Sus scrofa (pig): 100512260
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Entry
100512260 CDS
T01009
Symbol
GARS
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100512260 (GARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssc01007
]
100512260 (GARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssc03016
]
100512260 (GARS)
03029 Mitochondrial biogenesis [BR:
ssc03029
]
100512260 (GARS)
Enzymes [BR:
ssc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
100512260 (GARS)
Amino acid related enzymes [BR:
ssc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
100512260 (GARS)
Transfer RNA biogenesis [BR:
ssc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100512260 (GARS)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
100512260 (GARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
DUF5915
Motif
Other DBs
NCBI-GeneID:
100512260
NCBI-ProteinID:
XP_003134854
Ensembl:
ENSSSCG00000016677
UniProt:
A0A4X1T5Y1
LinkDB
All DBs
Position
18:complement(42311711..42352201)
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AA seq
742 aa
AA seq
DB search
MPSLRPALLRAARAALLLSPPPRLPAQPPLLPCRHISKPARAPISSPAASAAASRSSMDG
VGTEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDD
VVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILE
IDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSAEKKS
EMESVLAQLENYGQQELGDLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLR
PETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDP
SEKDHPKFQNVADLHLHLYSAKAQVSGQSARKMRLGDAVEQGVINNSVLGYFIGRIYLYL
VKVGVSPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATK
VPLVAEKPLKEPKTVNVVQFEPNKGAIGKAYKKDAKLVMEYLAICDECYITEMEKLLNEK
GEFTVETEGKTFQLTKDMVNVKRFQKTLHVEEVVPSVIEPSFGLGRIMYTVFEHTFHVRE
GDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRR
YARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPSVVRDLANGSITWA
DVEARYPLFEGQETGKKETIEE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgccctctctgcgcccggcgctgctaagagccgcccgcgccgcgctgctgctgtcgcca
ccgccccggctcccagcccagccgccgctcctgccctgccggcacatcagcaagcccgcc
cgcgccccgatctcgtcccccgccgcctccgccgccgcctcccggagcagcatggacggc
gtcgggactgaggaggtgctggcacctctcaggctagcggtgcgccagcagggagacctt
gtgcgaaaactgaaagaagataaagcaccccaagtagatgtagacaaagcagtcgctgag
ctcaaagcccggaagagggttctggaagcaaaggagctagcgttacagcccaaagatgat
gtggtagacagagcaaaaatggaagataccctgaagaggaggtttttctacgatcaagct
tttgctatttatggaggtgttagtggcctctatgattttgggccagttggatgtgctttg
aagaacaatattattcagacctggaggcagcactttatccaagaggaacagatcctggag
attgattgcaccatgctcacccccgagccagttttaaagacctctggccacgtagacaag
tttgctgatttcatggtgaaggatgtcaaaaatggagagtgttttcgggctgaccatctg
ttgaaagctcatttacagaaattgatgtctgacaagaagtgctctgctgagaagaaatca
gagatggaaagtgtcttggcccagcttgagaactatggacagcaagaacttggagacctt
tttgtgaactataacgtaaaatcccctattactggaaatgatctgtccccaccagtgtct
tttaacttaatgttcaagaccttcattgggcctggaggaaacatgcctgggtacttgaga
ccagagactgcgcaggggattttcctgaatttcaaacgacttttggaattcaaccaagga
aagttgccttttgctgctgcccagattggaaattctttccgaaatgagatctcccctcga
tctggactgatcagagtcagagagttcacaatggcagaaattgagcactttgtcgatccc
agtgagaaagaccatcccaagttccagaatgtggccgacctgcaccttcatttgtattcg
gcgaaagcccaggtcagcggacagtctgctcggaaaatgcgcctaggagatgctgtggaa
cagggtgtgatcaacaactcagtattaggctatttcatcggccgcatctacctctacctc
gtgaaggttggcgtatctccagataagctccgcttccgacagcacatggagaatgagatg
gcccattatgcctgcgactgttgggatgctgagtccaaaacatcctatggctggatcgaa
attgtcggatgtgctgatcgttcctgttatgacctttcttgtcatgcaagagccaccaaa
gtccctcttgtagctgagaaacctctgaaagagcccaagacagtcaatgttgttcagttt
gaacccaataagggagcaattggtaaagcatataagaaggatgcaaagctggtgatggag
tacctggccatttgtgatgaatgttacattacagaaatggagaaactactgaatgaaaaa
ggggaatttaccgttgagactgaagggaaaacatttcaattaacaaaagacatggtcaat
gtgaagagattccagaaaacactacatgttgaagaagttgtcccgagtgtcatcgagccc
tcctttggcctgggcaggatcatgtacacggtatttgaacatacattccacgtccgcgag
ggagatgaacagagaacgttcttcagtttccctgccgtcgtagctccattcaaatgttcc
gtccttccactgagccagaaccaggagttcatgccatttgtcaaggaattatcggaagcc
ttgaccaggcacggtgtgtctcacaaagtagacgattcctctgggtctatcggaagacgc
tatgccaggacggatgagatcggcgtggcttttggcatcaccattgacttcgatacagtg
aacaagacccctcacacggcaaccctgcgggaccgagactccatgcggcagataagagca
gaggtctccgaactgcccagcgtggtccgcgacctggccaatggcagcatcacatgggcc
gatgtagaggccagatatcctctctttgaaggtcaagaaactgggaaaaaagagacaatc
gaagaatga
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