Sus scrofa (pig): 100511735
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Entry
100511735 CDS
T01009
Symbol
RAPGEF1
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04015
Rap1 signaling pathway
ssc04510
Focal adhesion
ssc04722
Neurotrophin signaling pathway
ssc04910
Insulin signaling pathway
ssc05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100511735 (RAPGEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100511735 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
100511735 (RAPGEF1)
09156 Nervous system
04722 Neurotrophin signaling pathway
100511735 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
100511735 (RAPGEF1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
100511735
NCBI-ProteinID:
XP_005654650
Ensembl:
ENSSSCG00000005719
LinkDB
All DBs
Position
1:complement(271494243..271624609)
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AA seq
1094 aa
AA seq
DB search
MSGGLGLRRSPEMSGKIEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVKI
PEKPVNKEATDRFLPEGYPIPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVSA
LRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQSDPRIQHSSALSSSYSRVYQSLA
NLIRWSDQVMLEGVNSEDKEVVTAVKGVIKAVLDGVKELVRLTIEKQGHPSPTSPAKPSS
PACKPDGQSELPLTDRETEILSKTTRMSQSTEGLPDSTDQEVAPPKPPLPGIRVVDNSPP
PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPLGINRQDFDVDCYTQRRLSGGSHSYGG
ESPRLSPCSSIGKLSRSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQI
PQHAACHLSPLPEASGEAGXPFLGHPFQAPLGGCPQPDGPSAPGWPTDTPPALPEKKRRS
AASQTADGTGCRASYERHPSQYDNIAEDDLQTPGPGPHGPFTPFAAVLPFQQGGSSASVE
FVADFTAPEPAGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSVFYQTPQKEHIYQQKN
RLLMEVYGFNDSFSAGDAXHELAPPPALPPKQRQLESPAMKDGHLRDASSGSSAPGQEGR
DGGDRAPKSPDASESAQSEEEVDELSLIDHSEIMARLTLKQEGDDGPDVRGGSGDILLVH
ATETDRKDLVLYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLV
RVVDELCLVELTEEILKLLMDLVFRLVCNGELSLARVLRKNILDKVDQKKLLRCASSGQP
LAAKGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFT
EHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRR
LEWQKQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYI
DGKVNFSKRWQQFNILDSMRCFQQAHYDIRRNDDIINFFNDFSDHLAEEALWELSLKIKP
RNITRRKTDREEKT
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcctcggcctccggcgcagcccggaaatgtccggcaagatcgagaaagca
gactctcagcgttctcacctctcctccttcaccatgaagctgatggacaaattccactcg
cccaagatcaagaggacgccgtcaaagaagggaaaaccggcggaggtgtccgtgaagatt
ccagagaagcctgtgaacaaagaggcaacagacagatttctgccagagggctaccctatc
cccttggatctggagcagcaggcagtagaatttatgtccaccagtgctgtggcttccagg
tctcaaaggcagaagaacctgagctggctggaggagaaagagaaggaggtcgtcagtgcc
ttgcgctacttcaagaccattgtggacaagatggccattgacaagaaggtgctggagatg
ctccccggctcagccagcaaggtgctggaggccatcctgccgctggtgcagagcgacccg
cgaattcagcacagctcagccctctcctcctcctatagccgagtgtaccaaagtctcgcc
aacctcattcgctggtctgaccaggtgatgctagaaggtgtgaactcagaagataaagag
