Sus scrofa (pig): 100512139
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Entry
100512139 CDS
T01009
Symbol
WRN
Name
(RefSeq) Werner syndrome ATP-dependent helicase isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssc03032
]
100512139 (WRN)
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100512139 (WRN)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100512139 (WRN)
DNA replication proteins [BR:
ssc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100512139 (WRN)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
100512139 (WRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Sos7
SAM_GIDA_C
Motif
Other DBs
NCBI-GeneID:
100512139
NCBI-ProteinID:
XP_020931441
Ensembl:
ENSSSCG00000015840
LinkDB
All DBs
Position
15:complement(53966968..54094855)
Genome browser
AA seq
1453 aa
AA seq
DB search
MNEDTLETTQQQRKLPKWMAMQNKGYAIEKRKASIQKSVLEDDLPFLEFTGSIVYSYEAS
DCSFLSEDISLSLSSGDVVGFDMEWPPVYNKGKLGRIALIQLCVSESKCYLFHISSMSVF
PQGLKMLLENEAIKKAGVGIKGDQSKLLRDFDIKLKSFVELTDVANEKLKCAETWSLNGL
VKHLFSKQLLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGFIIYQKLENLGDAIQILAIN
KDEEVLPSDVKKQLTSISEEMMDLAKHLPDTFGKLESPQRVSMLLKDISENLCSLRKMIF
GSTGNELSPISSFHLLPLQEPTASKVQQKQITIYDFFTKVRDEAWHRTLDNLIKHGGENV
LGNEANQEDGFETGLEEDNELKENTERVCLMSLDITEYELQLLEQEAKEKNLSNITSSSP
EHLSSKDNEEDISYVIESDEDLEMEMLKSLENLNSGTVNPNHTKCREMEGNLGLPLEEDE
DENEAVVEEEEEEDYLLPEPTAKQINCLKTYFGHSSFKPVQWKVIHSILEERRDNVVVMA
TGYGKSLCFQYPPVSVGGIGLVISPLISLMEDQVLQLEMSNIPACFLGSAQSKNVLEDIK
LGKYRIVYLTPEFCSGNLDLLQHLEANIGITVIAVDEAHCISEWGHDFRNSFRTLGSLKS
ALPLVPIVALTATGTSSIREDIVRCLKLKDPQITCTGFDRPNLYLEVGRKTGDILQDLKQ
FLVQKTSSAWEFEGPTIIYCPSRKMTEQVTAELKKLKLACETYHAGLSIHLRKQVHHKFM
RDEIQCVIATIAFGMGINKADIRKVIHYGAPKEIESYYQEIGRAGRDGLQSSCHILWAPA
DINLNRHLLSEICNENFRLYKLKMMAKMEKYLHSSRCRRQIILSHFEDKQLRKASLGIMG
TEKCCDNCRSRLDHCFSTEDSEDMSQDFGPQAFQLLSAVTILGEKFGIGLPILFLRGSSS
QRLEDKYRSHSFFGTGKDHTESWWKAFSRQLVTEGFLVDVPGQSKFVKICTLTKKGRNWL
AKAKTESPQRLILQANEELCPRKFSLPSSNAVSSGTEQYSSNQVPVESTSEKKQSNLKKT
YSYKASDKISSGSNTPKKSIMVPSPRKYYMSSEPVISAQEQETQTELYGKLVEARQKHAN
KMDVPPAILATNKILVDMAKMRPTTVENVKRIDGVSEGKAMMLAPLLEVIKHFCQINSVQ
TNVFSSAKPQEEQKKSLVMKDKASLLSQSEAITYSLFQEKKMCLKSIAEERILPLTAVGM
HLSQAVKAGYPLDMDRAGLTPEVQKIIADVIRNPHINSDINKIKLIRKYVPESIDTYLIH
MAIEILEKDCDNRIQCQSACDSSKKRYFSNSEESCSDAKRSKEEVSINTKVDRKYPSDFS
LEDESHRNSLKLTSWNQPFSDPEIEDLFTDSHSQTSSKTSERKLPGWFAKENEILPDTSK
KSAAKTKKKGLFC
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagacacattggaaacaactcaacagcagcggaaacttcctaaatggatggcc
atgcagaataagggatatgccatagagaaaagaaaggcatctattcagaagagtgttttg
gaagatgacctccccttcttagaatttactggatccattgtgtacagttatgaagctagt
gattgttccttcttatcagaagatattagcttgagtctatctagtggagatgtggtagga
tttgatatggaatggccaccagtatacaataaaggaaaactgggcagaattgcgctaatt
cagttgtgtgtgtcagagagcaaatgttatctgtttcatatttcttctatgtcagttttc
ccgcagggcttaaaaatgttgcttgaaaatgaagcaattaaaaaggcaggtgtaggaatc
aaaggagatcagtcgaaacttctacgtgactttgacatcaaattgaagagttttgtggag
ctgacagatgttgccaatgaaaagctgaaatgtgcagagacctggagcctcaatggtttg
gttaaacacctcttcagtaaacagcttctaaaagacaagtctatccgctgtagcaattgg
agtaattttcccctcactgaggaccagaaattatacgcagctactgatgcttatgctggt
ttcatcatttatcaaaaattagaaaatttgggtgatgccatacagatactagccataaat
aaagatgaggaagtactgcctagtgatgtaaagaaacaattgacttcaatctctgaagag
atgatggatctggctaagcatcttcctgacacttttggaaagttggaaagtccacagagg
gtttctatgctattgaaggatatttcagaaaatctgtgttcattgaggaagatgatattt
ggttctactggaaatgaactgagtcccatcagtagttttcacttattaccattgcaagag
ccaactgctagtaaagtacaacagaaacaaattacaatatatgatttttttactaaagtt
