Sus scrofa (pig): 100512454
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Entry
100512454 CDS
T01009
Symbol
PSMC3
Name
(RefSeq) 26S protease regulatory subunit 6A isoform X1
KO
K03065
26S proteasome regulatory subunit T5
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03050
Proteasome
ssc05010
Alzheimer disease
ssc05012
Parkinson disease
ssc05014
Amyotrophic lateral sclerosis
ssc05016
Huntington disease
ssc05017
Spinocerebellar ataxia
ssc05020
Prion disease
ssc05022
Pathways of neurodegeneration - multiple diseases
ssc05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100512454 (PSMC3)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100512454 (PSMC3)
09164 Neurodegenerative disease
05010 Alzheimer disease
100512454 (PSMC3)
05012 Parkinson disease
100512454 (PSMC3)
05014 Amyotrophic lateral sclerosis
100512454 (PSMC3)
05016 Huntington disease
100512454 (PSMC3)
05017 Spinocerebellar ataxia
100512454 (PSMC3)
05020 Prion disease
100512454 (PSMC3)
05022 Pathways of neurodegeneration - multiple diseases
100512454 (PSMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ssc03051
]
100512454 (PSMC3)
Proteasome [BR:
ssc03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
100512454 (PSMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
Mg_chelatase
AAA_33
PhoH
DUF5827
IstB_IS21
AAA_24
AAA_7
CCDC22_CC
Sigma54_activat
AAA_28
AAA_14
RNA_helicase
ATPase
AAA_11
Defensin
Motif
Other DBs
NCBI-GeneID:
100512454
NCBI-ProteinID:
XP_003122857
Ensembl:
ENSSSCG00000013239
UniProt:
A0A8W4FR49
LinkDB
All DBs
Position
2:15185482..15191189
Genome browser
AA seq
439 aa
AA seq
DB search
MNLLPQLESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVL
RVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGK
CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDER
PTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARAC
AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEK
AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEE
ARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY
MEGILEVQAKKKANLQYYA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgctgccgcagctcgagagtccagtgactcggcaggagaagatggcgacggtg
tgggatgaggctgagcaagatggaatcggggaggaagtactcaagatgtccacagaagag
atcgtgcagcgcacacggctgctggacagtgaaatcaagatcatgaagagtgaagtgtta
cgagtcacccacgaactccaagccatgaaggacaagatcaaagagaacagtgagaaaatc
aaagtgaataagaccctgccgtacctggtctccaacgtcatcgagcttctggacgttgat
cccaatgaccaagaggaagatggtgccaatattgacctggattcccagaggaagggcaag
tgtgcagtgatcaaaacctctacacgacagacatactttctacctgtgattgggttggtg
gatgctgaaaagctgaagccaggagacttggtgggtgtgaacaaagactcctacctgatc
ctggagaccctgcccacagagtatgactcgagggtgaaggccatggaggtggacgagagg
cccacagagcaatacagtgacatcgggggcctggacaagcagattcaggagctggtggag
gccattgtcctgccaatgaaccacaaggagaagtttgagaacttggggatccagcctcca
aagggggtgctgatgtacgggcccccaggtacagggaagaccttgctggcccgggcctgt
gctgcacagaccaaggccaccttcctgaagttggcgggcccccagctggtgcagatgttc
attggggatggtgccaagctggtccgggacgcctttgctctggccaaggagaaagcgccg
tctatcatcttcattgatgagctggatgccattggtaccaagcgctttgacagcgagaag
gccggagaccgggaggtgcagaggacgatgctggagcttctgaaccagctggatggattc
cagcccaacacccaagtgaaggtgattgcagccactaacagggtggacatcctggaccct
gcccttctccgctcaggccgcctggaccgcaagattgagttcccgatgcccaacgaggag
gcccgggccagaatcatgcagatccactcccgaaagatgaacgtcagtcccgacgtgaac
tacgaggagctggcccgctgtacagatgacttcaacggggcccagtgcaaggctgtgtgt
gtggaggcgggcatgatcgcgctgcgcaggggcgccacagagctcacccacgaggactac
atggagggcatcctggaggtccaggctaagaagaaggccaacctgcagtactacgcctag
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