Sus scrofa (pig): 100511754
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Entry
100511754 CDS
T01009
Symbol
TCF20
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor 20
KO
K24769
transcription factor 20
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100511754 (TCF20)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100511754 (TCF20)
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
100511754
NCBI-ProteinID:
XP_020947094
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All DBs
Position
5:6430217..6534948
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AA seq
1960 aa
AA seq
DB search
MLEGCWPAAVLLNSMQSFREQSSYHGNQQSYPQEVHGSSRIEEFSPRQTQMFQNFGGAGG
GSGSSGGSSSGGRRGTAAAAAAMASETSGHQGYQGFRKEAGDFYYMAGNKDPVATGTPQP
PQRRPSGPVQSYGPPQGSSFSNQYGSEGHVGQFQAQHSALGGVSHYQQDYTGPFSPGSAQ
YQQQPSSQQQQQVQQLRQQLYQSHQPLPQATGQPASGSSHLQPMQRPSTLSASATGYQLR
VGQFGQHYQSSAASSSSSSFPSPQRFSQSGQSYDGSYSVNAGSQYEGHNVGSNAQAYGTQ
SNYSYQPQSMKNFEQAKIPQGTQQGQQQQQQQQQQQQQQQQQQHPPQHVMQYPNSATKLP
LQSQVGQYSQPEVPVRSPMQFHQNFSPISNPSPAASVVQSPSCSSTPSPLMQSGENLQCG
QGSVPIGSRNRILQLMPQLSPTPSMMPSPNSHAAGFKGFGLEGVPEKRLTDPGLSSLSAL
STQVANLPNTVQHMLLSDALTPQKKTSKRPSSSSKKTDSGTNSEGSSQAEEQLKSPLAES
LDGGCSSSSEDQGERVRQLSGQSTSSDTTYKGGASEKAGSSPAQGTQNEAPRLSASPAAG
EETTSPGAKDTPVSSEGNPKVNEKTVGVIVSREAMTGRVEKPGGQEKGAQEEDPAATQRP
PSTGGAKETGHASLPQPEPPGGGSKGSKNGDNNSSHNGEGNGQSGHATGGSGFIGRTEPS
KSPGSLRYSYKDSFGSAVPRNVSGFPQYPSGQDKGDFPGHAERKGRNEKFPSLLQEVLQG
YHHHPDRRYSRSAQEHQGMAGGLEGATRPNVLVSQTNELASRGLLNKSIGSLLENPHWGP
WERKSSGTAPEMKQINLADYPIPRKFEIEPQSSAHEPGGSLSERRSVXCDISPLRQIVRD
PGAHSLGHMGADTRLGRNERLNPSLSQSVILPGGLVSMETKLKSQSGQIKEEDFEQPKXQ
ASFNNKKSGDHCHPASIKHESYRGNASPGAAAHDAISDYGPQDSRPMPLRRVPGRVGGRE
GMRGRSPSQYHDFSEKLKMSPGRSRGPGGDPHHMNPHMTFSERANRSSLHTPFSPNSESL
ASAYHTNTRAHAYGDPNAGLNSQLHYKRQMYQQQQEEYKDWSSTSAQGVIAAAQHRQEGP
RKSPRQQQFLDRVRSPLKNDKDGMMYGPPMGTYHDPSGQEGGRCLMSSDGLSNKGIELKH
GSQKLQQESCWDLSRQTSPAKSSGPPGMSSQKRYGPPHETDGHGLAESAQSSKPGNVMLR
LPGQEDHSSQNPLIMRRRVRSFISPIPSKRQSQDVKNSNTEDKGRLLHPLKEGADKAFNS
YAHLSHSQELKSIPKRESSKDLPSPDSRNCPAVTLTSPAKTKILPPRKGRGLKLEAIVQK
ITSPNIRRSASSNSAEAGGDTVTLDDILSLKSGPPEAGSVAAPDAEMEKRKGAGVSDLVG
PTSQESSVEKPLARSSEEWRGGGDDKVKTEAHLDSVTAGKEPAGAMTSATSQKPGSNQGR
PDGSLGGTAPLIFPDSKNVPPTGILAPEANPKAEEKENDTATISPKQEGFPPKGYFPSGK
KKGRPIGSVNKQKKQQQPPPPPPQPPQIPEGSADGEPKPKKQRQRRERRKPGAQPRKRKT
KQAVPIVEPQEPEIKLKYATQPLDKTDAKNKSFFPYIHVVNKCELGAVCTIINAEEEEQT
KLVRGRKGQRSLTPPPSSTESKALPASSFMLQGPVVTESSVMGHLVCCLCGKWASYRNMG
DLFGPFYPQDYAATLPKNPPPKRATEMQSKVKVRHKSASNGSKTDTEEEEEQQQQQKEQR
SLAAHPRFKRRHRSEDCGGGPRSLSRGLPCKKATTEGSSEKTALDSKPSVSTTSEGGPEL
ELQIPELPLDSNEFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLG
CYNKGCSFRYHYPCAIDADCLLHEENFSVRCPKHKVRLWR
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atgctggagggctgttggcctgctgctgttctgctgaacagtatgcagtcctttcgggag
caaagcagttaccacggaaaccagcagagctacccacaggaggtacacggctcatcccgg
atagaagagttcagccctcgtcagacccagatgttccagaattttgggggtgcaggtggc
ggtagtggcagcagtggcggcagcagcagtggtgggcgacgaggcacagcggctgctgct
