Sus scrofa (pig): 100512854
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Entry
100512854 CDS
T01009
Symbol
NFX1
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional repressor NF-X1
KO
K12236
transcriptional repressor NF-X1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100512854 (NFX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100512854 (NFX1)
04121 Ubiquitin system [BR:
ssc04121
]
100512854 (NFX1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100512854 (NFX1)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
100512854 (NFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
IP_trans
TcaA_3rd_4th
Motif
Other DBs
NCBI-GeneID:
100512854
NCBI-ProteinID:
XP_020920361
Ensembl:
ENSSSCG00000010993
ENSSSCG00000010994
LinkDB
All DBs
Position
10:complement(33126460..33200819)
Genome browser
AA seq
1152 aa
AA seq
DB search
MRIFSRRRKSRARDRVTALAGLQGSPQVLRHGMAEAPPVSGTFKFNTDAAEFIPQERKNS
GLNSGSQRRLDSNRIGRRNYSSPPPCHLSRQVPYDDISALHQHSYHPSGSKPKNQQTSFQ
SSASNKSLKSHGLQNHPWQKLKSEKQHIRVKRAQSLIDQTSEAAGLESVAKSESGTNLRE
HSPSESEKEIVGADPRGAKPKKATQFVYSYGRGPKVKGKLKSEWGNRLTPKPEDAGSENT
KPVGVIQPDSSDTSSRKGIVDGSGARRSEQKRYLQKRPPWEVEGARPRPGRNPPKQEGQR
HTNIGFRNNTASIPKDNLNERPAKSACDSENLAVINKSSRRVDLEKCAVRRQDPQVTSFP
RGKQNHLLKNVETHTGSLIEQLTTEKYECMVCCELVRVTAPVWSCQSCYHVFHLNCIKKW
ARSPASQADGQSGWRCPACQNVSAHVPNTYACFCGKVKNPEWSRNEIPHSCGEVCRKKQP
GQDCPHSCNLLCHPGPCPPCPAFMTKTCECGRPRHTVRCGQAISIHCSNPCENILNCGQH
HCAELCHGGQCQPCRIILNQVCYCGSTSRDVLCGTDVGKSDGFGDFGCLKICGKDLKCGN
HTCSQVCHPQPCQPCPRLPQLVRCCPCGQTPLSQLLELGSSGRKTCMDPVPSCGKVCGKP
LPCGSLDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKELPCTSLKSEADATFMCDKRC
NKKRLCGRHKCNEICCVDKEHKCPLICGRKLRCGLHRCEEPCHRGNCQTCWQASFDELTC
XCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEDKCPPCTFLTQKWCMGKHE
LRSNIPCHLVDISCGLPCGATLPCGMHRCQRLCHKGECLVDEPCKQPCTTSRADCGHPCM
APCHLSSPCPVTACKAKVELQCECGRRKETMICSEASSTYQRIAAISMASKITDMQLGDS
VEISKLITKKEIHQARLECDEECSALERKKRLAEALHISDDSDPFNVRSSASKFSDSLKE
DARKDLKFVSDIEKEMEALVEAVNKGKNNKKSHCFPPMNRDHRRIIHDLAQVYGLESVSY
DSEPKRNVVVTAVRGKSICPPNTLTSVLEREMQSRPPPPIPHHRHQTDKNPGSSNLQKIA
KEPIIDYFDVQD
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatattctcccggcgccggaagtccagggcacgtgaccgggtgacagcgcttgct
gggctgcagggctcgcctcaggtgttgcggcacgggatggcggaggcgcctcctgtctca
ggtacttttaaatttaatacagatgctgctgagttcattcctcaagagagaaaaaattct
ggtctaaacagtgggagtcaaaggagactagattctaataggattggtagaagaaattac
agttcaccacctccctgccacctttctaggcaagttccttatgatgacatttctgctctt
catcagcacagttatcatccttcaggaagcaaacctaagaatcaacagacttctttccaa
tcctctgcttctaataaatcactcaagagccatggccttcagaatcacccttggcagaaa
ttgaagagtgaaaagcagcacatcagagttaagagagcacagagtctcattgaccagacc
tcagaagcagctgggttagaaagcgtggccaagtccgagagtgggaccaacctcagagag
cacagcccgtctgagagtgagaaggaaattgtcggtgcagaccccagaggagcaaaaccc
aaaaaagcaacccagtttgtatacagctatggtagaggaccaaaagtcaaggggaagctc
aaaagtgagtggggtaacagattgactccaaaacctgaggatgcaggatctgaaaacacc
