KEGG   Sus scrofa (pig): 100512087
Entry
100512087         CDS       T01009                                 
Symbol
RTN3
Name
(RefSeq) LOW QUALITY PROTEIN: reticulon-3
  KO
K20723  reticulon-3
Organism
ssc  Sus scrofa (pig)
Pathway
ssc05010  Alzheimer disease
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100512087 (RTN3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100512087 (RTN3)
   03036 Chromosome and associated proteins [BR:ssc03036]
    100512087 (RTN3)
Membrane trafficking [BR:ssc04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    100512087 (RTN3)
 Autophagy
  ER-phagy
   ER-phagy recepters
    100512087 (RTN3)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100512087 (RTN3)
SSDB
Motif
Pfam: Reticulon
Other DBs
NCBI-GeneID: 100512087
NCBI-ProteinID: XP_020938562
Ensembl: ENSSSCG00000013052
LinkDB
Position
2:complement(8291750..8354920)
AA seq 942 aa
MAELSAATQSPSVSSSSGAESSAPGGGGGSPGACPALGAKSCGSSCADSFVSSSSSQPVS
IFSTSQASFPARPASLSKEVGQKEQQINKDEEPKNPNEVPSCNDKTSLDADDKFTLPTSQ
KLPTEQSEAEGICTYSLSPSEVSGGGIIEKDSPESPFEVIIDKAAFDKEFKDTYKESAND
FGSWAVHTDRESHADISESKDKVFPLRNKEAGHYPASGLLTRQFSHTTAXLEEVSRCVND
MHNFTNEILTWDLVSQVKQQSAKSDYITKTTGLDTSEYNSEIPVANLKTNTHQKIPVCSI
DGSTAVPKPTGDWAEMSLPQENAMPDSVSMQEINTKGVQGSVQKRDDTVAELPGSPFEKR
VSLGSGVATVKVVLPDGHLKNDEMNWQTSVLGEMTEADSSGESDDTVIEDITADTSFESN
KIQTEKPVPIPSAVVKTDEREIKETLNCNREDKISGNFEGSVSDSEPQVQPDILQRRPXS
EAPCSQVPDRNFISEEVKQSHLMSVVAPAMPVAAENPKLPSAESPNVFNDKTEFSLNVIA
SASLESLHEKSVKDIDDSSPEDLIAAFSETREKGILGKGEGSTFEAVSEKTEDLKTNSAD
VLHESESGGSEIKNVKSKYSEQSKETDRSELLDILSTQLTPAASLDLEQEQLTIRALKEL
SERKIEKFASAQDKVDSPEEILKPTLTFAPESSWPQRSCDILQHKDVKTGSDLGISKKPT
LNKETASVDITSSLSKTELVNKHVLARLLTDFSVHDLIFWRDVKKTGFVFGTTLIMLLSL
AAFSVISVVSYLILALLSVTISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHNY
VNAAMVHINKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLIFSV
PVVYEKYKTQIDHYVGIARDQTKSIVEKIQAKVPGIAKKKAE
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggcggagctgtcggcggccactcagtccccgtccgtctcgtcgtcctccggggccgag
tcctctgcgcccggtggcggcggtgggagcccgggagcctgccccgccctgggggcgaag
agctgcggctcctcctgtgcggattcctttgtttcttcctcttcctctcagcctgtatct
atattttcgacttcacaagccagtttcccagctcgtcctgcttctctctcaaaggaagtt
ggtcaaaaggaacagcaaataaataaagatgaggagcccaagaacccaaatgaggtacca
agttgcaatgataaaacttccttggatgctgatgacaagttcactttgccaacatcccag
aaactacccacggaacagtctgaagcagaaggcatttgtacatattctttatccccctct
gaagtttcagggggtggtattattgaaaaggattccccggaatcaccatttgaagtaatt
attgacaaagcagcatttgacaaagaatttaaagacacatataaggaaagtgcaaatgac
tttggtagctgggcagtgcatactgatagagaatcacatgcagacatttcagagtccaag
gacaaagtatttccactgagaaataaggaagcggggcattacccagcctctgggttgctc
actagacagttttcacacacaactgcangcttggaggaggtgtctagatgtgtgaatgat
atgcataactttactaatgaaatactgacttgggatttggtttcccaagtgaaacagcag
agtgctaagtctgactacatcacaaaaactacaggactagacacgagtgaatataattca
gaaattccggttgcaaatcttaaaaccaacactcatcagaaaattcctgtatgttctatt
gatgggagcactgctgtccctaaaccaacaggcgattgggcagaaatgtctctcccacag
gaaaatgctatgccagactctgtttccatgcaggaaatcaataccaaaggtgtgcaaggc
agtgtacagaaaagagatgacacagttgcagagttacctggatctccatttgagaaacgt
gtctctctgggttctggagtggccacagtgaaagtggttttacctgatggccacttgaaa
aatgatgaaatgaattggcagacctctgtgttgggggaaatgacagaggctgatagttct
ggtgagtctgatgacacagtaatagaggacatcacagctgatacttcatttgaaagcaac
aaaattcagactgaaaaacctgttcccattccaagtgctgttgtaaaaacagatgaaaga
gaaatcaaagagactcttaattgtaatagggaagacaaaatatctggaaactttgaaggg
tcagtcagtgactctgagccacaagttcagcctgatattcttcaaaggagacctngcagt
gaggcaccatgttcacaagtacctgataggaattttatctcagaagaggtgaagcagtct
catcttatgagtgtagttgctcctgcaatgcctgttgcagctgagaacccaaaacttcct
tcagcagagtctccaaatgtttttaacgataagacagaattctcactaaatgtgatagcc
tctgcctctttggagtcattgcatgaaaaaagtgttaaagatatagatgattcttcccca
gaggacctgatagcagccttttcagaaaccagagagaaaggaatactaggtaaaggtgaa
ggaagtacctttgaagcagtatcagagaaaactgaggacttaaaaacaaattctgcagat
gttttgcatgaaagtgagtcaggtggttctgaaattaaaaacgtaaaaagcaaatacagt
gaacaaagcaaagaaacagataggagtgaacttctggatattctctctacccagcttact
ccagcagcctctctggacttagaacaggaacagctcacaatcagagcccttaaagaattg
agtgaaaggaagattgagaagttcgcttctgcacaggataaagtagactctcctgaagaa
atactcaagccgactttaacatttgctccagaatcatcttggccacagagatcatgtgat
atcctacaacacaaagatgtcaagactggatctgatcttggaatttccaagaagcccact
cttaacaaagaaactgctagtgtagatattacttccagccttagcaagaccgaactggta
aacaagcatgtcttagcaagacttctgacagacttctcagtgcacgacctgattttctgg
cgagatgtgaagaagactgggtttgtctttggcaccacactgatcatgctgctttccctg
gcagctttcagtgtcatcagtgtggtttcttacctcatccttgctcttctgtctgtcacc
atcagcttcagagtctacaagtctgtcatccaagctgtacagaagtcagaagaaggccat
ccattcaaagcctacctggatgtagacatcactctgtcctcagaagctttccataattat
gtgaatgctgccatggtgcacatcaacaaggccctgaaactcatcattcgtctcttcctg
gtggaagatctagttgactccttgaagctggctgtcttcatgtggctgatgacctatgtt
ggtgccgttttcaatgggatcacccttctgattcttgccgaactgctcattttcagtgtt
ccagtcgtctatgagaagtacaagacccagattgatcactatgttggcatcgctcgggat
cagaccaagtccattgttgaaaagatccaagcaaaagtccctggaatcgcaaagaaaaag
gcagaataa

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