gcagcgatggctagtgaaacctccggccatcaaggctaccagggtttcaggaaagaagct
ggagacttttactacatggcaggcaacaaagaccccgtggccacgggaaccccgcagcct
cctcagcgaaggccttctgggcctgtgcagagctatggacccccccaggggagcagcttc
agcaatcagtatgggagtgagggtcatgtgggccagtttcaagcacagcactctgccctt
ggtggtgtgtcgcattatcagcaggattacactgggcctttctctccagggagtgctcag
taccagcagcagccttccagccaacagcagcagcaagtacagcagttgagacaacagctt
taccagtcccatcagcccctgccacaagccactggccagccagcatctggctcgtcccat
ctgcagccaatgcagcggccctcaaccttgtcagcctctgctactggttaccagttgaga
gtaggtcagtttggccaacactaccagtcttctgccgcctcctcctcctcctcctccttc
ccttcaccacagcgttttagccagtctggacagagctatgacggcagttacagtgtgaat
gctggatcccagtacgaaggacataatgtgggctctaacgcacaggcttatggaacacaa
tcaaattacagctatcaacctcaatctatgaagaatttcgaacaggcaaagattcctcaa
gggactcagcaggggcagcagcagcagcagcagcagcagcaacagcagcagcagcagcag
cagcaacagcatccccctcagcatgtgatgcagtatcccaactctgccaccaagttgccc
ctgcagagccaggtggggcagtacagccagcccgaggttcctgtgaggtcccccatgcag
tttcaccagaacttcagccccatctctaacccttccccagctgcctctgtggtccagtct
ccaagctgtagctctaccccctctcctcttatgcagagtggggagaatctccagtgtggg
caaggcagtgtgcccataggctccagaaaccgaattctgcagttaatgcctcagctcagc
ccaaccccatcaatgatgcccagtcctaattctcacgctgcaggcttcaaagggtttgga
ctagaaggggtgccagaaaagcggctgacagatcctgggttgagtagtttgagtgccctg
agcactcaagtggccaatcttccgaacactgttcagcacatgctactttctgacgccttg
acccctcagaagaagacctccaagaggccctcctcatcttctaagaaaacagacagcggc
acaaattcggaaggctcctcgcaggctgaagaacagctcaagtctccgctggcagagtct
ctggatggaggctgctccagcagctccgaggatcaaggcgagcgggtgaggcagctgagc
ggccagagcaccagctctgacaccacctacaagggtggagcctcagagaaagcaggctcc
tcaccagcacaaggcactcagaacgaagcccccagactcagcgccagtcctgcagccgga
gaagagaccacctcaccaggtgctaaggacacgccggtgtcgtctgagggcaatcccaaa
gtcaacgagaagacggttggggtgatcgtctcccgggaagctatgacaggtcgggtagaa
aagcccggtgggcaagagaaaggcgcccaagaggaggatcctgcagccactcaaaggcca
cccagcactggcggggccaaggagaccggccacgcgtcccttccacagccagagcctcca
ggaggagggagtaaaggaagcaagaacggagataacaactccagccacaacggagaagga
aatggccagagtgggcacgccacggggggctctggttttattggcagaactgagcccagc
aaatctcctgggagcttgcgttatagttacaaagatagttttgggtcagctgtgccaaga
aacgtcagtggctttcctcagtatccttcaggacaagataagggggacttccctggccac
gcggagcgaaagggtcggaatgagaagttccccagcctcctgcaggaagtgcttcagggt
tatcaccaccaccccgaccgcaggtattctaggagcgctcaggagcaccagggcatggcc
gggggcctggaaggagccacgaggcctaatgtcctagttagtcaaaccaatgaattagcg
agcaggggccttttgaacaaaagcattgggtccctcctagaaaacccccactggggcccc
tgggaaaggaaatcaagcggcacagcccccgaaatgaaacagatcaacttggctgactat
ccaattcccagaaagtttgagatcgagcctcagtcatcagcccatgagcccgggggttcc
ctctctgagaggagatccgtgnattgtgacatttctccactaagacagattgtcagggac
ccaggggctcactcactgggacacatgggtgccgacaccagacttgggaggaatgaacgt
ctcaatccaagtttaagtcagtcagtcattcttccaggtgggctggtgtccatggaaaca
aagctgaagtcccagagtgggcagataaaagaggaagacttcgaacagcccaaantgcaa
gctagcttcaacaacaaaaaatctggagaccactgccaccctgccagcatcaagcatgag
tcttaccgaggaaacgccagccctggggcagcagcccatgatgccatctcagactacggc
ccacaggacagcaggcccatgccgttgcggcgggtccctggcagagttggtggtcgggag