aaacctgtgggggttatccagcctgattcttcggatacatcctctagaaaaggaatagtg
gatggctctggggccagacgcagcgagcagaaaagatacctacagaagaggcctccctgg
gaagtggagggggccaggccacgaccaggcaggaatccaccaaaacaggagggccaacga
catacaaacataggattcagaaacaacacggcctccattccaaaagataatcttaatgaa
agaccagcaaaatctgcctgtgacagtgagaacttggcagtcatcaacaagtcttccaga
agggttgacctagagaaatgtgccgtaaggaggcaggatcctcaggtaacatctttcccc
cgaggcaaacagaaccacctgctgaagaatgtggaaacacacacaggttctctaattgaa
cagctgactacagaaaaatatgagtgcatggtgtgctgtgaattggttcgtgtcacagcc
cctgtgtggagttgtcagagctgttaccatgtgtttcatttgaactgcataaagaaatgg
gcaaggtctccagcgtctcaagcagatggccagagtggttggaggtgccctgcatgtcaa
aatgtttctgcacatgttcctaatacctatgcttgtttctgtggcaaggtaaagaaccct
gaatggagcagaaatgaaattcctcatagttgtggtgaggtctgtagaaagaaacagcct
ggccaggactgcccacattcctgtaaccttctgtgccatcctggaccttgcccaccctgt
cctgcctttatgactaagacgtgtgaatgtggacgacccaggcacacagttcgctgtggt
caggctatctcaatccactgttctaacccttgtgagaatattttgaattgtggtcagcac
cactgtgctgagctgtgccatggcggtcagtgccagccttgtcggatcatattgaaccag
gtatgctactgtggcagcacctcccgagacgtgttatgtggaacagacgtaggaaagtct
gatggatttggggactttggctgtttaaagatatgtggcaaggatttgaaatgtgggaac
catacgtgttctcaagtgtgccaccctcagccctgccagccctgcccacggctcccccag
ctggtgcgttgctgcccttgtggacaaactcctctcagccaattgctagaacttggaagt
agcggtcggaaaacatgcatggatcctgtcccttcatgtggaaaagtgtgcggcaagcct
ctcccttgtggttccttagatttcattcatacctgtgaaaagctctgccatgaaggagac
tgtggaccatgctctcgcacatcagttatttcctgcagatgctctttcagaacgaaggag
cttccatgtaccagtctcaaaagtgaagcagatgctacatttatgtgtgacaagcggtgt
aacaagaagcggttatgtggacggcataagtgtaatgagatatgctgtgtggataaggag
cacaagtgtcctttgatttgtgggaggaaactccgttgtggccttcatagatgtgaagaa
ccttgtcatcgtgggaattgccagacgtgttggcaagctagttttgatgaattaacctgc
ncatgtggcgcgtcagtgatctaccctccagttccctgtggtaccaggccccctgagtgt
acccaaacctgtgccagagtccatgaatgtgaccatccagtatatcattcttgtcatagt
gaagacaagtgtcccccttgtacttttctaactcagaaatggtgcatgggcaaacatgag
ttacgaagcaacatcccctgtcacctggttgatatctcttgcggattaccctgtggtgcc
acactgccgtgtgggatgcacaggtgtcagagactctgtcacaaaggagagtgtcttgtg
gatgagccctgcaagcagccatgcaccacctccagagctgactgtggccacccatgtatg
gcgccctgccacctcagctcaccctgcccagtgactgcttgtaaagctaaggtagagctg
cagtgtgaatgtggacgaagaaaagaaaccatgatttgctctgaagcatccagtacttat
caaagaatagcagctatttccatggcctcgaaaataacagacatgcagcttggagattcg
gtggagatcagcaagttaattactaagaaggaaattcaccaagccaggctggagtgtgat
gaggagtgttcagccttggaaaggaagaagcgattagcagaggcgttgcatatcagtgat
gattctgatcctttcaatgtacgttcttctgcgtcaaaattcagtgacagtttgaaagaa
gatgccaggaaggacttaaaatttgtcagtgacattgagaaggaaatggaagcccttgtg
gaggccgtgaataaggggaagaacaataagaaaagccactgcttccctcccatgaaccga
gaccaccgccggatcatccatgacctggcccaagtgtacggcctggagagcgtgagctat
gacagtgaaccaaagcgtaacgtcgtggtcactgcagtcagagggaagtctatttgtcct
cctaacacgctgacgagtgtacttgaaagggaaatgcagtcacggcctccaccaccgatt
cctcatcatagacatcagacagacaagaatcctgggagcagtaatttacagaagatagcc
aaggagccaataattgactactttgatgtccaggactga
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integrated database retrieval system
