Sus scrofa (pig): 100511850
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Entry
100511850 CDS
T01009
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100511850 (SEMA6D)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
100511850
NCBI-ProteinID:
XP_005654509
Ensembl:
ENSSSCG00000004663
UniProt:
A0A8D1Z4C3
F1SN61
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All DBs
Position
1:complement(123987528..124586062)
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AA seq
1086 aa
AA seq
DB search
MRFFLLCAYMLLLMIPQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVVPNKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRIRYR
LTAIAVDHSAGPHQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE
NEEDRKVLSLQLDKDHHALYVAFSSCVIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGA
CGRVMPGMLLLTEDFFAFHNHSAGGFEQDTEFGNTAHLGDCHEILPTSTTPDYKIFGGPT
SDMEVSSSSVTTMASIPEITPKVIDTWRPKLTSSRKFVVQDDPNTSDFTDPLSGIPKGVR
WEVQSGDSNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSC
TDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGETKSMVMDHRGQPPE
LAALPTPESTPVLHQKTLQAMKSHSDKVHGHGASRKETSQFFPSSPPPHSPLSHGHIPSA
IVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLN
DPNSNPKAIMGDIQMAHQTLMLDPVGPMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDV
PTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLSSPNGVLLSRQPSVNRGGYMATPTGA
KVDYVQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRP
LNKYTY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcttcctgctttgtgcctacatgctcctgctgatgatccctcagttgagggca
gtcagctttcctgaagatgatgaaccccttaatactgttgactatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaatgaatcacagcacaggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtttatacggta
aacttaaatgaaatccccaaaacagaagtcgtaccaaacaagaaactgacatggcggtca
aggcaacaggatcgagaaaactgtgctatgaaaggcaagcataaagatgaatgccacaat
tttattaaagtatttgttccaagaaacgatgagatggtttttgtttgtggcaccaatgca
tttaatcccatgtgtagatactataggttgaataccttggagtatgatggggaagaaatt
agtggcttggcaagatgcccatttgatgccagacaaaccaatgttgccctttttgctgat
gggaagctgtattctgccacagtggctgacttcttggccagcgatgctgttatttatcga
agcatgggtgatggatctgcccttcgtacgataaaatatgattccaaatggatcaaagag
ccacactttcttcatgccatagaatatggaaactatgtgtatttcttctttcgagaaatc
gctgtggaacataataatttaggcaaggctgtgtattcccgtgtggcccgcatatgtaaa
aacgacatgggtggctcccagcgggtcctggagaaacactggacttcatttctgaaggct
cgacttaattgttctgtccccggagattcatttttctactttgatgttctgcagtctatt
acagacataatacaaatcaatggcatccccactgtggtcggggtgtttactacacaactc
aacagcatccctggttcggcagtgtgtgcatttagcatggatgacatagaaaaggtattc
aaaggacggtttaaagagcagaaaactccggattctgtttggacagcagtccctgaagac
aaagtaccaaagccaaggcctggctgttgtgcaaagcatggtcttgctgaagcttataaa
acctccatcgatttcccggatgaaaccctgtcgttcatcaaatcccaccccctaatggac
tctgctgtcccacccattgcagacgaaccctggttcacaaagactcggatcaggtacaga
ctgacggccattgccgtggaccattctgccggaccccaccagaactacacagtcatcttt
gttggctcagaagctggcgtggtacttaaagttttggcaaagaccagtccattctctttg
aatgacagcgtgttactggaagagattgaggcatacaaccatgcaaaatgcagtgctgag
aatgaggaggaccgaaaggtcctgtccttacagttggataaagatcatcatgctctgtac
gtggccttctctagctgtgtcatccgcatccccctcagtcgctgcgagcggtacggatcc
tgtaaaaagtcttgtattgcatctcgagacccatactgtggctggttaagccagggggcc
tgtggtcgagtgatgccggggatgctgctgttaaccgaagacttctttgctttccataac
cacagcgctggaggatttgagcaggacacggaatttggcaacacggcccatctaggggac
tgccacgaaattttgcctacttcaactacaccagattacaaaatatttggcggtccaaca
tctgacatggaggtatcttcatcttctgttaccacaatggcaagtatcccagaaattaca
cctaaagtgattgatacctggagacctaaactgaccagctcccggaaatttgtagttcaa
gatgacccaaacacttctgattttactgatcctttatcaggtatcccaaagggtgtacga
tgggaagtccaatctggagactccaaccagatggtccacatgaatgtcctcatcacctgt
gtctttgcggcttttgttttgggtgcattcattgcaggtgtggcagtatactgctatcgg
gacatgtttgttcggaagaacagaaagatccataaagatgcagaatctgcccagtcgtgc
acagactccagtggaagctttgccaagctgaatggtctctttgacagcccagtcaaggaa
tatcaacagaatattgattctcccaaattgtacagtaacctgctgaccagtcggaaagag
ctgccgcccaatggggaaacaaaatccatggtcatggaccatcgaggccaacctcctgag
ttggctgctctccctacacctgagtccacacctgtgcttcaccagaagaccttgcaggcc
atgaagagccactcagacaaggtccacggccatggggcttcgaggaaagaaacttcccag
ttttttccttctagtcctccaccccactccccactaagtcatgggcacatccccagtgcc
attgttctccctaatgctacccatgactacaacacatctttctcaaactccaatgctcac
aaagctgaaaagaagcttcaaaacattgaccaccctctcacaaagtcatccagtaaaaga
gatcaccggcgttctgtggattccagaaatacccttaatgatctcctgaagcatctaaat
gacccaaacagtaaccccaaagccatcatgggagacatccaaatggcccaccagacccta
atgctggatcctgtgggacctatgtccgaggtcccgcccaaagtccctaaccgtgaggct
tcgctctactctcctccctcaacgctccccaggaatagcccaactaagcgagtggacgtc
cccaccactccaggagtcccgatgacttctctggaaagacaaaggggttatcataaaaac
tcctcccagaggcactctatatctgctatgcctaaaaacttaagctcaccaaatggggtt
ttgttatctagacagcctagtgtgaaccgtggggggtacatggccacccccacgggggcg
aaggtggactatgttcagggaacaccggtgagtgttcatctgcagccttccctctccaga
cagagcagctacaccagtaatggcacccttcccaggacgggactaaagaggacaccgtcc
ttaaaacctgacgtgccaccaaagccttcatttgttcctcagaccacatctgtcagacca
ctgaacaaatacacgtactag
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