgctgca
ctggggcgccggccgggaccagagccactgctccagccaggcggtggcagcggcggaaag
aagcagggagaagccggggggctgtcattggcaggcacgcggtggggacaaggcatgttg
gctcctggcaagcctagcggcgcgaggaggagtcgccgggcgcagcccctcagtgccctg
gaacacggggatacccggaccactgtcttagctgatggttccaaaggaagccgccctctg
gccaagggtctccgggaggaagtgaaggcgccacgggctggggggttggcggctgaagag
ctcaggctaccgagcacctcctttgcgctgaccggggactcggcccacaaccaagctatg
gtgcactggtcgggacacaacagcagtgtcatacttatcctgacaaagctgtatgacttc
aacctggggagcgtgactgagagctcgctttggagaagtcagaagatatctattttgact
ggagaaaagtacatttccacatgggatctgaagccagaggtgacccacagcagatgctcg
gtgaaatttgcaagatcaacagattatggcaccacctatgagaagctgaatgacaaagta
ggtttgaagactgtcctcagctacctctatgtcaatcccaccaacaaaaggaagatcatg
cttctcagtgatcctgagatggaaagtagcatattgatcagctcagatgaaggggcgact
tatcagaaataccggctcactttctatatccagagtctgctctttcaccccaagcaagag
gactgggtgctggcctacagtctggatcaaaagctctacagctccatggactttgggaga
cggtggcaactcatgcatgaacgcatcacacccaacaggttttactggtcggtggctgga
ttggacaaggaagcggacctggtgcacatggaggtgcggacggcagatggatatgctcac
tacctcacctgcaggatccaggaatgtgctgagactactcggagtgggccttttgctcgc
tccattgacattagctccctggtcgtccaggatgaatatatcttcattcaggtgacaaca
ggtgggagagccagctactatgtgtcctaccgaagagaggcttttgctcagataaagctg
cccaagtactcgctgccaaaggacatgcacatcatcagtaccgatgagaaccaagtgttt
gcagccgtccaggaatggaaccagaatgacacatacaatctctacatctcagacacacgt
gggatctacttcaccctggccatggagaacattaagagcagccgaggactaatgggaaac
atcgttattgaattgtacgaggtagcaggtatcaaagggatattcctggcaaacaagaag
gtggatgaccaggtgaagacatacatcacgtacaacaagggcagggattggcgtctactg
caagctccagatgtggacctgagaggaagccctgtacactgtctgctgcccttctgctcc
ctacacctacacttgcaaatctctgaaaatccgtattcctcaggaagaatctccagcaag
gagacagctccagggctcgtggtggctacaggcaatattggcccagagctctcgtatact
gatatcagtgtgttcatctcttccgatgggggcaacacatggagacagatctttgatgaa
gagtacaatgtctggttcctagactggggtggcgccctcgtggccatgaaacacacacct
ctgccagtcaggcatttgtgggtgagtttcgatgagggccactcctgggacaagtatggt
ttcacctcacttcctctctttgttgacggggctctggtggaggcaggtgtggagacccag
atcatgacagtttttggtcacttcagcctccgctctgaatggcagttggtgaaggtggac
tacaaatcaatcttcagccggcgctgcaataaggaggacttccagacctggcacctgctc
aatcagggggagccttgcgtcatgggagaaaggaaaattttcaagaaacgcaagccaggt
gctcagtgtgccctgagcagagacgcctcagggacagtggtctcagaaccatgtgtctgt
gccgactgggactttgaatgtgactatggctacgagagacatggagaaagccagtgtgtt
ccagctttctggtacaatccagcctccccatcaaaagactgcagccttggtcaaagctac
cttaacagcactgggtaccggcggattgtgtccaacaactgcacagatggactgagggag
aagtacaccgccaaggcccagatgtgccctggaaaagcccctcacggcctccacgtggcg
acaaccgatggccgcctggtggcggagcagggacacaatgccaccttcatcatcctcatg
gaggagggtgatctccaaaggacaaacatccagcttgactttggggatgggattgccgtg
tcttatgctaacttcagtcccattgaggatggcatcaagcatgtgtacaagagtgcaggc
atcttccaggtgacggcctatgcagagaacaacctgggttcagacacagctgtcctcttc
ttgcacgtggtttgtcctgtggagcacgttcatctcagagttccatttgttgccataaga
aataaggaggtcaacatcagtgcagtggtgtggcccagccagctggggacccttacctat
ttctggtggttcggcaatagtacaaagcctctcatcaccttggacagcagcatttccttc
acattcctagcggagggaaccaataccatcaccgtccaggtggctgctgggaatgccctt
atccaggacacaaaagatatcgcagttcatgaatacttccagtcccagctcttatcattc
tctcctaatctggattaccataaccctgacattcctgagtggaggcaagatattggcaat
gtcatcaagcgggctctggtgaaagtaaccagtgtcccagaagaacagatcctagttgct
gtgttccctggcctcccaacttcagcagagctcttcatccttccccccaagaacttaaca
gagaggaggaaaggcaatgaaggggacctggaacaaattgtagagacactgtttaatgct
ctaaaccaaaacttggtccagtttgaactgaagccaggggttcaagtgattgtgtatgtc
acacagctgacattagctccattggtggactccagtgccggacacagcagctcagcgatg
cttatgctcttgtcagtggtgtttgtgggcctggctgtgtttttgatctacaagtttaaa
aggaaaatcccctggattaacatctatgctcaagtccaacacgacaaggagcaggagatg
attgggtcagtgagccaaagtgaaaatgcccccaaaatcacactcagtgacttcaccgag
cccgaggaactgctggacaaagagctggactcccgggtcataggaagcattgccaccatt
gcaaacagcgaaagcacaaaggagatccccaactgcactagtgtttaa
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