Sus scrofa (pig): 100511299
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Entry
100511299 CDS
T01009
Symbol
UBR1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100511299 (UBR1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100511299 (UBR1)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
100511299 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
ATPase_2
Motif
Other DBs
NCBI-GeneID:
100511299
NCBI-ProteinID:
XP_020952748
Ensembl:
ENSSSCG00000004717
ENSSSCG00000023179
UniProt:
A0A286ZPW1
A0A8D1QW40
LinkDB
All DBs
Position
1:128319311..128474330
Genome browser
AA seq
1753 aa
AA seq
DB search
MAEEEAGGAERMEVSTELPQTPQRLASWWDQQVDFYTSFLNHLAQLVPEIYFAEMDPDLE
KQEESIQMSIFTPLEWYLFGEDPDICLEKLKHSGAFQLCGKVFKSGETTYSCRDCAIDPT
CVLCMDCFQNSVHKNHRYKMHTSTGGGFCDCGDTEAWKTGPFCLSHEPGRAGTTKESLRC
PLNEEVIAQARRIFPSVIKYIVEMTIWEEEKELPPELQIREKNDRYYCVLFNDEHHSYDH
VIYSLQRALDCELAEAQLHTTAIDKEGRRAVKTGAFSACQEAKEDIKSHSENVSQHPLHV
EVLHSEVMAHQKFALRLGSWMNKIMSYSSDFRQIFCQACLREEPGSENPCLISRLMLWDA
KLYKGARKILHELIFSSFFMEMEYKKFFAMEFVKYYKQLQKDYISDDHDRSISVTALSVQ
MFTVPTLARHLIEEQNVISVITETLLEVLPEYLDRNNKFNFQGYSQDKLGRVYAVICDLK
YILISKPTVWTERLRMQFLEGFRSFLKILTCMQGMEEIRRQVGQHIEVDPDWEAAIAIQM
QLKNILLMFQEWCACDEELLLVAYKECHKAVMRCSTSFVSSSKTVLQLCGHTLETKSYKV
SEDLVSIHLPLSRTLAGLHVRLSRLGAISRLHEFVPFEDFQVEVLVEYPLRCLVLVAQVV
AEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNRFLLLVLQRYELADA
FNKTIATKDQDLIKQYNTLIEEMLQVLIYIVGERYVPGVGNVTKEEVTMREIIHLLCIEP
MPHSAIAKNLPENENNETGLENVINKVATFKKPGVSGHGVYELKDESLRDFNMYFYHYSK
TQHSKAEHMQKKRRKQENKDEALPPPPPPEFCPAFSKVVNLLNCDVMMYILRTIFERAVD
PDSNLWTEGMLQMAFHILALGLLEEKQQLQKSPEEEVTFDFYHKASRLGSSAMNAQNIQM
LLEKLKGIPQLEGQKDMITWILQMFDTVKRLREKSCLIVATTSGSESIKNDEIIHDKEKA
ERKRKAEAARLHRQKIMAQMSALQKNFIETHKLMYDSTSEMSGKEDSIMEEESTPGVSDY
SRIALGPKRGPSVTEKEVLTCILCQEEQEVKIENNAMVLSACVQKSTTLTQHRGKPIELS
GETLDPLFMDSDLAHGTYTGSCGHVMHAVCWQKYFEAVQLSSQQRIHVDLFDLESGEYLC
PLCKSLCNTVIPIIPLQPQRINSENTEALAQLLTLARWIQTVLARIRGYNVKHAKGEHAT
VPFLFDQGMGDSTFEFHSILSFGVQSSIKYSNSIKEMVILFATTIYRIGLKMPPDETDPR
IPMMTWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQFAIAQRITCSQVLIQK
HLIRLLSVVLPILKSDDTPCLLSIDLFHVLVGAVLAFPSLYWDDAVDLQPSSVSSSYNHL
YLFHLITMAHMFQILLTIDTGLPLAQTQEESEEAHSASSFLAEVSQYTNGYVGCGIPGWY
LWVSLKNGIIPYLRCAALFFHYLLGITPPEDLFTNSAESEYSALCSYLSLPTNLFLLFQK
YWDTIRPLLQRWCADPALLNCLKQKSTIVRYPRKRNSLIELPDDYSCLLNQASHFRCPRS
SDDERKHPVLCLFCGAILCSQNICCQEIVNGEEVGACIFHALHCGAGVCIFLKIRECRVV
LVEGKARGCAYPAPYLDEYGETDPGLKRGNPLHLSRERYRKLHLVWQQHCIIEEIARSQE
TNQMLFGFNWQLL
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggaggctgggggcgcagagaggatggaagtcagcacggagttgccccag
acccctcaacggctggcgtcttggtgggatcagcaagttgacttctatacttcctttttg
