Sus scrofa (pig): 100513212
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Entry
100513212 CDS
T01009
Symbol
BBS4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100513212 (BBS4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100513212 (BBS4)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
100513212 (BBS4)
Cilium and associated proteins [BR:
ssc03037
]
Primary cilia and associated proteins
BBSome
100513212 (BBS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_11
TPR_16
TPR_17
TPR_14
TPR_12
TPR_CcmH_CycH
ANAPC3
TPR_9
TPR_7
ARM_TT21_2nd
ARM_TT21_4th
PknG_TPR
TPR_15
Wzy_C_2
NatA_aux_su
ARM_TT21_C
TPR_MalT
ARM_TT21_N
HrpB1_HrpK
Mu-like_Pro
Motif
Other DBs
NCBI-GeneID:
100513212
NCBI-ProteinID:
NP_001231716
Ensembl:
ENSSSCG00000001924
LinkDB
All DBs
Position
7:complement(60631913..60693359)
Genome browser
AA seq
521 aa
AA seq
DB search
MAEGRLATRTQFLASAESQKPQLKKAPEFPILEKQNWLIHLHYIRKDYEACKAIIKEQLQ
ETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAILSPQCADNLKQVARSLILLGKHKAA
TEVYNEAAKLNQKDWEICHNLGVCYIYLKQFDKAQDQLHNALHLNRHDLTYIMLGKIHLL
EGDLDKAIEIYKKAVEFSPENTELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAIL
AAGSMMQTHGDFEVALTKYRVVACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLA
PFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDLENAKRA
YAEAVRLDKCNPLVNLNYAVLLYNQGEKRGALAQYQEMEKKVNLLKDSSSLEFDPEMVEM
AQKLGAALQAGEALVWTKPVKDPKSKHRTPSTSKTTSVQQPLGSNQALGQAMSSAATYRK
LPSGAGGTPQPTKPPSLPLEPEPTVEAQPTGASAQIREKQV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggggagactcgctacgagaactcaatttcttgcatctgctgaatctcaaaaa
cctcagctgaaaaaagctccagaatttcctattttggagaagcagaactggctgatacat
ctccactatatccggaaggattatgaagcatgcaaggctattatcaaagaacagcttcag
gagactcaggggttatgtgaatatgctatctatgtccaagcattgatatttcgcctggaa
ggaaacatccaagaatccctagaactctttcagacttgtgctattctcagccctcagtgt
gctgataacctcaagcaggtggccagatctttaattcttttgggaaaacataaagctgct
actgaagtatataatgaagcagctaaacttaaccagaaagactgggagatctgtcataac
ctgggagtttgctacatttatctgaaacaatttgacaaggcacaggaccagttgcacaat
gccctacatcttaacaggcatgatctcacttacataatgctgggcaagatccacttgctg
gagggagacttggacaaggccatcgaaatctacaagaaagcagtagagttctctccagaa
aatacagaacttcttacaactttaggattactctatctacagcttggcatttaccagaag
gcatttgaacatcttggaaatgcactgacttatgaccctaccaactacaaggccatcttg
gcagcaggcagcatgatgcagacccatggggactttgaggttgccctcaccaaatacaga
gttgtagcttgtgctgttccagaaagtcctcccctctggaataacatcggaatgtgtttc
tttggcaagaagaaatacgtggcagctatcagctgcctgaaacgagccaactacttggca
cccttcgattggaagattctgtataatttgggcctcgtacacttgactatgcagcagtat
gcctcagctttccatttcctcagtgcagccatcaacttccagccaaagatgggggagctg
tacatgctcttggctgtggctctgaccaacctggaggatctagagaatgccaagagagcc
tatgcagaagcagtgcgcctggataagtgtaaccctttagtaaacctcaactatgctgtg
ctgctgtacaaccagggcgagaagaggggtgccctggcccagtatcaggagatggagaag
aaagtcaacctactcaaggacagtagctctctggagtttgatccggagatggtggagatg
gcccagaagctgggagctgctcttcaggctggcgaggcactggtatggactaaaccagtt
aaagatcccaagtcaaagcaccggactccttctaccagcaaaaccaccagtgtccagcag
cctctgggctctaatcaggccctaggacaggcaatgtcttcagcagccacatacaggaag
ctcccctcaggtgccggaggaacaccccagcccacaaagccaccatctcttcctctggag
ccagagcccactgtggaagcacagccaactggagcatcagcacaaataagagaaaaacag
gtgtag
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