Sus scrofa (pig): 100511336
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Entry
100511336 CDS
T01009
Symbol
PROM1
Name
(RefSeq) prominin-1 isoform X1
KO
K06532
prominin 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100511336 (PROM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssc04147
]
100511336 (PROM1)
04090 CD molecules [BR:
ssc04090
]
100511336 (PROM1)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100511336 (PROM1)
CD molecules [BR:
ssc04090
]
Proteins
100511336 (PROM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Zn_ribbon_Top1
PMSR
MAP65_ASE1
Tweety
Motif
Other DBs
NCBI-GeneID:
100511336
NCBI-ProteinID:
XP_013833988
Ensembl:
ENSSSCG00000008745
LinkDB
All DBs
Position
8:complement(11215659..11331442)
Genome browser
AA seq
848 aa
AA seq
DB search
MAPVLGFLLLLGLCGDTVSEGPLTSTDRSVGLKFEFPPVKYETEESYEAGPINILFQIVH
VFLHLVQPNPFPEDILRKVIQKKFDLSKDYEKIIYYEIGIIICAVLGLLFIILMPLVGLI
FCSCRCCNKCGGEMHQRQKKNGNFLRKYFAVSLLVICLLISIGIIYGFVANQHMRTHIGK
TWKLSESNFKDLRTFLNTTPEQIDYIAEQYTTTKERVFSDLDNIKVLLGSRIYQQLKPKL
IPMLDDAMAIGEELKTLRESLVQANLNLMDTKQSLTQLGHNLSDVRRGLEQTLSDSTCHA
DPVQTTCNDIRSSLGLVNVSINPDQLPSLEEHINNLTAVLRTNLTALAHQGYNYLYTIPE
RVQNETVNIIADVKRALNSIGSNIETASQGFPIRDRLSYFSSYLKKAEDYIHRYLRVLEE
YDLYRWLGCLVACCLLTLIATFYSLGLLCGTYGYDQSASPTGRGFISNTGGVFLMVGVGF
SFFFCWLLMTLVVLSFVLGANMEKLVCEPYQSKKLFQVLDTPYLLKEDWKYYLSGMIFDN
SDIQITFEQVYSDCKENKSIYATLKLEHAYNITDQVNITKYTGDIYSSFENMNISIKNVM
KVDEEGRRNLRAFHSLELDKVDYAAIMAETAKPPTQVNLLTFADNLDAKASNLTPGNLKN
SLRSHAETLRRIHDVQVVLLQRLLSAVYQCMQELQQKTTGLGVRMQNILFFVNDTQNFVT
NLITAVVHEERRKYVTTILSYFEQYLQWVKHSVTEQIAACKPVATALDSVVNIFLCGYVI
DPLNLFWFGIGKATVLLLPALIFAVKLAKYYRRMDSEDVYEDGKVDNMENGSIGLYRQHG
ATQIKQSF
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgtcctcggcttcctgctgctgctggggctgtgtggggacaccgtttcagag
gggccgctgacatccacagacaggtctgttgggttgaaatttgaatttccgccggtgaag
tacgagaccgaagagtcttatgaagctggacccatcaacatcctcttccagatcgtgcac
gtcttcctccacctggtgcagcccaaccctttccctgaagatattttaagaaaagttata
cagaagaagtttgacctctccaaggattatgagaagattatctactatgaaatcgggatt
attatctgtgctgtcctggggttgctgtttattatcctaatgcctctggtggggcttatc
ttttgttcctgccgttgctgtaacaagtgcggtggagaaatgcaccagcgacagaagaaa
aacggaaacttcctcagaaagtactttgccgtttccctcttggtgatatgtctacttata
agcatcggtatcatctatggttttgtggcaaatcaacacatgaggactcacatcgggaag
acttggaaattgtcagaaagtaatttcaaggatttgaggacgttcctgaatacaactccg
gagcaaatcgactatatagcagagcagtataccaccactaaggaacgggtgttctcggac
ctggacaatattaaagtgttgctgggaagcagaatttatcaacagctcaaacctaagttg
atccctatgctggatgacgccatggccattggtgaagaattgaaaacgctcagagaatcc
ctggtccaagcgaaccttaacttaatggacacgaaacagtcactgacacaacttggccac
aacctgagtgacgtgagaaggggcttggagcaaaccctctctgactccacgtgccatgcg
gatccagtgcaaaccacctgtaatgacatcaggagcagtctaggccttgtgaacgtcagc
atcaatcctgatcagctcccatctttggaagagcatattaataatcttactgctgttctt
cgaacaaatttgaccgccctggcccaccagggctataattatctttataccatacctgag
agagtgcaaaatgaaactgtgaacatcatagcagatgtcaaaagggccttgaattccatt
ggttcaaatatcgaaactgcgagccaggggtttcctattcgggacaggctgtcgtatttc
agtagctaccttaagaaagcggaagattacatccaccgctatttacgtgtgttggaggaa
tatgatctatacaggtggctgggctgcttggttgcctgctgtttgctgaccctcatagcg
actttttactccctgggcttgctgtgtggcacatacggctacgaccagagcgccagccca
accggccgaggcttcatctccaacaccggaggcgtctttctcatggtcggagttggattt
agtttcttcttttgctggctattgatgaccctcgtggttctttcttttgtccttggtgca
aacatggaaaaactggtctgtgaaccttatcaaagcaaaaagttattccaggttttggac
acaccgtatttactgaaggaggattggaaatactatctctccggcatgatattcgacaat
tcggatattcagatcacttttgaacaagtttacagtgattgcaaagaaaataaaagcatt
tatgccacacttaagctagagcacgcctacaatatcactgaccaggtcaacattacaaag
tataccggagacatatacagcagttttgaaaatatgaatataagtattaagaatgtaatg
aaggtggatgaggaaggaagaagaaacctgagggctttccactccttagaattagacaaa
gtagactatgctgccatcatggctgagacggctaaacctcccacacaagtgaatcttctg
acatttgcagataatctagatgcaaaggccagtaatttgacccctggaaatttgaaaaac
tccctgagaagtcatgcagaaactttaagaaggattcatgacgtccaagtcgttcttttg
caaagattattgagcgctgtgtaccaatgcatgcaggaacttcaacagaaaaccactgga
ttgggggtgagaatgcaaaatatccttttctttgtgaatgatactcagaactttgtcaca
aacttgatcaccgcagtcgttcacgaagaaaggaggaagtatgtgactacgatactgagc
tacttcgaacagtatctgcagtgggtcaagcactcggtcaccgagcaaatcgcagcctgc
aaaccggtggccaccgctttagattctgtggttaacatctttctgtgcggctacgtcatt
gaccccctgaatttgttttggttcggcataggaaaagctaccgtattgttacttccggct
ctaattttcgctgtaaagctggccaagtactaccgtcgaatggattcggaagacgtgtat
gaggacggaaaggtagacaatatggaaaatggtagtattggtctctataggcaacatgga
gccactcagattaaacaaagtttttaa
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