Sus scrofa (pig): 100511747
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Entry
100511747 CDS
T01009
Symbol
SETD1A
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1A
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00310
Lysine degradation
ssc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100511747 (SETD1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100511747 (SETD1A)
Enzymes [BR:
ssc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
100511747 (SETD1A)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100511747 (SETD1A)
HMT complexes
COMPASS/SET1 complex
100511747 (SETD1A)
COMPASS/SET1 complex (yeast)
100511747 (SETD1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
FitA-like_RHH
Motif
Other DBs
NCBI-GeneID:
100511747
NCBI-ProteinID:
XP_020942065
Ensembl:
ENSSSCG00000007782
LinkDB
All DBs
Position
3:complement(17463768..17490397)
Genome browser
AA seq
1705 aa
AA seq
DB search
MDQEGGGDGQKAPSFQWRNYKLIVDPALDPALRRPSQKVYRYDGIHFSVNDSKYIPVEDL
QDPRCHVRSKNRDFSLPVPKFKLDEFYIGQIPLKEVTFARLNDNVRETFLKDMCRKYGEV
EEVEILLHPRTRKHLGLARVLFTSTRGAKETVKNLHLTSVMGNIIHAQLDIKGQQRMKYY
ELIVNGSYTPQTVPTGGKALSEKFQGSGAATETTESRRRSSSDTAAFPAGTAVVGTPGNG
TPCSQDTSFSSSRQDTPSSFGQFTPQSSQGTPYTSRGSTPYSQDSAYSSSTTSTSFKPRR
SENSYQDSFSRRHFSASSAPTTTSAAIPATTAATAAASSSSSSLSSSSSSSSSSSSSHFR
GSDSNYPAYYESWNRYQRHASYPPRRATREEPSGAPFAENAAERFPPSYTSYLPPEPSRP
ADQDYRPPASEAPPPEPPEPGGGGGGGGPSPEREEARTSPRPASPARSGSPAPETTNESV
PFAQHSSLDSRIEMLLKEQRSKFSFLASDTEEEEENSATGPGARDAGSELPSGSGHGPCT
PPPAPANFEDVAPTGSGDPGAPRESPKANGQSQASPCSSGEDMEISDDDRGGSPPPAPTP
PXQPPPPPPPPPPPPPYLASLPLGYPPHQPAYLLPPRPDGPPPPXYPPPPPPPPHIYDFV
NSLELMDRLGAQWGGMPMSFQMQTQMLTRLHQLRQGKGLTAASAGPPSGAFGEAFLPFPP
HQEAAYGLPYALYTQGQEGRGAYSREAYHLPLPMAAEPLPSSSVSGEEARLPPREEAELA
EGKALPSAGTVGRVLATLVQEMKSIMQRDLNRKMVENVAFGAFDQWWESKEEKAKPFQNA
AKQQAKEEDKEKTKLKEPGLLSLVDWAKSGGTTGIEAFAFGSGLRGALRLPSFKVKRKEP
SEISEASEEKRPRPSTPAEEDEDDAEREKEVGEPGRPGTKPPKRDEERSKTQGKHRKSFA
LDSEGEEASQESSSEKDEEDEEEDEEDEEREEAMDAAKKETGASDGEDEESDSSSKCSLY
ADSDGENDSTSDSESSSSSSSTSSSSSSSSSSSSSSSSESSSEEEEEEEEQPATIPSAPS
PPRDVPAPLPAPAEEPEPERVADSPVTALPEQETSPARPAGSAEELPPSVPQPPPEPPAG
PPAPAPRPDERPSSPIPLLPPPKKRRKTVSFSAVEEVPAPEPPPAAPPQVKSPVPTSRKV
PRGVERTIRNLPLDHASLVKSWPEEVSRGGRNRAAGRGRSTEEEEAEPGTEVDLAVLADL
ALTPARRGLPTLPAGDDSEATETLDEADRPGPLLSHILLEHNYALAVKPPPSTPAPRPLE
PVPAPAALFSSPADEVLEAPEVVVAEAEEPKQQQQQQEEGEEEEEEEEESESSESSSSSS
SDGEGAIRRRSLRSHTRRRRPPPPPPPPPPPTYEPRSEFEQMTILYDIWNSGLDLEDMGY
LRLTYERLLQQTSGADWLNDTHWVHHTITNLSTPKRKRRPQDGPREHQTGSARSEGYYPI
SKKEKDRYLDVCPVSARQLEGADTQGTNRVLSERRSEQRRLLSAIGTSAIMDSDLLKLNQ
LKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQMVADMREKRYVQEGIGSS
YLFRVDHDTIIDATKCGNLARFINHCCTPNCYAKVITIESQKKIVIYSKQPIGVDEEITY