gtggtgacagctgtgaagggggtcatcaaagctgtgctggacggagtgaaggagctggtc
agactcaccatcgagaagcaggggcatccgtctcccacaagcccggcgaaacccagctcc
ccagcctgcaaacccgacggccagtccgagctccccctgacggaccgggagacggagatt
ctcagcaagaccacccgcatgtcgcaatccaccgaggggcttccagactccacggaccaa
gaagttgcgccgcccaagccccccttgcccggcattcgggtggtggataacagtcccccc
ccagcactgccaccgaagaaaagacagtcggctccgtcacctacccgcgtggccgtggtg
gcccccatgagtcgagccaccagtggctccagtttgcctcttggaattaataggcaggat
tttgatgtggactgttacacccagcgacgactgtcgggaggcagccactcgtatggcggc
gagtcgccccgcctgtcgccctgcagcagcatcggcaagctcagcaggtcggacgagcag
ctgtcctctctggacagggacagcgggcagtgctcccggaacacaagctgtgaaacactc
gatcattacgatcccgactacgaattcctccagcaagacctctcgaacgcagaccagata
cctcagcacgcggcctgccacctcagcccgctgccggaggcctcgggggaggccggcncc
ccgtttctcggccaccctttccaggcgcctctgggcggctgtccccagccggacgggccc
tcggccccggggtggccgacggacacgccgcctgcccttcccgagaagaagcgccggagc
gcggcctcccagacggcggacggcaccggctgccgggcgtcctacgagcgccacccgtcc
cagtacgacaacatcgccgaggacgacctgcagacccccggcccgggcccgcacggcccc
ttcacgcccttcgctgccgtcctgccctttcagcaaggaggttcctcggcctctgtcgag
ttcgtggctgacttcactgctcccgaaccggcgggggacccagaaaagccgccgcctctc
ccggagaagaagaacaaacacatgctggcctacatgcagctgctggaggactactcggag
ccgcagccctccgtgttctaccagacgccgcagaaggagcacatctaccagcagaagaac
aggctcctcatggaggtgtacggcttcaacgactccttcagcgccggcgacgccncccac
gagctcgcgccgccccccgccctgcccccgaagcagcggcagctggaatcgccagccatg
aaagatggacacctcagagatgcttcatcaggcagcagtgcccctgggcaggaaggcaga
gacggcggggacagggccccgaagtctccagacgcctccgagtcagctcagtcagaggag
gaagtggacgagctgtccctcatcgaccacagtgagatcatggccaggctgacgctcaag
caagagggtgacgacgggccagacgtccgtggagggtctggcgacatcctgctggtccac
gccaccgagacggacaggaaagatctggtgctgtactgcgaggccttcctcaccacctac
aggaccttcatcagccccgaggaactcatcaagaagctgcagtacaggtacgagaagttc
tcgcctttcgctgacacgttcaagaagcgcgtcagcaagaacacattcttcgtgctggtg
cgggtggtggacgagctctgcctagtggagctgacggaagagatcttgaagctgctgatg
gacctggtcttccgcttggtgtgcaatggggagctcagcctggcccgcgtgctgcgcaag
aacatcctggacaaggtggaccagaagaagctgctcaggtgtgccagctctggccagccc
ctggcagccaagggggtggcagccaggcccgggaccctgcatgacttccacagccatgag
atcgccgagcagctgacgctgctggatgccgagctgttctataaaatagagattcccgag
gttttgctttgggccaaagagcagaacgaggaaaagagccccaacttgacccagttcacg
gaacacttcaacaacatgtcctactgggtgcggtccatcatcatgttacaggaaaaggcc
caggacagggagcggctgctcctgaagttcatcaagatcatgaagcacctgcggaagctg
aacaacttcaactcctacctggccatcctctcggcactggactcggcgcccatccgccgg
ctggagtggcagaagcagacctcggagggcctggctgagtactgcacgctgattgacagc
tcgtcctccttccgcgcctaccgggccgccctctcggaggtggagccaccgtgcatcccc
tacctggggctcatcctgcaggacctcaccttcgttcacctgggaaacccagactacatc
gacgggaaggtgaatttttccaagcggtggcagcagtttaacatcctggacagcatgcgg
tgcttccagcaggcgcattacgacatccggaggaatgatgacatcatcaacttcttcaac
gacttcagcgaccacctggccgaggaggccctgtgggaactctctctgaaaatcaagccc
aggaacataacaaggagaaaaacagaccgggaagagaagacctag
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integrated database retrieval system
