Sus scrofa (pig): 100512030
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Entry
100512030 CDS
T01009
Symbol
CDAN1
Name
(RefSeq) LOW QUALITY PROTEIN: codanin-1
KO
K19531
codanin-1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100512030 (CDAN1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100512030 (CDAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
Motif
Other DBs
NCBI-GeneID:
100512030
NCBI-ProteinID:
XP_020952813
Ensembl:
ENSSSCG00000004719
LinkDB
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Position
1:128641411..128655556
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AA seq
1230 aa
AA seq
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MAAVLESLLREELSVAAAVRWIAHSAQSSEDDPGEAAALSSLRPLRKEFVPFLLNFLREQ
SSRVLPQGPPTPAKAPGSSAALPGRPGGPPRGGRGARSQLFPPTEPSSAAAAEAPSARRG
GRRRGPGPARERGGGPRGLEEGVSGESLPWAGGRRPKSSGSPSSPSLARSDPPNLSNLEE
FPPVGSVPPGSAGTKPSRRINPTPVSEERSLSKPKTCFTSPPINCVPSSQPSVLDTSPWG
HGLPSGCRSLQEEREMLRKERSKQLQQSSAPACPTPESGCPHPMRTGNLTAEPADPARVS
YRRRLELVALVYSSCIAENLVPNLFLELFFVLQLLTARRMVVAKDSDLEPSPGPIDSLES
PLFQSVHDCVFFAVQVLEHQFHILSHLDKGTLKLLAENERLLCFSPVLQGRLRAAYEGSV
AKVSLAMPPSAQAVSFQPETDNRANFSSDRAFHTFKKQRDVFYEVLREWEDRHEEPGWDF
EKGLGSRIRAMMSQLSAACSHSHFVRLFQKQLLQMCQSPGGAGGTVLGETPDVLNMLGAD
KLGRLRRLQERLVAPQSSGGPCPPPTFPGCQGFFRDFILSASSFQFNQHLMDSLSLKIRE
LNSLALPQPEPSDEDGESDVDWQGERRQFAVVLLSLRLLAKFLGFVAFLPYRGPEPPPTR
ELQDSILALRSQVPPALDVRALLQQGLRARRAVLTVPWLVEFLSLADHIVPMLDYYRSIF
TLLLHLHRSLVLSKESEGEMCFLNKLLLLAVLGWLFQIPTVPEDLFFLGDGQLDAFEVNT
VVSEHGLDSMPVVDQHLLYTCCPYIGELRKLLASWVSGSSGRSGGFVRKITPTTTTGLGA
QPPRTTQGLQAQLAQAFFHNQPPSLRRTVEFVAERIGSNCVKHIKATLVADLVRQAESLL
QEQLVTQGREGGDPAQLLEILCSQLCPHGAQALTLGREFCQKKSPGAVQALLPEETPAAV
LSSAENIAVGLATEKACAWLSANITALIRREVKAAVSRTLRAQGPESATRGERRGCSRAC
EHHAPLPSHLISEIKDVLSLAVGPRDPEEGVSPEHLERLLGQLGETLQCRQFLCPPAEQH
LAKCSVELASLLVADQIPVLGPPAQHRLERGQARRLLLMLLSLWKDDFQVPVPLQLLLSP
RNVGLLADTRPREWDLLLFLLRELVEKGLMGRMEIEACLGGLHEAQWPGDFVEELATLFN
LFPAEPQVPEPQLRACELVQPNRGTLLAQS
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgttttggagtcgctgctgagagaggagctgtcggtcgcagccgccgtgcgg
tggatcgcgcacagcgcccagagttcggaggatgaccccggggaggcggccgcgctgagc
tcacttcggccactacggaaggaattcgttccattcctgctgaacttcctgagggagcag
agcagccgcgtcctcccgcagggccccccaacccccgccaaggcccctggctcctccgca
gccttgccagggaggccggggggcccgccgcgggggggccgcggagcgcgcagccagctc
ttccctccgacagagccttcgagcgctgccgcagctgaggccccttcggcccgccgtggg
ggcaggaggcggggcccggggccggcccgcgagcgtggaggcgggccccggggcctggag
gagggagtcagcggggagagcttaccctgggccggaggccgaaggcccaagagctccggc
agccccagcagccctagcctcgcgcgctctgacccgccaaacctcagcaacctggaggag
ttccctcccgtaggctcggttcctccgggctctgcagggaccaagccttcacgcaggatc
aacccaactccggtgagcgaagagcggtcactctccaagcccaagacttgcttcacctca
cccccaatcaactgtgtccccagttcccaaccctcagtcctggacactagcccttggggc
catggcctcccctcagggtgcagaagtctccaagaggagcgggagatgctcaggaaggag
cgttctaagcagctgcagcagtcatctgctcctgcctgtccaaccccagaatcagggtgc
cctcaccccatgcggacaggaaacctcacagctgaacctgctgaccctgccagagtgtct
