Sus scrofa (pig): 100512566
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Entry
100512566 CDS
T01009
Symbol
SNED1
Name
(RefSeq) LOW QUALITY PROTEIN: sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100512566 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
100512566 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
cEGF
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_Teneurin
Ig_Rha78A_N
Motif
Other DBs
NCBI-GeneID:
100512566
NCBI-ProteinID:
XP_003133861
Ensembl:
ENSSSCG00000016381
UniProt:
A0A8D0V1R5
LinkDB
All DBs
Position
15:139821021..139881099
Genome browser
AA seq
1414 aa
AA seq
DB search
MPRGATWALLLAAALGLGARGVRGAVALEDFYPFGAERGDAVTPKQDDGGSGLRPLSVLF
PFFGAEHSGLYVNNNGVISFLKEVSQFTPAAFPVARDRCVVAAFWADVDNRRAGDVYYRE
ATDAATLRRATGDIRRYFPELPGFSATWVFIATWHRVTFYGGSSSSPVNTFQTVLITDGR
LSFTIFNYETITWTTGTHASSGGNATGLGGIAAQAGFNAGDGRRYFSIPGSRTADVAEVE
TTTNVGVPGRWAFRIDDAQVRVGGCSHTTSVCLALRPCLNGGKCIDDCVTGSPSYTCSCL
SGFTGRRCHLDVNECASHPCRNGGTCTSGVDSFSCQCPAGFGGHTCETAQLPCDAKECEN
GGWCQAEGGTAVCVCPAGYTGAACETDVDECRSGPCLNGGSCVDLLGNFSCLCAEPFQGP
RCETGKPPVSDACLSAPCQNGGTCVDADEGYVCECPEGFMGLHCRERTPQDCECRNGGRC
LGTNTTLCQCPPGFFGLLCEFEVTATPCNVNTQCPDGGYCMEYGGSYLCVCHTDHNISHA
LPSPCDSDPCFNGGSCDAHDDSYTCECPRGFHGRHCEKARPRLCSSGPCKNGGTCKEAGG
EYHCTCPYPFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSP
CFRSPCMNGGTCEDLGTDFSCRCQAGYTGRRCQAEVDCGXPEEVKHATLRFNGTRVGSVA
VYSCDRGYSLSASNRVRVCQPQGVWSEPPQCHEIDECRSQPCLHGGSCQDRVAGYLCVCR
PGHEGAHCELETDACRVQPCRNGGSCRGLRGAFVCQCPPGFTGVRCETEVDACHPSPCQH
GGRCENDGGAYLCVCPEGFFGYHCETVSDPCFSSPCGGRGYCLASNGSHSCTCKVGFTGK
DCAKELFPPTALKVERVEESGLSISWRPPDSQAARQMLDGYAVTYASSDGSYRRTDVVDR
SRSSHQLRALAAGKAYNISVFSVKRNANNKNDISRPAVLLARTRPRPVEGLEVTNVTANA
ISVQWSLHRIRHATVSSVRVSIRHPEAQEEQSTDVDRSADKFTFGALLPGRRYAIWATAL
TGLGVQERPTESLASAPLHVWTRPLPPANLTAARVTATSAHVVWDAPAPGASLEAYVVNV
TSSQSTKSRSVPNGRLVSYTVRDLLPGRRYQLSVTAVQSTEGGPLHSEPAHLYIITSPRD
GADRRWHREGLPPRVLRNRPPPARLPELRLLNDHGALDTPTQAPRFSELVDGRGRVSAKW
GGSPGKRVTVRSQPTALVQLESAEEAPTQASLAFQLPDRSGDKDTDGAPGNCSENPCQNG
GTCVPGVDAHSCDCSPGFKGRRCELACRKVPQPCTRLFSETKAFPVWEGGVCHHVYKRVY
KVHPDTCFRESCESTRTRRTPDRKRSNSPTLEKS
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcggcgccacctgggcgctgctcttggccgcggccctggggctcggggcgcgc
ggggtgcgcggcgcggtggccctcgaggacttctacccgttcggcgcggagcgcggcgat
gccgtcacccccaagcaggacgacggcggctccggactgcggccgctctccgtgctcttc
ccgttcttcggcgcggagcactccggactctacgtgaacaacaacggggtcatctccttc
ctgaaggaggtctcgcagttcactcccgcggcctttcccgtcgccagggaccgctgcgtg
gtggcggccttctgggcggacgtggacaatcggcgggcaggggacgtgtactaccgggag
gccaccgacgcggccacgctgcgcagagccacgggcgacatcaggcgctacttccctgag
ctcccaggcttctcggccacctgggtcttcatagccacctggcaccgcgtcaccttctac
ggaggcagctcctcctcccccgtcaacacgttccagaccgtgctcatcaccgacggccgg
ctctccttcaccatcttcaactacgagaccatcacgtggaccacgggcacgcacgccagc
agcgggggcaacgccacaggcctggggggcatcgcggctcaggccggcttcaacgcaggt
gatgggcggcgctacttcagcatccccggctcgcgcacagcggacgtggccgaggtggag
accaccaccaacgtgggcgtgcccgggcgctgggcgttcagaatcgatgatgcccaggtg
cgcgtggggggctgcagccatacaacctctgtgtgcctggccctgcgcccctgcctcaac
ggcggcaaatgcatcgacgactgcgtgacgggcagcccctcctacacctgctcctgcctc
tcgggcttcacggggaggaggtgccacctggatgtgaatgagtgtgcctcccacccgtgt
cggaacggcgggacctgcacgagcggcgtggacagcttcagctgccagtgcccggctggc
ttcgggggacacacctgcgagacagcccaacttccatgtgacgccaaagagtgtgagaac
