Sus scrofa (pig): 100511564
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Entry
100511564 CDS
T01009
Symbol
KRT5
Name
(RefSeq) keratin, type II cytoskeletal 5
KO
K07605
type II keratin, basic
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04382
Cornified envelope formation
ssc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
100511564 (KRT5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100511564 (KRT5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100511564 (KRT5)
04147 Exosome [BR:
ssc04147
]
100511564 (KRT5)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
100511564 (KRT5)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100511564 (KRT5)
Exosomal proteins of other body fluids (saliva and urine)
100511564 (KRT5)
Exosomal proteins of colorectal cancer cells
100511564 (KRT5)
Exosomal proteins of bladder cancer cells
100511564 (KRT5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Keratin_2_head
TPR_MLP1_2
FKBP15
CCDC39
CENP-F_leu_zip
DUF8776
KIF21A_4th
Sec10_N
ATG16
DUF7217
DUF745
DUF2740
Plectin_PPL
Baculo_PEP_C
APG6_N
Taxilin
SlyX
Alanine_zipper
CLIP1
ATG17_like
Bap31_Bap29_C
CCDC170_1st
CCDC89
CATRA-C
Mce4_CUP1
CCDC18_2nd
ODF2_C
Motif
Other DBs
NCBI-GeneID:
100511564
NCBI-ProteinID:
XP_003126221
Ensembl:
ENSSSCG00000000248
UniProt:
F1SGG6
LinkDB
All DBs
Position
5:complement(17862047..17868397)
Genome browser
AA seq
602 aa
AA seq
DB search
MSRQSSVSLRTGGSRSFSAASAITPSVSRTSFTTVSRSGGGGGGFGRVSLGGACGVGGYG
SRSLYNLGGSKRISISASGGGFRNRFGAGAGGGYGFGGGASSGFGFGGGAGGGFGLGGGA
GFGGGAGFGGGFGGPGFPVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTL
NNKFASFIDKVRFLEQQNKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILG
ERGRLDSELRNMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDA
LMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRT
EAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIA
DAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLE
GEECRLSGEGVGPVNISVVTNTLSSGYGGGSGFGGGLGGGLGGGLGGGLGGGLGGGIGGG
GGSSYYSSSSSGGVGLGGGLSVGGAGFSSSSGRSLGFGSGGGSSSSVKFVSTTSSSRKSF
KS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccaatcgagtgtgtccttacgcaccgggggcagccgtagcttcagcgccgcc
tctgccatcaccccgtctgtctctcgcaccagtttcaccactgtgtctcggtctgggggt
ggcggtggcggctttggcagggtcagccttgggggtgcttgtggagttggaggctatggc
agccggagcctctacaacctggggggttccaagaggatctccatcagcgctagcggtggt
ggcttcaggaaccgatttggtgccggtgctggaggcggctatggttttggaggtggagcc
agcagcggatttggttttggcggtggagcaggtggtggctttgggctcggtggcggtgct
ggctttggaggcggcgctggctttggaggtggcttcggtggccctggcttccccgtctgc
ccccctggaggcattcaagaggtcaccgtcaaccagagtctcctgactccccttaacctg
caaatcgaccccaccatccagcgggtgaggaccgaggagcgggagcagatcaagaccctc
aacaacaagttcgcctccttcatcgacaaggtgcggttcctggagcagcagaacaaggtc
ctggacaccaagtggaccctgctgcaggagcagggcaccaagactgtcaggcagaacctg
gagcctttgttcgagcagtacatcaacaacctcaggagacagctggacagcatcctggga
gagagaggccgcctggactcagagctgaggaacatgcaggacctggtggaggacttcaag
aacaagtatgaagatgaaatcaacaagcgtaccacagccgagaatgaatttgtgatgctg
aagaaggatgtggacgccgcctacatgaacaaggtggagctggaagccaaggtcgatgca
ctgatggatgagatcaacttcacgaagatgttctttgaggcggagctgtcccagatgcag
acacatgtctcagacacatctgtggtcctctctatggacaacaaccgcaacctggacctg
gacagcatcatcgccgaggtcaaggcccagtacgaggacatcgccaaccgcagccgcacg
gaagccgagtcctggtaccagaccaagtacgaagagctgcagcagacagctggccggcat
ggtgatgatctccgcaacaccaagcatgagatctctgaaatgaacaggatgatccagagg
ctgagagctgagatcgacaacgtcaagaagcagtgcgccaacctgcagaatgccattgct
gatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctggccgagctg
gaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccaggag
ctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctggag
ggcgaggagtgcagattgagtggagaaggtgttggaccagtcaatatctcggtcgtcaca
aacaccctctcctctggctatggcggtggcagtggctttggtggcggcctcggcggtggc
ctcggtggtggcctcgggggcggcctcggtggaggtctgggcggtggaattggtggaggt
ggtggcagcagctactactccagcagcagcagcgggggcgtaggccttggcggtgggctc
agcgtggggggcgctggcttcagttcaagcagtggccgaagcctgggctttggcagtggc
ggaggcagcagctccagtgtcaaatttgtctccaccacctcctcctcccggaagagcttc
aagagctaa
DBGET
integrated database retrieval system
