Sus scrofa (pig): 100511746
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Entry
100511746 CDS
T01009
Symbol
PAPOLB
Name
(RefSeq) poly(A) polymerase beta
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100511746 (PAPOLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100511746 (PAPOLB)
Enzymes [BR:
ssc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
100511746 (PAPOLB)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
100511746 (PAPOLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
100511746
NCBI-ProteinID:
XP_005674606
LinkDB
All DBs
Position
3:complement(3696416..3700986)
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AA seq
640 aa
AA seq
DB search
MPFPVTTPGCQPPPPPPKRYGISSPISLAPPRETDCVLTQKLIETLKPFGVFEEEEELQR
RILILEKLNYLVKEWIRELSESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
PRHVDRSDFFTSFYDKLKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNI
LGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVW
DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSK
LFEAPSFFQKYKHYIALLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS
FPAPRESPDKEEFRTMWVIGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNSKMFEMD
MKIAAMHLRRKELHQLLPNHVLPQKKTPSPEGVRLTALGDGSLGLTADSEDSVSVSSFPG
AVKTGPVTGSSPGRSSPALAMMAAPVISAQVTDVSLQQANPSESPGSASSESIPHAGSLP
AILPPKPVVTRVISSTLLVNHPPRPSGSAAANIANPIVGV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttccggtgaccaccccgggatgccagccgccgccgccgccgcccaagcgctat
ggcatctcctcccccatcagcctggcgcccccccgggagactgactgcgtccttacccag
aagctgattgaaaccctgaagcccttcggggtgtttgaagaggaagaggaactgcagcgc
aggattttaattttggagaaattaaattatctggtcaaggagtggatacgagaactcagt
gaaagcaagagtcttccacaagctgtcattgaaaatgtgggagggaagatcttcacgttc
gggtcttacagattaggggtgcatacgaagggcgccgatatcgatgcgttatgtgtcgcc
ccgagacatgtcgatcgaagcgacttttttacctccttctatgataagttgaaactccat
gaagaagtaaaagatttaagggctgttgaggaggcctttgtgccagttatcaaactgtgt
tttgatgggatagagattgatattttgtttgcaaggttagcactgcagactattcctgaa
gatttggacctgagagatgacagtctgcttaaaaatttagatatcagatgcataagaagt
cttaacggttgccgggtaactgatgagattttacatctagtgccaaacattgacaacttc
agattaactctgagggccgtcaagttgtgggccaagtgccacaacatctattccaatata
ttaggtttcctaggaggtgtctcctgggcgatgctagtagcgagaacttgccagctttat
ccaaatgcaatagcatcaactcttgtacgtaagttcttcttggtgttttctgaatgggaa
tggccaaatccagtgctgctgaaagagcccgaagaacggaatcttaatttgcccgtgtgg
gacccgagagtaaaccccagtgataggtatcatctcatgcctataattacccccgcctac
ccacagcagaactccacatacaatgtgtctgtttcaacgaggatggtcatgattgaggag
tttaaacaagggctcgctatcacacacgagattttgctgagtaaggcggagtggtccaaa
ctttttgaagcaccaagcttctttcaaaagtacaagcattatattgcacttctagcaagt
gcaccaacagaaaaacagcatctggaatgggtgggcttggtggaatcaaaaatccgaatc
ctggtcggaagcctggagaagaatgaatttattacactggcgcacgtgaatcctcagtcc
tttccagcccccagggaaagtcctgacaaggaagaatttcgtaccatgtgggtgattggg
ttagtgttaaaaagacccgagaactctgacattctcagtatcgatctcacctacgacatc
cagtccttcaccgatacagtttatagacaggcagttaatagtaagatgtttgagatggac
atgaaaattgcggcgatgcacttgagaagaaaggaacttcatcagctgctaccgaaccac
gtgcttccgcaaaagaagacaccctcgccagaaggtgtcagattgacagctttgggtgac
ggcagcctcggcttgactgcagacagtgaagacagcgtgtctgtgtcttcatttcccggc
gctgtgaagactggcccggtgactggcagctctccaggcagaagcagtcctgccctcgct
atgatggcggcacctgtgatcagcgctcaggttactgatgtttccttgcagcaggcaaat
cccagtgaaagcccagggagtgcgtccagcgaaagcatccctcacgctggctcactacca
gccattctaccaccgaagcctgtggtcaccagagtcatttcctcaacccttctggtgaat
cacccccccaggccttccgggagcgcagcagcaaacatagccaatcctatagtaggggtc
tag
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