Sus scrofa (pig): 100512515
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Entry
100512515 CDS
T01009
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X2
KO
K15194
AF4/FMR2 family member 2
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100512515 (AFF2)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100512515 (AFF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
100512515
NCBI-ProteinID:
XP_005654357
Ensembl:
ENSSSCG00000012730
Vega:
OTTSUSG00000004918
LinkDB
All DBs
Position
X:120777559..121263574
Genome browser
AA seq
1303 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRSALKKREWERRNQEVQQEDDLFSSGFDLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLANHSNQNHLVGIPKNTVPQTPINKNEPSFFPEQKNRMIP
PHQDNTHASGPMPPPSVVILNSTLIHSNRKSKPDWPRDGHNPSIVPASQAGGQPSKMAPT
TQDQPPARLEDFFVYPAEQPQVGTVEEPNPPVKEDSGGDTFKEIFQSNSPEESEFTVQTP
GSPLVASSLLAPSSGLSVQNFPPGLYCKTSMGQQKPTAYVRPMDGQDQAPDISPTLKPSI
EFENSFGNLSFGSLLDGKPSAPSSKTKLPKFTILQTSEVSLPSDPSCVEEILREMTHPWP
TPLTAMHTPGNSEHSTFSTPGQESQHLTPGFALQKWSDPTSRASTKSVPFKSMLEDDLKL
SSDEDDLEPVKTLTTQCTATELYQAVEKAKPKNNPVNPLLATPQPPAAAPASGGSGSSSD
SESSSESDSDTESSTTDSESNEAPRVATPEPEPPSTNKWQLDKWLNKVTSQNKSFICGQN
ETPMETISVPPPVIQPMEVQVKVKTNPSQVLAEPKERPLLSLIREKARPRPAPKTPETKA
LKHKLSTTLETASQRTIGKKQPKRVEKNTSIDEFTWPKPNITSSAPKDKESVELPDPPRG
RSKATAHKPVPRKEPRPSIPLAAEKKKYRGPGKIVPKSREFIETDSSTSDSNTDQEETLQ
IKVLPPCMAPGGNTAKSKEACGASLTLSSFISSANGNNPSVTNEEPTFSPIPVLQTELLS
PLRDHENLKNLWVKIDLDLLSRVPGHNSLQAAPAKPDHKETAPKPKRQAAAAAAEKAAPN
RKRKHKPTEVAEKIPEKKQRLEEAATICLLPPCISPAPPQKPPNTKENNASRRANRRKEE
KLFPPPLSPLPEDPPRRRNVSGNTGPFSQDKSIPPIGQITSTKPKRSEGKFCATFKGISV
NEGDTPKKAASATVTVTNTALATATVTATAIVTATVTATATATATATTTTTTTTISTITS
TITTGLMDSSHLEMTSWAALPLLSSSTTNVRRPKLTFDDSVHNADYYMQEAKKLKHKADA
LFEKFGKAVNYADAALSFTECGNAMERDPLEAKSPYTMYSETVELLRYAMRLKNFASPLA
SDGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKQNASKVAQIPSPWVGNGK
NTPSPVSLNNVSPINAMGNCNNGPVTIPQRIHHMAASHVNITSNVLRGYEHWDMADKLTR
ENREFFGDLDTLMGPLTQHSSMTNLVRYVRQGLCWLRIDAHLL
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggatctattcgactttttcagggactgggacttggagcagcagtgtcactatgaacaa
gaccgtagcgcacttaagaaaagggaatgggagcggaggaatcaagaggtccagcaagaa
gatgatctcttttcttcaggctttgatctttttggggagccctacaagacaaacaaaggt
gacgcacttgccaaccgagtccagaacacgctgggaaactatgatgaaatgaaggatttg
ctagctaaccattctaatcagaatcatctagtgggaatcccaaagaataccgtgccccag
actcccatcaacaaaaatgaaccaagcttttttccagagcaaaagaaccggatgatccca
cctcaccaggataacactcacgcctcgggaccaatgcctccaccttcggtcgtgatactg
aattcgactctgatacacagcaacaggaaatccaaacctgactggccgcgagatggtcac
aaccctagcatcgtgccggccagccaggccggtgggcagccaagcaagatggcaccgact
acacaggaccagcccccagccagactggaagacttctttgtctacccagctgaacagccg
caagttggaacagttgaagagccaaacccaccggtgaaggaagacagtggaggggatact
ttcaaagaaatctttcagtccaactcgcccgaagaatctgaatttacagtgcaaacgccc
gggtcgcccctagttgcctcctctttattagctcccagcagtggcctttcggttcaaaac
ttcccaccggggctttactgcaaaacaagcatggggcagcaaaaaccaaccgcatacgtc
agacccatggatggtcaggaccaggcaccggacatctctcctacactgaaaccttcgatt
gaattcgagaacagctttgggaatctgtcatttggatcactcttggatggaaaacccagt
gcacccagttcaaagactaaactgccaaagttcacgattctccaaacaagtgaagtaagc