taccgccggcgcctggagctagtagcccttgtctactcttcatgcattgcagagaacctg
gtaccaaacctcttcttagagcttttcttcgtccttcaacttcttactgcccggagaatg
gtggttgccaaggatagtgaccttgaaccaagtccaggacccatagattccctggaaagc
ccgctgttccagagtgtccatgattgtgtcttctttgctgtgcaggttttggagcatcag
tttcacattctttcccacctggacaaagggaccctgaagctgttggctgagaatgagcgg
ctattatgcttctcaccagttctgcaaggccgcctccgagctgcctatgagggcagcgtt
gccaaggtctctctggcgatgcctccgtctgctcaagctgtctcctttcagccagaaact
gacaatcgtgccaacttttccagtgaccgagcctttcatacttttaaaaaacagagggat
gtattttatgaggtgcttcgagagtgggaagaccgccacgaggagcccggctgggatttt
gagaagggcttgggcagcaggatcagagccatgatgagtcaactctctgcagcctgcagc
cacagccattttgttcgacttttccaaaaacaacttctccagatgtgtcagagtcctggt
ggtgctgggggcaccgtcttgggtgagactccggatgtgttaaatatgcttggagctgac
aagctagggcggctgaggcgcctacaggaacggcttgtggcccctcagagcagcgggggt
ccctgcccaccccccactttcccaggctgtcagggcttcttcagagacttcatcttaagt
gccagcagcttccagtttaaccagcatctcatggatagtcttagtttgaagatccgggag
ctcaacagccttgccctgcctcagcctgagcctagtgatgaagacggagagtcagacgtg
gactggcagggtgaacggaggcaatttgctgtggtgctgctcagcctgaggcttctggct
aaatttcttggctttgtggcttttctgccataccgggggcccgaaccacccccgacccgt
gagctccaggactccattctggccctgaggagccaggtgcccccagccctagatgtgcgg
gctctgctgcaacaggggctacgggcccgccgagcagtgctcacggtgccctggctggtg
gagttcctttccctcgcagaccacattgtccccatgctggactattaccgcagcatcttc
accctcctgctgcacctgcatcggagcttggtcttgtcaaaagaaagtgaaggggagatg
tgttttctgaacaagctgttgctgctggctgtcctgggctggcttttccagattcccaca
gtccctgaggacctgttctttctgggagatggtcagttggatgcctttgaggtgaacaca
gtagtttcagagcatggcttggacagcatgcctgtcgtggaccagcacctgctctacacc
tgctgcccctatattggagagctccgcaaactgctggcttcatgggtatcaggcagcagt
gggcggagtgggggcttcgtgaggaaaatcacccccaccaccaccactgggctgggggcc
cagcctccccggaccacccaggggctgcaggcacagctggcccaagccttcttccacaac
cagccgccatccctgcgcaggactgtggagtttgtggcagagagaattggctctaactgt
gtcaagcatatcaaggccacactggtagcagatctggtgcgccaggcagagtcgcttctt
caggagcagctggtgacgcagggacgagaagggggagacccagcccagctgttggagatc
ttgtgttcccagctgtgcccccacggggcccaggcattgaccctggggcgggagttctgc
caaaagaagagcccaggtgccgtgcaggcattgctccctgaggagaccccggcagccgtt
ctgagcagtgcagagaatattgccgtggggcttgcaacagagaaagcctgtgcttggctg
tcagccaacatcacagcactgatcaggagggaggtgaaggcagctgtgagtcgcacactt
cgagcccagggtcctgagtcggccacccggggggagcggaggggctgctcccgtgcctgt
gagcaccatgctcccctcccctcccacctcatctccgagataaaagatgtgctctctctg
gccgtggggccccgggaccctgaggagggagtttccccagagcatctggagcggctccta
ggccagctgggcgagacgctgcagtgccgccagttcctgtgcccacctgctgagcagcat
ctggcaaagtgctctgtggagttagcgtccctccttgttgcagatcaaattcctgtcctg
ggccccccggcacaacaccggctagagagagggcaggctcgaaggctcctgctcatgctg
ctttccctgtggaaggatgacttccaggtgccagttccgctgcagctgctgctgagccca
agaaatgtgggccttctggcagacactcggccgagggagtgggacctgctgctgttcttg
ctccgggagctggtggagaagggtctcatgggacggatggagatagaggcctgcctgggc
ggcctccatgaggcccagtggccgggggattttgttgaagaattagcaacactcttcaac
ctgtttccagctgagcctcaagtgccagagccccagctgagagcttgtgagttggtgcag
ccaaaccgggggactctgctggcccagagctag
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integrated database retrieval system