Sus scrofa (pig): 100512314
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Entry
100512314 CDS
T01009
Symbol
CNTN6
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-6
KO
K06761
contactin 3/4/5/6
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100512314 (CNTN6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssc00537
]
100512314 (CNTN6)
Cell adhesion molecules [BR:
ssc04515
]
Immunoglobulin superfamily
Contactins
100512314 (CNTN6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssc00537
]
Others
100512314 (CNTN6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Sp38
Pur_ac_phosph_N
V-set_CD47
C2-set_3
Tissue_fac
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
100512314
NCBI-ProteinID:
XP_020924925
LinkDB
All DBs
Position
13:57754233..58014830
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AA seq
1029 aa
AA seq
DB search
MRLLWKLVILLPLINTCSGDGHLSHPIFTQEPQDVIFPLDLSKSEIILNCAANGYPSPHY
RWKQNGTDIDFTMSYHYRLDGGNLAISSPRTDQDIGTYQCLATNPLGTILSRKAKLQFAY
IEDFETKTRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQETGN
LYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAA
KDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAG
NLRGRNLAKGQLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPNPWYTWLKNGERLNP
EERIQIENGTLIITMLNVSDSGIYQCAAENKYQIVYANAELRVLASAPDFSKNPVKKNSV
VQVGGDIAIECKPNAFPRATISWKRGMENLRQSKRVFLMEDGSLKIYNVTRSDAGLYTCV
ATNQFGVAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGD
VIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGP
PEDVRVEHISSTTSQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTVPEILNGLTYNA
TVVGLNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPXVAPTNINGGGGSRSELVIT
WESIPEELQNGEEFGYIIMLRPVGSTTWTKARVPSVESSRFVYRNESIIPLSPFEVKVGV
YNNEGEGALSTASIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEI
LYWTDDSKESMIGKVRVSGNVTTKNITGLKANTVYFASVRAYNTAGTGPSSPPVNVTTKK
SPPSQPPANIAWKLTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSQTHILETNNTSA
ELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKMSSLSSRGVTVLQPGVYFLPVAIMIFF
YCFAIQSLI
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatggaaactggtaattctgctgccactcataaatacttgctcaggtgat
ggccatttgagccatcctatttttacccaggaaccacaggatgttatttttcctttggat
ttgtcaaaatctgaaatcatcctgaattgtgctgcaaatggttatccttcgccccattat
aggtggaagcaaaatggcacagatattgattttaccatgagttatcactacaggttggat
ggaggcaatttggcaatcagtagcccccgcacagaccaagatattggcacataccagtgc
ctggccaccaaccctctaggaacaattttaagtcggaaggcgaagctccaatttgcatat
attgaagactttgaaaccaaaacaagaagcacagtgtctgtccgagaaggtcaaggtgtg
gtgcttctctgtggtccaccaccacactttggagatttatcttatgcatggactttcaat
gataaccccttatatgtccaagaggacaagagacgatttgtatcacaagagacaggaaac
ttgtacattgccaaagtggaaccatcagatgttggcaactacacctgcttcataaccaat
aaggaagcccagaggagtgttcaaggaccgcccactccattagttcagcgcactgatggt
gtgatgggggaatatgaaccaaagattgaagtacgttttcctgaaactatacaagctgca
aaggattcatctgtaaaactggaatgctttgcccttggaaatccagtccctgatattagt
tggaggaggttggacggaagcccattgccagggaaagtcaagtacagcaaatcccaagct
atccttgaaatcccgaactttcaacaggaagatgaaggcttctatgaatgcattgcaggc
aaccttcgaggaagaaatcttgccaagggtcaactgattttctatgcccctccagaatgg
gaacaaaaaatacaaaatacatacctgtctatctatgacagcttgttttgggaatgcaaa
gctagtgggaagccaaacccttggtacacatggttaaaaaatggtgaacgcctcaatcca
gaggaaagaattcaaatagaaaatgggacacttatcataactatgctgaatgtatcagat
tctggtatctaccaatgtgcagcagaaaacaaatatcagatagtttatgcaaatgcagaa
ctgagagtattagcctctgctcctgatttctccaaaaatcccgttaaaaaaaattcagtt
gtgcaagttggtggggatattgcaatcgaatgcaaaccaaatgctttccctagagctact
atctcctggaaaagaggaatggaaaacctgagacaaagcaaaagagtgtttctcatggag
gatggcagtctcaagatatacaacgttaccaggtcagatgcgggattatatacttgcgta
gctacaaatcagtttggtgttgcgaagaacactggcagccttattgtaaaagagaggact
gttattacggttccaccttccaaaatggatgttacagttggcgagagtatagtgctacca
tgccaggtgtcccatgacccctccattgaagttgtatttgtatggtctttcaatggagat
gtcatagacttaaaaaaaggagtggctcattttgagaggattggaggagaatctgttggg
gatttgatgataaggaatattcagttaaatcattcaggaaaatatctatgcacagtaaaa
acaactctagaaagtttatctgcagtagctgatatcattgtgagaggtcccccaggtccc
ccagaggatgtaagagtggagcacatttccagtactacttctcaactaagctggaggcca
ggctcagataataatagccccattcaaatatttagtattcaggctcggacaccattttct
gtgggttggcaggctgtttcaacagtgccagaaattctcaatggtctgacatacaatgca
acagtggttggtttgaatccttgggtggaatatgaatttcgtgttgtggctgggaacagc
attgggattggagaaccaagtaaaccatcagaattattaaggaccaaagcatcagtacct
ngtgtggcaccaacaaacatcaatggaggtggaggaagtcggtctgaactcgtcattacg
tgggagtcaattccagaagaactccagaatggagaggaatttggatacatcatcatgcta
cggccagttggctcaacaacctggaccaaggcaagagtaccatctgtagaatcgtcaagg
tttgtttacagaaatgaaagcatcattcccctctctccctttgaagtcaaagtgggggtg
tataacaatgaaggagaaggagccctgagtactgcgtccattgtctactctggggaagat
gaaccccagctggccccaaggggaacttctgttcaaagtttttctgcttcagaaatggag
gtttcatggaatgctattgcctggaatagaaatactggaagagttctgggttatgagatc
ttatactggacagatgactccaaagaatccatgattggtaaagttagagtcagtggaaat
gtcacaaccaaaaacatcacaggactcaaagctaacactgtttactttgcttctgtgaga
gcttataacactgctgggacagggccttcaagtcccccagtcaatgttaccaccaaaaag
tctcctccaagtcaaccaccagctaacattgcctggaagctgacaaattctaaattatgt
ctaaactgggaacatgtaaaaaccatggaaaatgagtctgaagtattgggttacaagatt
ctataccggcaaaacagacagagtcaaactcatattttggaaacaaacaacacatctgct
gagcttctggttccatttgaagaggactacttgattgaaataagaacagttagtgatggt
ggggatggaagcagcagtgaggaaattaggattccaaaaatgtcaagtttgagttccaga
ggagttacagtcttacaacctggtgtctatttcctgccagttgccattatgatttttttt
tactgttttgctattcagtcacttatatga
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