cttcccagtgatccaagctgtgttgaagaaatcttgcgggagatgacccacccctggcct
actcctctcactgccatgcatactcccggaaactctgagcacagcactttttccacccca
ggacaggaatcccaacatctgaccccaggattcgccttacaaaagtggagtgacccgacc
agcagagcttctaccaagtcagtaccattcaagtcgatgcttgaagatgacctgaagctg
agcagtgacgaagatgaccttgaacccgtgaagaccttgaccactcagtgcaccgccact
gagctctaccaggctgttgaaaaggcaaaacctaagaataatcctgtgaacccactcttg
gccacgcctcagcccccagctgcagcaccagccagcgggggatccggcagctccagtgac
tccgagagcagctccgagtccgactcagacactgaaagcagcaccactgacagtgaatcc
aatgaggcgccacgtgtggccactcccgagcctgagccgccctccaccaacaagtggcag
ttggacaagtggctgaacaaagtgacatcccagaacaagtcgtttatttgcggccaaaat
gaaacacccatggagaccatttctgtgcctcctccagtcatccagcccatggaagtccag
gtcaaggtgaagacgaaccccagccaggtccttgctgaacccaaagagcggcctctcctc
agcctcatcagggagaaagcccgtccacggcccgccccgaaaactccagaaacaaaggcg
ttgaagcataaattgtccacaactctcgagacagcttctcaaaggaccatagggaaaaaa
cagcccaaaagggtcgagaagaataccagcattgacgaatttacctggcccaaaccaaat
atcaccagcagcgctcccaaagacaaggaaagcgtggagcttccggacccaccgagaggc
cgcagcaaagccactgcccacaagcccgtccctaggaaagaaccgaggcctagcatcccc
ttggctgccgagaagaagaagtaccgagggcctggcaagatcgtgcccaagtcccgggaa
ttcatcgaaaccgactcgtccacgtctgactccaacaccgatcaggaagagactctgcag
atcaaagtcctgcctccttgcatggctcctgggggcaacactgccaagtccaaggaagcc
tgcggcgccagcctgaccctcagcagcttcatcagcagtgccaacggcaacaacccatcc
gtcacaaatgaagagcctactttctcgcccatccctgtcctgcaaaccgagcttctgtct
cctctacgagatcacgagaatctgaaaaacctctgggtgaagattgaccttgacctgctg
tctagagtgcctggccacaactcactccaagcagcgccagccaagccggaccacaaggag
acggccccaaagcccaagcggcaggctgctgctgcagctgcagagaaagccgcccccaac
cgcaagcgcaagcacaagccaacagaagttgcggagaaaatccctgagaagaagcagcgc
ctggaggaggccgccaccatctgcctgctcccaccttgcatctcaccagctccaccccag
aagcctcccaacactaaagaaaataatgcatccaggagagcaaatagaaggaaagaagaa
aagctctttcctcctccactttcccccctgccagaggaccctccacgccgcaggaacgtc
agtggcaataccggtcccttcagtcaagacaaaagcatccctccgattggacaaatcacc
tcgaccaagcctaagaggagtgaaggcaaattctgtgccactttcaaggggatatctgtg
aatgagggagacactcccaaaaaggcagcctctgccaccgtcactgtcaccaacactgct
cttgccacggccaccgtcactgctactgccattgtcacggccactgtcacggccaccgcc
acggccaccgctacggccacgaccacgaccacgaccaccaccatttccaccatcacgtcc
accatcacgaccggcctcatggatagcagccacctggagatgacatcctgggcagccctg
ccccttctgtccagcagcactaccaacgtccggcgacccaaactcactttcgatgactcg
gttcacaacgctgattattacatgcaagaggctaagaagctgaagcacaaagctgacgca
ctgttcgagaaatttggcaaagccgtgaattacgccgacgcggccctgtccttcacagag
tgtggcaacgcgatggagcgcgacccgctggaagccaagtctccgtataccatgtactcc
gagaccgtggagctcctgaggtatgccatgaggctgaagaactttgcaagccccctggct
tcggatggggacaaaaagctggccgtactatgctaccggtgcttatccctcctctacctg
cgcatgttcaaactgaagaaggaccacgccatgaagtactccagatcgctgatggaatat
tttaagcaaaatgcttcaaaagtcgctcagataccatctccctgggtaggcaatggaaag
aacactccatccccagtgtctctcaacaacgtctctcccatcaatgcaatggggaactgt
aacaacggcccagtcaccatcccccagcgcattcaccacatggccgccagccacgtcaac
atcactagcaacgtgttacggggctacgaacactgggacatggccgacaaactgacaaga
gagaacagagaattcttcggcgacctggacacgctgatggggcctctgacccagcacagc
agcatgaccaatctcgtccgctacgttcgccagggactgtgctggctgcgcatcgatgcc
cacttgttgtag
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