Sus scrofa (pig): 100512087
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Entry
100512087 CDS
T01009
Symbol
RTN3
Name
(RefSeq) LOW QUALITY PROTEIN: reticulon-3
KO
K20723
reticulon-3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100512087 (RTN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100512087 (RTN3)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100512087 (RTN3)
Membrane trafficking [BR:
ssc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100512087 (RTN3)
Autophagy
ER-phagy
ER-phagy recepters
100512087 (RTN3)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100512087 (RTN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
100512087
NCBI-ProteinID:
XP_020938562
Ensembl:
ENSSSCG00000013052
LinkDB
All DBs
Position
2:complement(8291750..8354920)
Genome browser
AA seq
942 aa
AA seq
DB search
MAELSAATQSPSVSSSSGAESSAPGGGGGSPGACPALGAKSCGSSCADSFVSSSSSQPVS
IFSTSQASFPARPASLSKEVGQKEQQINKDEEPKNPNEVPSCNDKTSLDADDKFTLPTSQ
KLPTEQSEAEGICTYSLSPSEVSGGGIIEKDSPESPFEVIIDKAAFDKEFKDTYKESAND
FGSWAVHTDRESHADISESKDKVFPLRNKEAGHYPASGLLTRQFSHTTAXLEEVSRCVND
MHNFTNEILTWDLVSQVKQQSAKSDYITKTTGLDTSEYNSEIPVANLKTNTHQKIPVCSI
DGSTAVPKPTGDWAEMSLPQENAMPDSVSMQEINTKGVQGSVQKRDDTVAELPGSPFEKR
VSLGSGVATVKVVLPDGHLKNDEMNWQTSVLGEMTEADSSGESDDTVIEDITADTSFESN
KIQTEKPVPIPSAVVKTDEREIKETLNCNREDKISGNFEGSVSDSEPQVQPDILQRRPXS
EAPCSQVPDRNFISEEVKQSHLMSVVAPAMPVAAENPKLPSAESPNVFNDKTEFSLNVIA
SASLESLHEKSVKDIDDSSPEDLIAAFSETREKGILGKGEGSTFEAVSEKTEDLKTNSAD
VLHESESGGSEIKNVKSKYSEQSKETDRSELLDILSTQLTPAASLDLEQEQLTIRALKEL
SERKIEKFASAQDKVDSPEEILKPTLTFAPESSWPQRSCDILQHKDVKTGSDLGISKKPT
LNKETASVDITSSLSKTELVNKHVLARLLTDFSVHDLIFWRDVKKTGFVFGTTLIMLLSL
AAFSVISVVSYLILALLSVTISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHNY
VNAAMVHINKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLIFSV
PVVYEKYKTQIDHYVGIARDQTKSIVEKIQAKVPGIAKKKAE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgtcggcggccactcagtccccgtccgtctcgtcgtcctccggggccgag
tcctctgcgcccggtggcggcggtgggagcccgggagcctgccccgccctgggggcgaag
agctgcggctcctcctgtgcggattcctttgtttcttcctcttcctctcagcctgtatct
atattttcgacttcacaagccagtttcccagctcgtcctgcttctctctcaaaggaagtt
ggtcaaaaggaacagcaaataaataaagatgaggagcccaagaacccaaatgaggtacca
agttgcaatgataaaacttccttggatgctgatgacaagttcactttgccaacatcccag
aaactacccacggaacagtctgaagcagaaggcatttgtacatattctttatccccctct
gaagtttcagggggtggtattattgaaaaggattccccggaatcaccatttgaagtaatt
attgacaaagcagcatttgacaaagaatttaaagacacatataaggaaagtgcaaatgac
tttggtagctgggcagtgcatactgatagagaatcacatgcagacatttcagagtccaag
gacaaagtatttccactgagaaataaggaagcggggcattacccagcctctgggttgctc
actagacagttttcacacacaactgcangcttggaggaggtgtctagatgtgtgaatgat
atgcataactttactaatgaaatactgacttgggatttggtttcccaagtgaaacagcag
agtgctaagtctgactacatcacaaaaactacaggactagacacgagtgaatataattca
gaaattccggttgcaaatcttaaaaccaacactcatcagaaaattcctgtatgttctatt
gatgggagcactgctgtccctaaaccaacaggcgattgggcagaaatgtctctcccacag
gaaaatgctatgccagactctgtttccatgcaggaaatcaataccaaaggtgtgcaaggc
agtgtacagaaaagagatgacacagttgcagagttacctggatctccatttgagaaacgt
gtctctctgggttctggagtggccacagtgaaagtggttttacctgatggccacttgaaa
aatgatgaaatgaattggcagacctctgtgttgggggaaatgacagaggctgatagttct
ggtgagtctgatgacacagtaatagaggacatcacagctgatacttcatttgaaagcaac
aaaattcagactgaaaaacctgttcccattccaagtgctgttgtaaaaacagatgaaaga
gaaatcaaagagactcttaattgtaatagggaagacaaaatatctggaaactttgaaggg
tcagtcagtgactctgagccacaagttcagcctgatattcttcaaaggagacctngcagt
gaggcaccatgttcacaagtacctgataggaattttatctcagaagaggtgaagcagtct
catcttatgagtgtagttgctcctgcaatgcctgttgcagctgagaacccaaaacttcct
tcagcagagtctccaaatgtttttaacgataagacagaattctcactaaatgtgatagcc
tctgcctctttggagtcattgcatgaaaaaagtgttaaagatatagatgattcttcccca
gaggacctgatagcagccttttcagaaaccagagagaaaggaatactaggtaaaggtgaa
ggaagtacctttgaagcagtatcagagaaaactgaggacttaaaaacaaattctgcagat
gttttgcatgaaagtgagtcaggtggttctgaaattaaaaacgtaaaaagcaaatacagt
gaacaaagcaaagaaacagataggagtgaacttctggatattctctctacccagcttact
ccagcagcctctctggacttagaacaggaacagctcacaatcagagcccttaaagaattg
agtgaaaggaagattgagaagttcgcttctgcacaggataaagtagactctcctgaagaa
atactcaagccgactttaacatttgctccagaatcatcttggccacagagatcatgtgat
atcctacaacacaaagatgtcaagactggatctgatcttggaatttccaagaagcccact
cttaacaaagaaactgctagtgtagatattacttccagccttagcaagaccgaactggta
aacaagcatgtcttagcaagacttctgacagacttctcagtgcacgacctgattttctgg
cgagatgtgaagaagactgggtttgtctttggcaccacactgatcatgctgctttccctg
gcagctttcagtgtcatcagtgtggtttcttacctcatccttgctcttctgtctgtcacc
atcagcttcagagtctacaagtctgtcatccaagctgtacagaagtcagaagaaggccat
ccattcaaagcctacctggatgtagacatcactctgtcctcagaagctttccataattat
gtgaatgctgccatggtgcacatcaacaaggccctgaaactcatcattcgtctcttcctg
gtggaagatctagttgactccttgaagctggctgtcttcatgtggctgatgacctatgtt
ggtgccgttttcaatgggatcacccttctgattcttgccgaactgctcattttcagtgtt
ccagtcgtctatgagaagtacaagacccagattgatcactatgttggcatcgctcgggat
cagaccaagtccattgttgaaaagatccaagcaaaagtccctggaatcgcaaagaaaaag
gcagaataa
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