Sus scrofa (pig): 100512044
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Entry
100512044 CDS
T01009
Symbol
SLC5A7
Name
(RefSeq) high affinity choline transporter 1 isoform X2
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04082
Neuroactive ligand signaling
ssc04725
Cholinergic synapse
ssc05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100512044 (SLC5A7)
09150 Organismal Systems
09156 Nervous system
04725 Cholinergic synapse
100512044 (SLC5A7)
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
100512044 (SLC5A7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssc02000
]
100512044 (SLC5A7)
Transporters [BR:
ssc02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
100512044 (SLC5A7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSF
Alpha_GJ
Motif
Other DBs
NCBI-GeneID:
100512044
NCBI-ProteinID:
XP_013851350
Ensembl:
ENSSSCG00000008140
UniProt:
A0A4X1W1N8
F1SU25
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Position
3:complement(47994116..48020744)
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AA seq
579 aa
AA seq
DB search
MAFQVEGLIAIVVFYLLILLVGIWAAWRTKNSGSAEERSEAIIVGGRDIGLLVGGFTMTA
TWVGGGYINGTAEAVYVPDYGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQ
IYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIINTDVHASIIVSALIATLYTLVGG
LYSVAYTDVVQLFCIFVGLWISVPFALSNSAVTDIGFTALHTKYQKPWLGTIESFEVYTW
LDSFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCMVMALPPILIGAIGASTDW
NQTTYKPDTPKDNQQADMILPIVLKYLCPMYISYFGLGAVSAAVMSSADSSILSASSMFA
RNIYQLSFRQNASDREIVWVMRITVFVFGASATAMALLTKTVYGLWYLSSDLVYIIIFPQ
LLCVLFIKGTNTYGAVAGYIAGLFLRVTGGEPYLNLQPLIFYPGYYVEKNGIYNQRFPFK
TLAMLTSFLSNICISYLAKYLFESGTLPPKLDMFDAVVARHSEENMDKTILVKNENIKLD
ELAPVKPRQSLTLSSTFTNQEAFLNIDSSPEGSGTEDNL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggctttccaggtggaagggctgatagcgatcgtggtgttctaccttctcatactactg
gttggaatatgggctgcctggagaaccaaaaacagtggcagcgcggaggagcgcagcgaa
gccatcatcgtgggcggccgagacatcgggctgctggtgggtggattcaccatgacagcc
acctgggtcggaggaggttacatcaacgggacagccgaagcagtgtatgtaccagactat
ggtctggcttgggctcaggcaccaattggatattctcttagtctgattttaggtggtctg
ttctttgcgaaacccatgcgttctaaggggtacgtgaccatgttagacccatttcagcaa
atctacgggaagcgcatgggcgggctcctgttcatccctgcactgatgggggagatgttc
tgggctgcggccatcttctctgccttaggagccaccatcagtgtgatcattaacacggat
gtgcacgcgtccatcatcgtctccgcactgatcgccactctgtacacgctggtgggcggg
ctctactccgtggcctacacggatgtggtccagctcttctgcatcttcgtgggactgtgg
atcagtgtcccctttgcgctctctaactctgcggtcaccgacatcgggttcacggcccta
cacaccaagtaccagaagccttggctggggaccattgagtcctttgaagtctacacgtgg
cttgacagcttcctgttgttgatgctgggaggaatcccgtggcaagcctacttccagagg
gttttgtcttcatcctcagccacctatgcccaagtgctgtccttcctggcagctttcggg
tgcatggtgatggccctgccacccatactcattggagccattggagcatcaacagactgg
aatcagaccacctacaagcctgacacccccaaggacaaccaacaggcagacatgatcttg
ccgattgtcctgaagtacctctgtcccatgtacatttcttactttggtctcggtgccgtc
tctgctgccgtcatgtcatcagcggactcttccatcttgtcagcaagttctatgtttgct
agaaacatctaccagctctcattcagacaaaacgcttccgacagggagatcgtctgggtc
atgcggatcacagtattcgtgtttggtgcgtctgcaacagccatggccttgctgaccaag
accgtgtatgggctctggtacctcagctccgacctcgtctacatcattatcttcccgcag
ctgctctgtgtgctcttcatcaaggggaccaacacgtacggggccgtggcagggtacatt
gctggccttttcctgagggtaaccggtggagagccatacctgaacctgcagcccttgatc
ttttaccctggttattacgttgaaaaaaatggtatatataatcagagattcccatttaaa
acccttgccatgctcacctccttcttatccaacatttgcatctcttatctagccaaatat
ctatttgaaagtggaaccttgccaccaaaattagatatgtttgatgctgttgttgcaaga
cacagtgaagaaaacatggataagaccattctggtcaaaaatgaaaacattaaattagac
gaacttgcacctgtgaagcctcggcagagcctaactctgagctcgactttcaccaatcag
gaggccttcctcaacatagattccagcccagaaggttctgggacagaagacaatttgtaa
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