Sus scrofa (pig): 100512190
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Entry
100512190 CDS
T01009
Symbol
FTSJ3
Name
(RefSeq) pre-rRNA processing protein FTSJ3
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100512190 (FTSJ3)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100512190 (FTSJ3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Phage_integr_3
M16C_assoc
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
100512190
NCBI-ProteinID:
XP_013836304
Ensembl:
ENSSSCG00000017288
UniProt:
A0A8D1NTD6
A0A480PST2
A0A8D1CK13
F1RSJ8
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All DBs
Position
12:15105642..15115025
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AA seq
836 aa
AA seq
DB search
MGKKGKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQ
VAAKFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAP
NVGASWVHDAYSQAHLTLMALRLACDFLGRGGCFITKVFRSRDYQPLLWIFQQLFRRVQA
TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEIQAKTVTELVTKKKPKAEG
YAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIAIDDEELARHPATTEDVRACCQDIRVL
GRKELRSLLNWRTKLRRHVAKKLKEQAKAMDISLSSGEEEEGEEEEQAARASQQPSKEEE
EEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKMDLPGVSIADEGETGMFSL
RTIRGHQLLEEVTQGDMSAADTFLSDLPSDDIYISDAEEDDDDSASLDSDLDPEDLAGVR
EPQGLKDQKRVRLAEANDEKEEEGENPLLVPLEEKAVLQEEQASLWFSKDGFSGIEDDAD
EALEISQAQLLYESRRKGQQPLPAPSSVKTERKPPPCQGEAPEGAGAPSGTEAATGPGGE
ARDSSSDSDSSSSEDEDTWKPRSQKRRRGPEAGDDDGFEIVPIEDPARHRILDPEGLALG
AIIASSKKAKRDLIDDSFSRYTFNEDEGELPEWFVQEEKQHRIRQLPLDKKEVEYYRKRW
REINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGL
GKEKRQVTYVVAKKGVGRKVRRPAGVRGHFKVVDSRMKKDQRAQQRKEQKKKHKRK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaagggcaaagtagggaagagccggcgggacaagttctatcacctggcgaaa
gagaccggttaccgttcccgctctgctttcaagttgatccagctgaatcgccgctttcaa
tttctgcagaaagcccgagccttgctagacctgtgcgctgcaccaggtggatggctgcag
gtggctgccaagtttatgcctgtctccagccttattgtgggtgtggacttggttccaatc
aagcctcttcccaatgtggtgactctccaggaggatatcacaacagaacgttgtaggcag
gccttgaggaaggagctgaagacctggaaagttgatgttgtgcttaatgatggggccccc
aacgttggggccagctgggtccatgatgcttattcacaagcccatttgaccctgatggct
ctgcgtttggcttgcgattttctgggtcgcggtggctgcttcatcacgaaggttttccgt
tctcgtgattatcagcccttactgtggatcttccagcagctcttccgccgtgtccaggcc
actaagccccaagcgtctcgtcatgaatctgcagagatttttgtggtctgccagggattc
ctggcgcctgacaaggttgacagtaaattctttgaccccaagtttgccttcaaggaggtt
gaaattcaggccaagactgttaccgagttggtgactaagaagaagccaaaggctgaaggc
tatgccgagggtgacctcactctctatcaccgaacctcagtcactgacttcctccgagct
gccaaccctgtcgactttctctccaaagccagcgaaattgcaatagatgatgaagagttg
gcacggcatccagccaccaccgaggatgtacgggcatgctgtcaggatatcagagtgctg
ggccgcaaggagcttagatccctactgaactggaggacgaagcttcggcgacatgtggcc
aagaagctgaaagaacaagcaaaggcaatggacatcagcctcagctcaggggaggaagag
gaaggggaggaggaggagcaggcggcccgggcctcgcagcagccctctaaggaggaggag
gaggaggagcagctcaaccggaccctggcagagatgaaggcccaggaggtggcggagtta
aagaggaagaaaaagaagctgctgcgcgagcagaggaagcagcgggagcgtgtggagctg
aagatggatcttcctggagtttccatcgccgatgagggggagactggcatgttctccctg
cgcaccatccggggtcaccagttgttagaggaggtgacgcaaggggacatgagtgctgca
gacacgtttctgtctgacctgccaagtgatgacatctacatatcagacgctgaggaggac
gacgacgacagtgcatctctggatagtgacctggatccagaggacctagcaggagtcaga
gaacctcaaggtctaaaggaccaaaagcgtgtacgacttgctgaagcaaatgatgagaaa
gaggaggagggagagaacccgctgctggtgccactcgaggaaaaggcggtactgcaggaa
gaacaagccagcctgtggttctcaaaggatggcttcagcgggatcgaggatgatgctgac
gaggccctggagatcagccaggcacagctgttgtacgagagccgtcgcaaggggcagcag
ccactgccagcaccttccagcgtgaagactgagagaaaaccacccccatgccagggtgag
gcccctgaaggggcaggggctccttcagggacagaggctgccacaggccctggcggggaa
gccagagatagcagctctgacagcgacagcagcagcagtgaggatgaagacacttggaaa
ccacgcagtcagaagcgaagacgggggcctgaggcaggggatgacgacgggtttgagatc
gtgcccattgaggacccagcgagacatcggatactggaccctgaaggcctggctctaggc
gccattattgcctcttccaaaaaagccaagagagacctcatagatgactccttcagccgg
tacacatttaatgaggatgagggggagcttccagagtggtttgtgcaggaggagaagcag
cacaggatacgacagctgcctcttgataagaaggaggtggagtattacaggaaacgctgg
cgggaaatcaacgcccgtcccatcaagaaagtggctgaggctaaggccagaaagaaacgg
aggatgctgaagaagctggagcagaccaagaagaaggcagaagctgtggtcaacacggtg
gacatctcagagcgggagaaagtggcacagcttcgaagtctctacaagaaggcagggctt
ggaaaggagaaacgccaggtcacctatgtcgtagccaaaaaaggtgtgggccgcaaagta
cgccgaccagctggagtcagaggtcacttcaaggtggtggactcgaggatgaagaaagac
caaagagcacagcaacggaaggagcagaagaaaaagcacaagcgcaagtga
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