DYKFPLEDNKIPCLCGTESCRGSLN
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggaaggtgggggagatgggcagaaggccccgagcttccagtggcggaactac
aagctcatcgtggatcctgccttggaccctgccttgcgcaggccttctcaaaaggtgtac
cgctatgatggaattcacttcagtgtcaacgactcaaagtatataccagttgaagacctc
caagacccccgctgccacgtcaggtccaaaaacagagacttttccctcccagtccctaag
tttaagctggacgagttctacatcggacagatcccactgaaagaagtgactttcgcgagg
ctgaatgacaacgtgcgggagaccttcctgaaggacatgtgccgaaagtatggcgaggtg
gaagaggtcgagatccttcttcaccctcgtactcgcaagcacctgggcctggcccgtgtg
ctcttcaccagcactcggggagccaaggaaacagtcaaaaacctccaccttacctccgtc
atgggcaacatcatccacgcccagctcgacatcaaaggacagcaacgaatgaagtattat
gagctgatagtcaatggctcctacacccctcagacggtgcccactgggggcaaggctctg
agtgagaagttccaaggctctggtgcagccactgagacgactgaatcccgccgccgatcc
tcctccgacacagctgccttcccagcaggcactgctgtggtgggcactcctggcaatggc
accccctgttcccaggacacaagcttctccagcagccgacaagacaccccatcttccttc
ggccagttcacccctcagtcctcccaaggaaccccctacacgtctcggggcagcaccccc
tactctcaggactccgcctactccagcagcaccacttccacctccttcaagccccggcgg
tcagagaacagctaccaagattcgttctcccgccgccatttctctgcatcttcggccccc
acgaccacctctgcagccatccccgccaccacggcagccaccgccgccgcctcctcttct
tcctcctcgttgtcctcatcctcttcgtcgtcctcgtcttcctcatcctctcattttcgt
ggttcagactcaaactacccagcatattatgaaagctggaatcgctaccaacgccatgct
tcctacccaccccgccgggcaactcgggaggagccctcaggggcaccttttgctgaaaat
gcagctgagcgcttcccaccttcctacacctcctacttgcccccggagcccagccgccct
gctgaccaggactaccggcctcctgcctcggaagctccacccccagagcctccagaacct
ggtggaggtggcgggggcggggggcccagccccgagagagaagaagctcggacctccccc
cggccagcctcacccgcccgctctggctccccagccccagagaccaccaatgagagcgtg
cccttcgctcagcacagcagcctggattctcgcattgagatgttgctgaaggagcagcgc
tccaagttttctttcctggcctccgacactgaggaagaggaagaaaacagcgccacaggc
cctggtgccagagatgcggggagcgagctgccttctgggtcaggtcacggcccctgcacg
ccccctccagccccagcaaattttgaggatgtggcacccacagggagtggggacccagga
gctccccgggagtcacccaaggccaacggacagagccaggcttctccatgctcttctgga
gaggacatggaaatctccgacgatgaccggggcggctcaccccctccggcccccacaccc
cccnagcaacccccaccccctccccctcctccaccccctccccctccgtacctggcttcc
cttcccctgggttatcctccccaccagcctgcctacctcctcccaccccgacctgatggg
ccaccgcccccgnagtaccccccgcctcctccaccgcccccccacatctatgactttgtg
aactccctagagctcatggatcgacttggggctcagtggggagggatgcccatgtccttc
cagatgcagacccagatgttaactcggctccaccagctgcggcagggcaaaggattgact
gctgcctcagctggtccccccagtggggcctttggggaggccttccttccattcccaccc
caccaagaggcagcctatggcttaccctatgctttgtacacacaagggcaagaaggccga
ggggcgtactcccgggaggcctatcacctgcctttgcccatggcagccgagcccctgccc
tcctcctcagtctcgggagaagaggcccggctgcctcccagggaggaagcagagctggca
gagggcaaggccctaccatcggcaggcactgtgggccgcgtgctggccaccttagtccaa
gagatgaagagcatcatgcagcgagacctcaaccgcaagatggtggagaatgtggccttt
ggagcctttgaccagtggtgggaaagcaaggaagaaaaggccaagccattccagaacgca
