KEGG   Sus scrofa (pig): 100511875
Entry
100511875         CDS       T01009                                 
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100511875 (EXOSC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100511875 (EXOSC4)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100511875 (EXOSC4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     100511875 (EXOSC4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 100511875
NCBI-ProteinID: XP_003125499
Ensembl: ENSSSCG00000005925
UniProt: A0A4X1USC5 F1RSL0
LinkDB
Position
4:complement(618993..621336)
AA seq 245 aa
MAGLELLSDQGYRVDGRRARELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG
SRSRALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQAFEAAILTQLHPRSQ
IDIYVQVLQADGGIYAACVNVATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAA
GGPQLALALLPASGQIALLEMDARLHEDHLEQVLEAAAQAARDVHTVLDRVVRQHVQEAS
ILLGD
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcggggctggagctgctgtcggaccagggctaccgtgtggacgggcggcgcgcccgg
gagctgcgcaagatccaggcgcggatgggtgtgtttgcgcaggccgacggctcggcctac
atcgagcagggcaacaccaaggcgctagcggtggtctacgggcctcacgagatccggggc
tcgcgatcacgagccctgccggacagggccttggtgaactgtcagtacagttctgcgacc
ttcagcacaggtgagcgcaagcggcggccacatggggaccgaaagtcctgcgagatgggc
ctgcagctgcgtcaagcctttgaggcagccatccttacacagctgcatcctcgctcccag
attgatatctacgtgcaggtgctgcaggcagatggtgggatctatgcggcttgtgtgaac
gtggccacactggcagtgctggacgccgggatacccatgcgggactttgtatgtgcctgc
tcagctggctttgtggatgggacagccctggcagacctcagccatgtggaggaagcagct
ggtggcccccagctggccctggccctgctgccagcctcaggccagatcgcactgctggag
atggatgcaaggcttcatgaggaccacctggagcaggtgctagaggccgctgcccaggcc
gcccgagatgtgcacaccgtactggaccgtgtggtccggcaacacgtacaagaggcctcg
atcttgctgggggactga

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