Sus scrofa (pig): 100511641
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Entry
100511641 CDS
T01009
Symbol
GRIK3
Name
(RefSeq) glutamate receptor ionotropic, kainate 3 isoform X1
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04080
Neuroactive ligand-receptor interaction
ssc04082
Neuroactive ligand signaling
ssc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100511641 (GRIK3)
04082 Neuroactive ligand signaling
100511641 (GRIK3)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100511641 (GRIK3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100511641 (GRIK3)
Ion channels [BR:
ssc04040
]
Ligand-gated channels
Glutamate (ionotropic)
100511641 (GRIK3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
100511641
NCBI-ProteinID:
XP_020951620
Ensembl:
ENSSSCG00000003640
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All DBs
Position
6:complement(92880297..93128048)
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AA seq
919 aa
AA seq
DB search
MTAPWRRLRSLVWEYWAGLLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAF
RFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNA
VQSICNALEVPHIQLRWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYD
DSTGLIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQ
ILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWS
MERLQAAPRAESGLLDGVMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGG
RFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPAEGLNITEVA
KGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFS
YEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGV
SILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPG
SEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAF
LTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVK
NNEEGIQRTLTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKIT
IAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAV
GEFVYKLRKTAEREQRSFCSTVADEIRFSLTCQRRVKHKPQPPMMVKTDAVINMHTFNDR
RLPGKDSMTCSTSLAPVFP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctccctggcggcgcctccggagtctggtttgggaatactgggccgggctcctc
gtgtgcgccttctggattccggactcgcgcgggatgccccacgtcatccggatcggaggc
atctttgagtatgcggacggccccaacgcccaggtcatgaatgccgaggagcacgccttt
cgattttctgccaacatcatcaacagaaacaggactctgctgcccaacacaaccttgacc
tacgacatccagaggattcacttccacgacagcttcgaggccaccaagaaggcctgtgac
cagctggcactgggggtggtggcgatcttcgggccatcccagggctcctgcaccaatgcc
gtccagtccatctgcaatgcgctggaggtgccccacatccagctgcgctggaagcaccac
ccgctggacaacaaagacaccttctacgtgaacctgtacccggactacgcctctctcagc
cacgccatcctcgacctggtccagtatctcaagtggcggtcggccactgtggtctatgac
gacagcacagggctcatccgactgcaggagctcatcatggccccgtcaaggtacaacatc
cgcctgaagatccgccagctccccctggactctgatgactcacgcccgctgctcaaagag
atgaaacgaggccgggaattccgcattatcttcgactgcagccacaccatggccgcccag
atcctgaagcaggccatggccatgggcatgatgaccgagtactaccacttcatcttcacc
actctggatctttatgcgttagacctggagccctaccgctactcgggggtgaacctgacg
ggattccggatcctcaacgtggacaacccgcacgtctcggccatcgtggagaagtggtcc
atggagcggctgcaggcggctccccgggcagagtccggcctgttggatggagtgatgatg
actgacgcggccttactgtacgacgcggtccacatcgtgtctgtgtgctaccagcgggct
ccccagatgaccgtgaactccctgcagtgccatcggcacaaggcctggcgcttcggcggc
cgcttcatgaacttcatcaaggaggctcaatgggaaggattaactggacggattgttttc
aacaaaaccagtggcttacggacggatttcgatctggacatcattagcctgaaggaagat
ggcctggagaaggttggggtgtggagtcctgccgaggggctcaacatcacagaggtcgcc
aaaggccgaggccctaatgtcaccgactctctgacaaaccggtccctcatcgtcaccacc
gtgctggaggagccctttgtcatgttccggaagtctgacaggaccctgttcgggaatgac
cggttcgagggctactgcatcgacctgctgaaggaactggcccacatcctgggcttctcc
tacgagatccggctggtggaggacggcaaatacggggcgcaggacgacaagggccagtgg
aacggcatgatcaaggagctcatcgaccacaaggcagatctggccgtggcccccctgacc
atcacccacgtccgcgagaaggccatcgacttctccaagcccttcatgaccctcggtgtg
agcatcctgtatcgcaagcccaatggcaccaaccccagtgtcttctccttcctcaacccc
ctgtccccagatatctggatgtacgtgcttctcgcttacctgggggtcagctgtgtcctc
tttgtcatcgccaggttcagcccttatgagtggtacgacgctcacccctgcaaccccggc
tccgaagtggtagaaaataacttcaccctgctgaacagtttctggttcggaatggggtcc
ttgatgcagcaagggtctgaactgatgcccaaagccctgtccacgcgcatcattggtggc
atctggtggttcttcacgctcatcatcatctcgtcctacacggctaacctggctgccttt
ctgaccgtggagcgcatggaatcgcccatcgactctgccgatgacctggccaagcaaacc
aaaatcgagtatggggccgtcaaggatggagccaccatgaccttcttcaagaaatccaag
atctccaccttcgagaagatgtgggccttcatgagcagcaagccctcagcgctggtgaag
aacaacgaggagggcatccagcggacgctgacggccgactacgcgctgctcatggagtcc
accaccatcgagtacgtcacccagcggaactgcaacctcacccagattgggggcctcatc
gactccaagggctatggcatcggcacgcccatggggtccccatatcgggacaagatcacc
atcgccatcctgcagctgcaggaggaagacaagcttcacatcatgaaggagaagtggtgg
cggggcagcgggtgtccggaggaggaaaacaaagaggccagcgccctgggcatccagaag
atcgggggcatcttcattgtcctggccgccgggctggtcctgtctgtgctggtggctgtg
ggcgagttcgtgtacaagctccgcaaaaccgcagagcgagagcagcgttccttctgcagc
accgtggccgacgagatccgcttctcccttacctgccagcgtcgtgtcaagcacaagccg
cagcctcccatgatggtcaagaccgacgccgtcatcaacatgcacacgttcaatgatcgc
cggcttccgggcaaggacagcatgacttgcagcacatcactggcccctgtgttcccctag
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