aaccatttggcacagttggtgccagaaatttattttgctgaaatggacccagacttggaa
aaacaggaggagagtatacaaatgtcaatattcaccccactggaatggtacttatttgga
gaagatccagatatttgtttagagaaattgaaacacagtggagcatttcagctctgtggg
aaggttttcaaaagtggagagacaacatattcttgtagggactgtgcaattgatccaaca
tgtgtactctgtatggactgcttccagaatagtgttcataaaaatcatcgttacaagatg
catacctctactggaggaggattttgtgactgtggagacactgaagcatggaaaactggc
cctttttgtttaagtcatgaacctggcagagcaggtactacaaaagagagcttacgttgt
ccattgaatgaagaggtgattgcccaggccaggagaatattcccttctgtgataaaatat
attgtagaaatgactatatgggaagaggaaaaagaactgcctcctgaactccagataaga
gagaaaaatgatagatactactgtgtccttttcaatgatgaacaccattcatatgaccat
gtcatatacagtctacagagagctcttgactgtgagcttgcagaagcccagttgcatacc
actgccatagacaaagagggtcgtcgagctgttaaaacaggtgctttttctgcttgccag
gaagcaaaggaagatattaagagtcattcagaaaatgtctctcaacatccactgcatgta
gaagtattacactctgaggttatggctcatcagaaatttgctttgcgtctgggatcctgg
atgaataaaattatgagttattcaagtgactttagacagatcttttgtcaagcatgcctt
agagaagaacctggctctgagaatccctgtctcataagcaggttaatgctttgggatgca
aagctttataaaggtgcccgtaagatccttcacgaattgatcttcagcagtttttttatg
gagatggaatacaaaaaattctttgctatggaatttgtgaagtattataagcagctccag
aaggactatatcagtgacgatcatgacagaagtatctctgtaactgcactctcagttcag
atgtttactgttcctactttggctcgacatcttattgaggagcagaatgttatctctgtc
attactgaaactctactggaagttttaccagagtacttggataggaacaataaattcaac
tttcagggttacagccaggacaaattgggaagagtatatgcagtaatatgtgatctaaag
tatatcctgatcagcaagcccacagtgtggacagaaagattaagaatgcagttccttgaa
ggttttcgatcctttttgaagattcttacctgtatgcagggaatggaagaaattagaaga
caggttgggcaacacatagaagtagatcctgactgggaggctgccattgctatacagatg
caattgaagaatattttactcatgttccaagagtggtgtgcttgtgatgaagaactctta
ctagtggcttataaagaatgtcacaaagctgtgatgaggtgcagtacaagtttcgtatct
agtagcaaaacagtattacaattgtgtggtcatactttggaaactaagtcctacaaagta
tccgaagatcttgtaagcatacatctgccactctctaggactcttgctggtcttcatgtg
cgtttaagcaggttgggtgctatttcaagactgcatgaatttgtgccttttgaggatttt
caagtagaggtactcgtggaatatcctttgcgttgtctggtgttggttgcccaggttgtt
gctgaaatgtggcgaagaaatggtctctctctcattagccaggtattttattaccaagat
gttaagtgcagagaagaaatgtatgataaagatatcatcatgcttcagattggtgcatct
ttaatggaccccaacaggtttttgttactggtacttcagaggtatgaacttgctgatgct
tttaacaagaccatagccacaaaagatcaggatttgattaaacaatataataccttaata
gaagaaatgcttcaagtcctcatctatattgtgggagagcgttatgtacctggagtggga
aatgtgactaaagaagaagtcacaatgagagaaattattcacttgctttgtattgaaccc
atgccgcatagtgccattgccaaaaatttacctgagaatgaaaataatgaaactggctta
gagaatgtcataaacaaagtggccacatttaagaaaccaggggtatcaggccatggagtt
tatgaactgaaagatgaatcattgagagacttcaatatgtacttttatcattactcaaaa
acacagcatagcaaggctgaacatatgcagaagaaaaggagaaaacaggaaaacaaagat
gaagcattaccaccaccaccacctcctgaattctgccctgctttcagcaaagtggttaac
cttctcaattgtgatgttatgatgtacattctcaggaccatatttgagcgggctgtagac
