Sus scrofa (pig): 100513014
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Entry
100513014 CDS
T01009
Symbol
SLC6A13
Name
(RefSeq) LOW QUALITY PROTEIN: sodium- and chloride-dependent GABA transporter 2
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04082
Neuroactive ligand signaling
ssc04721
Synaptic vesicle cycle
ssc04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100513014 (SLC6A13)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100513014 (SLC6A13)
04721 Synaptic vesicle cycle
100513014 (SLC6A13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssc02000
]
100513014 (SLC6A13)
Transporters [BR:
ssc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100513014 (SLC6A13)
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Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100513014
NCBI-ProteinID:
XP_005664150
Ensembl:
ENSSSCG00000030076
UniProt:
A0A8D0YZT0
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All DBs
Position
5:complement(67574149..67617513)
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AA seq
665 aa
AA seq
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MWAGPSLELQVPQRSGNHTLNSQHLPFPLDILPSDQTSGSDCTKVGDIFFSSFPASRSQT
AGGMDSRVSGTTSNGETRPVYPGMEKAEEDGTLERGQWTNKMEFVLSVAGEIIGLGNVWR
FPYLCYKNGGGAFFIPYLIFLFTCGIPVFLLETALGQYTSQGGITAWRKICPLFEGIGYA
SQMIVVLLNVYYIVVLAWALFYLFSSFTVDLPWGSCRHHWNTEHCVEFQRTNGSLNVTSE
NATSPVIEFWERRVLKISDGIQHLGALRWELALCLLLAWVICYFCIWKGVKSTGKVVYFT
ATFPYLMLVVLLIRGXTLPGAAQGIQFYLYPNLTRLWDPQVWMDAGTQIFFSFAICLGCL
TALGSYNKYHNNCYRDCIALCFLNSGTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGL
AFIAYPRAVVMLPFSPLWACCFFFMVVLLGLDSQFVCVESLVTALVDMHPRVLRKKNRRE
VLILGVSVTSFLVGLVMLTEGGMYVFQLFDYYAASGMCLLFVAIFESLCVAWAYGAGRFY
DNIEHMIGYRPWPLIKYCWLFLTPAVCTATFLFSLIKYTPLTYNKKYMYPWWGDALGWLL
ALSSMVCIPTWSFYKLSTLKGSLRERVRQLMCPAEDLPQWDRAGPSXPATPRTSLLILTE
VESHC
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctgggccaagtttagaattacaagtgccgcagaggagtgggaatcacacttta
aatagccagcacctccccttccccctagatattctcccctctgaccagacctctggcagt
gactgcactaaggttggtgacattttcttctcttcttttcctgcttccaggtctcagaca
gcaggtggaatggatagcagggtttcaggcacaaccagtaatggagagacaagaccagtg
tacccaggcatggaaaaggcggaggaggatggcaccctggagcggggccagtggaccaac
aagatggagttcgtgctgtccgtggccggggagatcattgggctgggcaacgtctggagg
ttcccctacctctgctacaaaaacgggggaggtgccttcttcatcccctacctcatcttc
ctcttcacctgcggcatccccgtcttcctcttggagacagcgctgggccagtacaccagc
caggggggcatcacagcctggcggaagatctgccccctctttgagggcatcggctacgcc
tcccagatgatcgtcgtcctcctcaacgtctactacattgtcgtcctggcctgggccctc
ttctacctcttcagcagcttcactgtcgacctgccctgggggagctgccgccaccactgg
aacacagagcactgcgtggagttccagaggaccaacggctccctgaatgtgacctccgag
aacgccacctctcccgtcatcgagttctgggagaggcgcgtcctgaagatctcggatggc
atccagcatctgggggccctgcgctgggagctggccctgtgtctcctgctcgcctgggtc
atctgctacttctgcatctggaagggggtcaagtccacgggcaaggtggtatacttcaca
gccacgtttccttacctcatgctggtggtcctgttaattcgagggntgacgctgccaggg
gcagctcaaggaattcagttctacctgtacccaaacctcacgcgactgtgggacccccag
gtgtggatggatgctggcacccagatcttcttctccttcgccatctgcctcgggtgcctg
acggccctgggcagctacaacaagtaccacaacaactgctacagggactgcatcgccctc
tgcttcctcaatagcggcaccagcttcgtggccgggtttgccatcttctctatcctgggc
ttcatgtctcaggagcagggggtgcccatctctgaggtggccgagtcaggccccggcctg
gctttcatcgcctaccccagggctgtggtgatgctgcccttctctccactctgggcctgc
tgcttcttcttcatggtcgtcctcctggggttggacagccagtttgtgtgcgtggaaagc
ctggtgacagcactggtggacatgcatccccgtgtgttgcgtaagaagaaccggagggag
gtcctcatcctcggagtgtctgtcacctccttcctcgtggggctggtcatgctcacagag
ggcggtatgtacgtgtttcagctctttgactactatgcagccagtggcatgtgcctgctg
ttcgtggccatcttcgagtccctctgtgtggcttgggcctatggagcagggcgcttctat
gacaacattgaacacatgattgggtacaggccatggcccctcatcaaatactgctggctc
ttcctcacaccagccgtgtgcacagccaccttcctcttctccctgatcaagtacaccccg
ctgacctacaacaagaagtacatgtacccgtggtggggcgatgccctgggctggctcctg
gctctctcctccatggtctgcattcccacctggagcttctacaaactcagcaccctcaag
ggctctctcagagagagagttcgccagctcatgtgcccagctgaggacctgccccagtgg
gacagggcaggaccctctngccccgcaacacccaggacatcacttctcatactcacagaa
gtggagtctcactgctag
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