Sus scrofa (pig): 100511439
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Entry
100511439 CDS
T01009
Symbol
RFX1
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X2
KO
K09173
regulatory factor X 1/2/3
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100511439 (RFX1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Other basic domains
RF-X
100511439 (RFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
100511439
NCBI-ProteinID:
XP_005661296
Ensembl:
ENSSSCG00000013764
LinkDB
All DBs
Position
2:65173559..65205551
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AA seq
934 aa
AA seq
DB search
MATQAYVTELQAAPQPSQPPQAPPQPQPQPPPPPSAAPQPPQPPATAATPQPQYVTELQS
PQPQAQPPGSQKQYVTELSAAPAPSQPAGAPAPSPASQQYIVVTVSEGAMRASETVSEAS
PGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNIPVPQQALPTQRLVV
QSTAPGGKGGQVSLTVHSTQQVHSPPERSVVQATPQVPKAGPVQQLTVQGLQPVHVAQEV
QQLQQVPVPHVYSSQVQYVEGGDASYTASAIRSSTYPYPETPLYTQTAGTSYYEAAGTAA
QVSTPATSQAVASSGSVPMYVSGSQVVASSTSSGSAASNSGSGGSGGGGGGGGGSGGGSS
SGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLL
HCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQ
HMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGPQQATGLSDISAQVQQYQQFLDASRSLPD
FSELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQ
PSEAPPLAVHDEAEKRLPKASLVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPS
ALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVL
QNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWL
DGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEY
MYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAA
GSESPALGPEALEPPAKLARTEARGLFVQALPSS
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacaggcgtacgttactgagctacaggcagccccgcaaccatcccagccacca
caggcacctccacagccccagccccagccaccacctccgccctcagcggcaccccagcca
ccccagccccctgccactgccgccaccccccagccccagtatgtcaccgagctgcagagc
ccccagccccaggcacagccaccaggcagccagaagcagtatgtgacagagctctcagct
gcccccgcaccctcgcagccggctggcgcacctgccccatccccggcgtcccagcaatac
atcgtggtcaccgtctccgaaggtgccatgcgggccagtgagactgtgtcagaggccagc
ccaggctccacggccagccagactggagtccccactcaggtggttcagcaggtgcagggc
acccagcagcggctgctggtccagacgagcgtgcaggccaagccaggccacgtgtcaccc
ctccagctcaccaacatcccggtgccccagcaggctctccctacgcagcgtctggtggtg
cagagcacagccccgggcggcaagggtggtcaggtctccctgacggtgcatagcacccag
caggtgcattcaccccctgagaggtccgtggtccaggccactccacaggtgcccaaagct
ggccccgtgcagcagctcacagtgcaagggctccagccagtccatgtggctcaagaggtg
cagcagctccagcaggtgccggtcccacacgtgtactccagccaagtgcagtatgtggag
ggcggcgatgccagctacacagccagtgccatccgctccagcacctacccctaccctgag
acacctctgtacacacagacggcaggcaccagctactatgaggctgcgggcacagctgcc
caggtcagcacacctgccacctcccaggcagtggccagcagtggctctgtgcccatgtac
gtgtctggcagccaggttgttgccagctccaccagcagtgggagtgcagccagcaacagc
ggcagcggcggcagtggaggcgggggtggtggtggtggcggcagtggtggcggcagcagc
agtggcagcggagctggtacctatgtgatccaaggcggctacatgctgggcagtgccagc
cagtcctactcccacaccacccgtgcctcaccagccactgtccagtggcttctggacaac
tatgagacagccgagggcgtgagcctgcctcggagtaccctctactgccactacctgctg
cactgccaggagcagaagctggagcctgtcaatgccgcctcctttggcaagctcatccgc
tctgtcttcatgggcttgcgcacccgacgtctcggcaccaggggcaactccaagtaccac
tactatggcctccgcatcaaggccagctcgcccctgctgcggctgatggaggaccagcag
cacatggccatgcggggccaacccttctcacagaagcagaggctcaaacccattcagaag
atggagggcatgaccaatggtgtggccgtggggccacagcaggccactgggctgtcggac
atcagtgcccaggtccagcagtaccagcagtttctggatgcctcaaggagcctccctgac
ttctcagagctcgacctccagggcaaagtgctgcctgagggcgtcgggcctggggatatc
aaggccttccaggtcctgtaccgggaacactgtgaggccatcgttgatgtcatggtgaac
ctgcagttcaccctggtagaaacgctgtggaaaaccttctggaggtacaacctcagccag
cccagtgaggcgccaccgctggccgtgcatgatgaggccgagaagcggctgcccaaggcc
agcctggtgctcctctccaagtttgagcccgtgctccagtggaccaagcactgtgacaac
gtgctgtaccagggcctggtggagatcctcatccccgacgtgctgcggcccatccccagt
gccttgacccaagcgatccggaactttgccaagagcctggagagctggctcacccacgcc
atggtgaacatacccgaagagatgctgcgggtgaaggtggcagcggctggcgccttcgcg
cagacactgcggcgctacacatcgctcaaccacttggcgcaggcggcgcgcgctgtgctg
cagaacaccgcgcagatcaaccagatgctgagcgatctcaaccgcgtggacttcgccaac
gtgcaggagcaggcctcgtgggtgtgccgctgcgaggaccgcgtagtgcagcggctggaa
caggacttcaaagtgacgcttcagcagcagaactcactggaacaatgggcggcctggctg
gacggcgtggtgagccaggtgctcaagccctaccagggcagcgccggcttccccaaggcg
gctaagctctttctcctcaagtggtccttctacagctccatggtgatccgggacctgacc
ctgcgcagcgccgccagctttggctcctttcacctcatccggctgctctacgatgagtac
atgtactacctgatcgagcatcgcgtggcccaggccaagggcgagacacccatcgcagtc
atgggcgagttcgccaacctggccacctctctgaaccccctggacccagacaaagacgag
gaggaggaagaagaggaggagagcgaggatgagctgccgcaggacatctctctagcagcc
ggcagcgagtcgcccgcgctgggccctgaggctctggagccaccggccaagctggcgcgg
acagaggcgcgcggcctcttcgtgcaggcgctgccctccagctaa
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