ccagattctaacttatggactgaagggatgcttcagatggcatttcatattctggcattg
ggcttactagaagaaaagcaacagcttcagaaatctcctgaagaagaagtgacatttgac
ttttaccataaggcttcaagattgggaagttcagccatgaatgctcagaatatacaaatg
cttttggaaaaactcaagggaattccccagttagaaggccagaaggatatgattacatgg
atactccagatgtttgataccgtgaagcggttgagagaaaaatcttgtttaattgtagca
actacatcaggatcagaatctattaagaatgatgagattattcatgataaagaaaaggca
gaaagaaaaagaaaagctgaagctgctaggctacatcgtcagaagatcatggctcagatg
tctgccttacaaaaaaacttcattgaaactcacaaacttatgtatgacagtacatcagaa
atgtctgggaaagaagactccattatggaggaagaaagcaccccaggagtcagtgactac
tctagaattgctttgggtcctaaacgggggccgtctgttactgaaaaggaggtgctgaca
tgcatcctctgccaagaagaacaagaggtgaaaatagaaaataatgccatggtattatcg
gcctgtgtccagaaatccaccaccttaacccagcacaggggaaaacccatagaactctca
ggggaaaccctggacccacttttcatggattcagacttggcccatggaacttacacagga
agctgtggtcatgtaatgcatgcagtgtgctggcagaagtactttgaagctgtacagctg
agctctcagcagcgcattcatgttgaccttttcgacttagagagtggagaatatctttgc
cctctttgcaagtctctgtgcaatactgtaatccccattattcctttacaacctcaaagg
ataaacagtgagaatacagaagcgcttgctcaacttttgacgctggcacgatggatacag
actgttctagccagaataagaggttataatgtgaaacatgctaaaggagaacatgcaaca
gttccattcttatttgatcaaggaatgggtgattccacttttgagttccattctatcctg
agttttggagttcagtcttcgataaaatattctaatagcatcaaggaaatggtcattctc
ttcgccacaacaatttatagaattggattgaaaatgcctcctgatgaaacagatcctcga
atccccatgatgacctggagcacatgtgctttcactatccaggcaattgaaaaccttttg
ggagatgaaggaaaacctttgtttggagcacttcaaaatagacagcataatggtttgaaa
gcattaatgcagttcgccattgcacaaaggattacctgttctcaagtgctgatacagaaa
catctgattcgtcttctttcagttgttcttcccatcctgaaatcagatgatacaccttgc
cttctatccatagatctgtttcatgttttggtgggtgctgtgttagccttcccatccttg
tattgggatgatgctgttgatctgcagccttcctcagttagctcttcctataaccacctt
tatctcttccatttgatcaccatggcacacatgtttcagatacttcttaccatagacaca
ggccttccccttgcacagactcaagaagagagtgaagaggctcattctgcatcttctttc
ttggcagaagtttctcaatatacaaatggctacgttgggtgtggtattcctggctggtat
ttatgggtctcattgaagaatggcatcatcccttaccttcgctgtgctgcattgtttttc
cattatttacttggaataactccacctgaagatctgtttaccaattctgcagagagcgag
tacagtgcactctgtagctatttatctttacccacaaatttgtttctgcttttccagaaa
tattgggatactataaggcccctcctccagaggtggtgtgcagaccctgccttactaaac
tgtttgaagcaaaaaagcaccattgtcaggtaccctagaaaaagaaatagcttgatagaa
cttcctgatgactatagctgcctcctaaatcaagcttctcatttcaggtgcccacggtct
tcagatgatgaacgaaagcaccctgtcctctgtcttttctgtggagccatactgtgttct
cagaacatttgttgccaagaaatcgtgaatggggaagaggtgggggcttgcatttttcat
gcacttcactgtggagctggagtctgcattttcctgaaaatcagagagtgtagagtggtc
ctggttgaaggtaaggcccgaggctgtgcctacccagccccctatttggatgaatatgga
gaaacagaccctggcctgaagaggggcaaccctctccatttatctcgagagcggtatcgg
aagcttcatttggtgtggcagcaacactgcattatagaagagattgctaggagccaggaa
actaatcaaatgttgtttggattcaactggcagttactgtga
DBGET
integrated database retrieval system