gctaaacagcaagccaaggaggaggataaagagaagacaaagctcaaagagccaggcctg
ctgtccctcgtagactgggccaagagcgggggtaccaccggcattgaagcttttgccttt
gggtcagggctgcgaggggccctgcggctgccttctttcaaggtaaagcgaaaagagcct
tcagaaatttcagaggccagtgaggaaaagaggccccggccttctactcccgctgaagaa
gatgaagatgatgctgagcgagagaaggaggttggagagccagggcgtccggggaccaag
cccccgaagcgagatgaagagcgcagcaagacccagggcaagcaccgcaagtcctttgct
ctggacagcgagggagaggaggcgtcacaggagtcctcctcggagaaggatgaggaggat
gaagaggaagatgaggaagatgaagagcgtgaggaagccatggatgctgccaagaaggag
acaggggcatcagatggcgaggacgaggaaagcgattcgtcctccaaatgttctctgtat
gctgactcagatggcgagaatgatagcacgtcggactccgagagcagcagctcatccagc
tccacatcttcctcctcttcctcctcctcgtcgtcatcgtcctcctcctcatctgagtcc
tcctctgaagaggaagaagaggaagaggagcagcccgcaaccataccctcagcgccatcg
ccccctagagatgtccctgcgcccctgccagcacctgccgaggagcctgagccggaaagg
gttgcggactcccccgtcacagctctccccgaacaggagacgtctccggcaagaccggcg
ggatccgctgaggagctccctcccagcgtgccccagcctcccccggagccaccagctggg
cccccggcccctgccccccgccccgatgagcgcccctcctctcctatccccctcttgcct
ccacccaagaaacgccggaaaaccgtctccttctctgccgtggaggaggtgccagcccca
gagcctcccccggctgccccgccgcaggtcaagtctcccgttcccacctcccgcaaggtc
ccccggggcgtagagcggaccattcgcaacctgcccctggaccacgcatctctggtcaag
agctggccggaagaggtgtcccgaggaggcaggaaccgggccgcaggccgaggccgctcc
accgaagaagaagaggctgagccagggacggaagtggacctggcggtgctggccgacctg
gccttgaccccagcccggcgtgggctgcccaccctgccagccggcgacgactcagaggcc
acagagacattggacgaggcggaccgcccgggccccctgctcagccacatcctcctggag
cacaactacgccctggcggtcaagccgccgccctccacgccggcccctcggcctctggag
ccagttcctgcccccgcagccctcttcagctccccggcagacgaggtcctggaggcccct
gaggtggtggtggctgaggcggaggagccaaagcaacagcagcagcagcaggaagagggg
gaggaggaggaggaggaagaggaggagtcggagtcatcggagagcagcagcagcagcagc
agtgacggcgagggggccatccggcggcgcagcctccgctcccacacgagacgccggcgg
ccgcccccgccccccccacccccgccccctcccacctacgagccgcgcagcgagtttgag
cagatgaccatcctgtatgacatttggaactcgggcctggacttggaggacatgggctac
ctgcggctgacatacgagcggctgctgcagcagacgagtggggctgactggcttaacgac
acccactgggtccatcacaccatcaccaacctgagcactccaaaacgcaagcggcggcct
caggatgggccccgcgagcaccagacgggctcggctcgaagcgaaggctattaccccatc
agcaagaaggagaaggacaggtacctggatgtgtgccccgtctcggcccggcagctggaa
ggagccgacactcaggggacgaaccgtgtgctttcggagcgccggtcggagcagcggcgg
ctgctgagcgccatcggcacgtcggccatcatggacagcgacctgctgaagttaaaccag
ctcaagttccggaagaagaagctgcgatttggccggagccggatccacgagtgggggctg
tttgccatggaacccatcgcagccgacgagatggtcatcgaatatgtgggtcagaacatc
cgccagatggtggccgacatgcgggagaagcgctacgtgcaggagggcattggcagcagc
tacctgttccgggtggatcatgacaccatcatcgatgccacgaagtgtggcaacctggcg
aggttcatcaaccactgctgcacgcccaactgctatgccaaggtgatcaccatcgagtcg
cagaagaagatcgtgatctactccaagcagcccatcggtgtggacgaggagatcacctac
gactacaagttcccgctggaggacaacaagatcccgtgtctgtgcggcaccgagagctgc
cgcggctccctcaactga
DBGET
integrated database retrieval system
