Sus scrofa (pig): 100511875
Help
Entry
100511875 CDS
T01009
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100511875 (EXOSC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100511875 (EXOSC4)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100511875 (EXOSC4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
100511875 (EXOSC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100511875
NCBI-ProteinID:
XP_003125499
Ensembl:
ENSSSCG00000005925
UniProt:
A0A4X1USC5
F1RSL0
LinkDB
All DBs
Position
4:complement(618993..621336)
Genome browser
AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRVDGRRARELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG
SRSRALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQAFEAAILTQLHPRSQ
IDIYVQVLQADGGIYAACVNVATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAA
GGPQLALALLPASGQIALLEMDARLHEDHLEQVLEAAAQAARDVHTVLDRVVRQHVQEAS
ILLGD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggagctgctgtcggaccagggctaccgtgtggacgggcggcgcgcccgg
gagctgcgcaagatccaggcgcggatgggtgtgtttgcgcaggccgacggctcggcctac
atcgagcagggcaacaccaaggcgctagcggtggtctacgggcctcacgagatccggggc
tcgcgatcacgagccctgccggacagggccttggtgaactgtcagtacagttctgcgacc
ttcagcacaggtgagcgcaagcggcggccacatggggaccgaaagtcctgcgagatgggc
ctgcagctgcgtcaagcctttgaggcagccatccttacacagctgcatcctcgctcccag
attgatatctacgtgcaggtgctgcaggcagatggtgggatctatgcggcttgtgtgaac
gtggccacactggcagtgctggacgccgggatacccatgcgggactttgtatgtgcctgc
tcagctggctttgtggatgggacagccctggcagacctcagccatgtggaggaagcagct
ggtggcccccagctggccctggccctgctgccagcctcaggccagatcgcactgctggag
atggatgcaaggcttcatgaggaccacctggagcaggtgctagaggccgctgcccaggcc
gcccgagatgtgcacaccgtactggaccgtgtggtccggcaacacgtacaagaggcctcg
atcttgctgggggactga
DBGET
integrated database retrieval system