Sus scrofa (pig): 100511415
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Entry
100511415 CDS
T01009
Symbol
CIR1
Name
(RefSeq) corepressor interacting with RBPJ 1
KO
K06066
CBF1 interacting corepressor
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04330
Notch signaling pathway
ssc05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100511415 (CIR1)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100511415 (CIR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cir_N
DNA_pol_phi
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
100511415
NCBI-ProteinID:
NP_001230760
Ensembl:
ENSSSCG00000027516
LinkDB
All DBs
Position
15:complement(80338317..80375708)
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AA seq
436 aa
AA seq
DB search
MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMG
DERVKNGLNFMYEAPPGAKKENKEKEETEGETEYKFEWQKGAPREKYAKDDMNIRDQPFG
IQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFA
LKRNVLGRNLTANDPSQEYVASEGEEDPEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKKK
DRKKKKLQRSRSKHRKHKNKSSSSSSSSSSSSSSETSESSSESDNKEKNIQKKKRKKNKH
SGHNSSDSDEEIDKSKKRKLDEERSGSHSNKEKPRSFKRESSGENGKWSHSDSDRKPRSY
NQSPEKRGSGRDERRNRSQSRDERNRRSRSRSHGSYKPKEIRKRSRRSPSEERKRGNDTR
SHGTDIYRGGKTPREH
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggggaaatccttcgccaatttcatgtgcaagaaggactttcatcctgcctccaaatcc
aacatcaaaaaagtatggatggcagaacagaaaatatcatatgataagaagaaacaagaa
gaattaatgcagcagtatcttaaagagcaagaatcatatgataacagattgcttatggga
gatgaacgtgtaaagaatggccttaatttcatgtatgaggctccaccaggggctaagaaa
gaaaacaaagagaaagaagaaacagaaggagagaccgaatacaaatttgaatggcagaaa
ggagccccacgagaaaaatatgccaaagatgacatgaacatcagagatcagccctttggt
attcaggttcgaaatgtgaggtgcattaaatgtcacaaatggggtcatgtcaacacagat
cgagaatgtcctttgtttggtctttctggaattaatgcaagttcagttcccactgatggc
tcagggccatcgatgcacccctcggagctaatagcggagatgagaaacagtgggtttgca
ctgaaacgaaatgtactggggagaaacttgaccgcaaatgatccatcacaggaatatgtt
gcaagcgagggtgaagaagatccagaagttgaatttttaaagtcactgacaacaaaacaa
aaacagaaacttctcaggaagctggatcgacttgagaagaaaaaaaagaaaaagaaaaaa
gatagaaaaaagaaaaagcttcagaggagcagaagtaaacacagaaaacataaaaacaaa
tcctcttcctcttcctcctcctcctcctcttcctcctctagtgagacttcagaaagcagc
agtgagagtgacaacaaagaaaaaaacatacaaaagaagaaaagaaagaaaaacaagcat
tcagggcataacagcagtgattctgacgaagagatcgacaagtctaagaagagaaaactt
gatgaagagcgttctggcagtcacagtaacaaggaaaagcccagatctttcaaacgagag
agttctggggagaatggcaaatggagccattctgattctgaccgaaagcccagaagctat
aaccagagtccagagaagagaggatcgggaagagacgagaggagaaacaggagccagagc
agggatgagaggaataggagaagccgaagcagaagtcacggtagctacaagccaaaagaa
ataagaaaacggtcacggcgaagtcccagtgaagagcggaagagaggaaacgacaccaga
agccatggcacagatatatacagaggggggaaaacgcccagagagcactag
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