ggcggctggtgccaggctgagggcggcaccgccgtgtgcgtgtgcccggccggctacacg
ggcgcagcctgcgagacagacgtggacgagtgccgctccgggccctgcctgaacggaggg
tcgtgcgtggacctgctggggaatttcagctgcctgtgtgcagagcccttccagggacct
cgctgcgagacaggaaaacccccagtgtccgacgcctgcctttcggccccttgccagaac
gggggcacctgcgtggatgcagatgagggctacgtgtgcgagtgcccggaaggcttcatg
ggcctccactgcagggagagaaccccccaagactgtgagtgccgcaacggaggccggtgc
ctggggaccaacaccaccctgtgccagtgtcccccaggcttcttcgggctcctctgcgaa
tttgaagtcacggccacgccctgcaacgtgaacacacagtgccccgacgggggctactgc
atggagtacggggggagctacctctgcgtctgccacaccgaccacaacatcagccacgca
ctgccgtccccctgcgactcggacccctgcttcaacggaggctcctgtgacgcccacgac
gactcctacacgtgcgagtgcccgcggggcttccacggcaggcactgcgagaaagcccgg
ccgcgcctgtgcagctcagggccctgcaagaacggcggcacgtgcaaggaggcgggcggc
gagtaccactgcacctgcccctaccccttcaccgggaggcactgcgagatcgggaagcca
gactcgtgcgcctctggcccctgtcacaacggtggcacctgcttccactacatcggcaaa
tacaagtgtgactgtcccccaggcttctccgggcggcactgtgagatagccccctccccc
tgcttccggagcccgtgtatgaatgggggtacctgcgaggacctgggcacagatttctcc
tgccgctgccaagcagggtacacgggacgccggtgccaggcagaggtggactgtgggncc
cccgaggaggtgaaacacgccaccctgcgcttcaacggcacccgggtgggctcggtggcc
gtgtactcgtgtgaccgcggctacagcctcagtgcctccaaccgcgtccgggtctgccag
ccacagggcgtctggagcgagcctccccagtgccacgaaatcgacgagtgccgatcccag
ccgtgcctgcatgggggctcctgccaggaccgcgtcgctgggtacctgtgcgtctgccgc
ccaggccacgagggcgcccactgtgagctggagacagacgcatgccgggtgcaaccctgc
agaaacggaggctcctgcaggggtctccgaggggcctttgtctgccagtgccccccaggc
ttcacaggagtccgctgcgagacagaggtggatgcctgtcaccccagcccctgccagcac
ggcggccgctgcgagaacgacgggggcgcctacttgtgtgtctgcccggagggcttcttc
ggctaccactgtgagacagtgagtgacccctgcttctccagcccctgtgggggccgcggc
tactgcctggccagcaatgggtcccacagctgcacttgtaaagtgggcttcacgggcaag
gactgtgccaaagagctcttcccaccaacggccctcaaggtggagcgagtggaggagagc
gggctgtccatctcctggcgcccccccgacagccaggctgccaggcagatgctcgacggc
tacgcggtcacctacgcctcttccgacggctcctaccgccgcacggacgtcgtggaccgg
agccgctcctcgcaccagctccgggccctggcggctggcaaggcctacaacatctccgtc
ttctcggtcaagcgcaatgccaacaacaagaacgatatcagccggcccgcggtgctgctc
gcccgcacgcgaccccgccctgtcgagggccttgaggtcaccaacgtgacggccaatgcc
atctcggtgcagtggtccctgcacaggatccgccacgccaccgtcagcagcgtccgcgtg
tccatccgccaccccgaggcccaggaggagcagtccacagacgtggacaggagcgcggac
aagttcacattcggggccctgctgccaggaagaaggtacgccatctgggcgacggccctc
acggggctgggggtgcaggagcgtcccaccgagagcctggcctcggccccgctgcacgtg
tggacccggcctctgccgccagccaacctgaccgccgcccgagtcacagccacctccgcc
catgtggtctgggacgcccccgctccgggcgcctcgctggaggcgtatgtcgtcaatgtg
acctccagccagagcaccaagagccgctccgtccccaacgggaggctggtgtcctacacg
gtgcgggacctgctgcccggacggcggtaccagctctcagtgacagccgtgcagagcacc
gagggcggcccgctgcacagcgagcccgcgcacctgtacatcatcacctccccaagggac
ggcgccgacagacgctggcaccgggaaggactgcccccgcgggtgctcagaaaccggcca
ccccccgcacgcctgccggagctgcgcctgctcaacgaccacggtgcccttgacacaccg
acccaggcccccaggttctcggagcttgtggacggcagaggacgagtgagcgccaagtgg
ggcggctcacctggcaaacgggtcactgtgagatcacaacccactgcgctggtgcagctt
gagagcgcagaggaggcccccacgcaggccagcctggccttccagctcccagaccgcagc
ggtgacaaggacacggatggcgcccctggcaactgttcagaaaacccctgtcagaacgga
ggcacctgcgtgcccggcgtggatgcccacagctgtgactgcagccccgggttcaaaggc
agacgctgcgagcttgcctgcagaaaggtgccccagccctgcacgcggctcttctctgag
acgaaggcctttccggtctgggaaggaggcgtctgccaccacgtgtataagagagtctac
aaggtgcacccagacacctgcttcagagagagctgtgagagcacccgcaccaggagaacg
cctgacaggaaacgaagcaacagtcctacactggagaaatcttaa
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