agagatgaggcatggcacagaacacttgataatttaattaaacatggtggagaaaatgtc
cttggaaatgaagctaatcaagaagatggatttgaaactggactagaagaagacaatgag
ctgaaagagaacacagaaagagtttgtttgatgtcattagatattacggaatatgaactg
caacttttggaacaagaggctaaggaaaaaaatcttagtaatattacttccagctctcct
gagcatttgtcttccaaggacaacgaagaggatatatcttatgtaattgagagtgatgaa
gatttagaaatggagatgcttaagtctttagaaaatctaaatagtggcacagtaaatcca
aatcatacaaaatgcagagaaatggaaggaaatctgggtcttcctttggaagaagatgaa
gatgagaatgaagctgttgtagaggaagaagaagaagaagactacttgttaccagaacct
accgcaaagcaaattaattgcctcaagacatactttggccattccagttttaaaccggtt
cagtggaaagtgattcattccatattggaagaaagaagagataatgttgttgtcatggca
actgggtatggaaagagtttgtgcttccagtacccacctgtctctgtaggtgggattggc
cttgtcatctctccccttatttctttgatggaagaccaagtgctccagcttgaaatgtcc
aacattccagcttgttttcttggatcagcacagtcaaaaaatgttctagaggatattaaa
ttaggaaaataccgcattgtatacttaactccagaattctgttcaggtaacttggaccta
ctccagcatcttgaagctaatattggtatcacagttattgctgtggatgaggctcactgt
atttctgagtggggacatgattttagaaattcattcagaactttgggctccctaaagtca
gcactcccgttggttccaattgtggcactgactgctactggaacttcttcaatccgagaa
gacattgtacgttgcttaaaactgaaggatcctcagattacctgtactggttttgatcga
ccaaacttgtatttagaagttggacgaaaaacaggagacatccttcaggatctgaagcag
tttcttgtccagaagacaagttctgcctgggaatttgaaggtccaactatcatctattgt
ccttccagaaaaatgacagaacaagttacagctgaacttaagaaactgaagttagcctgt
gaaacataccatgcaggactgagtattcacttaaggaagcaagttcatcataagtttatg
agagatgaaattcagtgtgtcatagctaccatagcttttggaatgggcattaataaagct
gacattcgtaaagtcattcattatggtgctcctaaggagatagaatcatattaccaggag
attggtagagctggccgtgatggacttcaaagttcttgtcacattctctgggctccagca
gacattaacctaaataggcacctccttagtgagatatgcaatgaaaactttcgattatac
aaattaaagatgatggcgaagatggaaaaatatcttcattccagcaggtgtagacgacaa
atcatcttgtctcattttgaagacaaacagctacgaaaggcctccttgggaattatggga
actgaaaaatgctgtgataattgcaggtccagattggatcactgcttttccactgaagat
tcagaggatatgtcacaggactttggtccacaagcattccagctcttatctgctgtgacc
atcttaggagaaaagtttggaattgggcttccgattttatttctccggggatctagttcc
cagcgtcttgaagataaataccgcagtcacagtttctttggcactggcaaggatcacaca
gagagctggtggaaggctttttcccgccagctcgtaactgaggggttcttggtagatgtt
cctgggcaaagcaaatttgtaaagatttgcacccttacaaaaaagggtagaaattggctt
gctaaagccaaaacagaatctcctcagagactcatccttcaagctaatgaagaattgtgt
ccgaggaagttttctctaccaagttctaatgctgtatcttcgggcactgaacaatattcc
tctaatcaagtaccagttgaatcaacttcagagaagaagcagtctaacttgaagaagaca
tattcttacaaagcatctgataaaatctcttctgggagtaatactcctaaaaaaagtatc
atggtgccatcaccaagaaaatactatatgtcatcagaacctgttatttcagctcaagag
caggagactcagactgagttatatggcaaattggtggaagccagacagaaacatgccaat
aaaatggatgttcctccggctattctggcaacaaataagatactggtggatatggccaaa
atgagacctactacagttgaaaatgtgaagaggattgatggtgtttctgaaggcaaagct
atgatgttggcccctcttttggaagtcatcaaacatttctgtcaaataaatagtgttcag
acaaatgtcttttcaagtgcaaaacctcaagaagaacagaagaaaagtctggtgatgaaa
gataaagcaagtttactttcacagtctgaggccatcacatattctttattccaagaaaag
aaaatgtgtttgaagagtatagctgaggaaaggattctgcctctcacagccgttggcatg
cacttgtcccaagcggtgaaagctggctacccactcgacatggatcgagcaggcctgact
ccagaggttcagaagatcattgctgatgttatccgaaaccctcatatcaactcagatata
aataaaatcaaactaatcagaaagtatgttcctgaaagcattgacacataccttatccac
atggcaattgagatcctggaaaaagattgtgacaatagaatacaatgccagtctgcatgt
gattccagcaaaaagagatatttctccaactctgaagagagctgttcagatgctaagaga
agcaaggaagaagtaagcataaataccaaggttgatagaaaatatccttctgatttttca
ctggaagatgagagccacaggaattcactgaaactaacttcttggaatcagccatttagc
gatccagaaatagaagacttatttacagattctcattcacagacttcatccaaaacctca
gagagaaaattacctgggtggtttgccaaagaaaatgagatcttacctgataccagcaag
aaatcagcggccaaaacaaagaagaagggtcttttttgttaa
DBGET
integrated database retrieval system