ggcatgaggggtcggtccccttctcagtaccatgacttttcagaaaaattgaagatgtct
cctgggaggagcagaggcccggggggagacccccaccacatgaacccacacatgaccttt
tcagagagggccaacaggagttctctgcacactcccttttctcctaactcagaaagcctg
gcctctgcgtatcacacaaacactcgtgctcacgcttatggggaccccaatgcaggtttg
aattctcagctccactataagagacagatgtaccaacagcagcaagaggagtataaagac
tggagcagcacttctgctcagggagtcatcgctgcggcacagcacaggcaggagggaccc
cggaagagcccaaggcagcagcagtttctcgaccgagtacgaagccccctgaagaatgac
aaagatggcatgatgtatggcccaccgatggggacttaccatgacccgagtggtcaggag
ggtgggcgctgcctcatgtctagcgatggtctttctaacaaaggcattgagttgaagcac
ggctcccagaagttacagcaggaatcttgttgggatctttctcggcaaacttctccagcc
aaaagcagcggtcctccaggaatgtccagtcaaaaaaggtatggcccgccccatgagact
gatggacacgggctagctgagtctgcacagtcatccaaacctggtaatgttatgctaagg
cttccaggtcaggaggatcattcttctcagaaccccttaatcatgaggaggcgtgtccgt
tcgttcatctctcccattcccagtaagagacagtcacaagacgtgaagaacagtaacacg
gaagacaaagggcgcctccttcacccactgaaagaaggcgctgataaagcgttcaattcc
tatgcccacctttctcacagtcaggagctcaagtccatccccaagagagaatcctccaaa
gaccttccaagtccggatagtagaaactgccctgctgttaccctcacaagtcctgcgaag
accaaaatactacccccgcggaaaggacgggggttgaagttggaagctatcgtgcagaag
atcacctccccgaacatcaggaggagcgcctcctccaacagcgccgaggctgggggagac
acggtcactctcgatgacatcctgtctctgaagagcggccctcccgaagctgggagcgtc
gctgctccggatgcggagatggagaagagaaaaggtgcaggggtatctgacctggtgggt
cccaccagccaggagtcgagcgtggaaaagcctctggcccggtcctcagaggagtggcgc
ggcggtggggacgacaaagtgaagaccgaggcacacctagactcggttactgctggaaag
gaacccgctggtgccatgacgtccgcaacctcacagaagcctgggagtaaccaagggaga
ccagatggctccctgggcgggacagcacctttaatctttcctgactccaagaatgtgcct
ccaacgggcatcctggctcctgaggcgaaccccaaggctgaagagaaggagaacgataca
gcgaccatctcccccaaacaggagggcttccccccgaagggttacttcccatcgggaaag
aagaaggggagacccattggtagtgtgaataagcaaaagaaacaacagcagccaccgcct
ccaccccctcagccccctcagataccagaaggttctgcagatggagagccaaagccaaaa
aagcagaggcaaaggagggagagacggaagcctggggcacagccaaggaagcggaaaacc
aaacaggcagttcccatcgtagaaccccaagaacccgagatcaaactgaagtatgccacc
cagccactggataaaaccgatgccaagaacaagtcctttttcccttatatccatgtagta
aataagtgtgaacttggagccgtttgtacaatcatcaatgctgaggaagaggagcagacc
aaattggtgaggggtcggaagggtcagaggtccctgacccctccacccagcagcacggag
agcaaggcgctcccagcttcgtccttcatgctgcagggacctgtggtgacagagtcctct
gttatggggcacctggtttgctgtctgtgtggcaagtgggccagttaccggaacatgggt
gacctctttggacccttttacccccaagattatgcagccactctccccaagaatccgcct
cctaagagggccacggaaatgcagagcaaagttaaggtacggcacaaaagcgcttcaaat
ggctccaagacggacactgaggaggaggaagagcagcagcagcagcagaaggagcagagg
agccttgccgcccaccccaggtttaagcggcgacaccgctcggaagactgtggcggaggc
ccccggtccctgtccagggggctcccttgtaaaaaagcaaccaccgagggcagcagtgaa
aagactgccttggactcaaagccctccgtgtccaccacttcagaaggcggccccgagttg
gagttacaaatccctgaactacctcttgacagcaatgaattttgggtccatgagggttgt
attctctgggccaatggaatctacctggtctgtggcaggctctacggcctgcaggaagcg
ctggaaatagccagagagatgaaatgttcccactgccaggaggctggcgccaccttgggc
tgctacaacaaaggctgctccttccgataccattacccgtgtgccattgacgcagattgt
ttgctccatgaggagaacttctcggtgaggtgccccaagcacaaggtgagactgtggaga
tga
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