Sus scrofa (pig): 100513393
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Entry
100513393 CDS
T01009
Symbol
DDX31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
100513393 (DDX31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100513393 (DDX31)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100513393 (DDX31)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100513393 (DDX31)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
Pre-60S particles
Helicases
100513393 (DDX31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
100513393
NCBI-ProteinID:
XP_003122310
Ensembl:
ENSSSCG00000005729
UniProt:
A0A8D1ICL8
F1S0U0
LinkDB
All DBs
Position
1:complement(272383585..272454395)
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AA seq
816 aa
AA seq
DB search
MNSGVEWDLAPLPQARPRGAQAGQPPTRCGPSPERRGPCVCRPSGTRKGRGRRTLRGSYA
GSSRASHVGPSRAAGPVRETQTRLSAGMAAAGGALLHVPEPRAAAPRTFSRPRPAQARQR
AAATKRRNQASCEAPPAKRRSEASLPPARATDAKENPRAFKGKAQKAFSPETSSAGASDG
SRERKPGVKTSSLFRNNPEIPALLRPAVKQRQESVFTSDAFQALDLHPHLISTINTVLKM
SSLTSIQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPMVQSLQAVKPKIQRGDGPYALIL
VPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHI
KSTKNMRFCRIRWLILDEADRLLDLGFEKDIALILNAVNAERPERQNVLLSATLTEGVTR
LADISLHEPVRISVLEGSQDQMHPKSRAILGASPPAASSELDGFAIPVGLEQHVALVPSK
LRLVSLAAFILQKCKFEPDQKMIVFFSSCELVEFHHSLFLQTLLGGSGALAPGRLPSASP
PLTFLRLHGDMEQEERTAVFQEFSRSKAGVLLCTDVAARGLDLPQVTWIVQYTAPSSPAE
YVHRIGRTARIGFQGSSLLILAPSEAEYVNSLASHKIKVSEMKMEDILSVLTRDDCFKGR
RWGSQKCRAAGPQEIRERATVLQTVFEDYVHSSERTVSWAKKALQSFVRAYATYPRELKH
IFHVRSLHLGHVAKSFGLRDAPKNLSASALKKKKAHLRRPDPRRKTQSKHRLAELLRSEY
SSGMGASGAKVKRPNKRAGPRSAACAQRPALAVGQK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaactctggggtcgagtgggacttggcacctctgccgcaggccaggccacgaggggct
caagcggggcagccccccacgcgctgcggccccagccccgagcggcgcgggccgtgcgtt
tgcagaccttccgggacccggaaggggcgcgggcgcaggaccctgcggggcagctacgcg
gggtcctcgcgcgcgtcccacgtggggccgagccgagcggcggggccggttcgagagacc
cagacgcgcctttctgccggcatggcagccgccggtggagcgctcctccacgttcccgag
ccccgcgccgcagcccccaggacgttctccaggccccgcccggcgcaggcgaggcagcga
gcagcggccaccaagaggaggaaccaagcatcctgtgaggctcccccagccaaacggagg
agcgaagcatcccttcccccagccagggccaccgacgccaaagaaaatcccagggccttt
aaggggaaggcccagaaagccttctctcccgagacgtcgtcagccggggcgagcgacggc
agccgggagcggaaaccaggcgtgaagacgtcctcgctgtttaggaacaaccccgagatc
cccgcgctgctcagacctgcagtaaagcagcggcaagaaagtgtgttcacgtcagacgct
tttcaggccctggacctccacccacatttaatttccacaataaataccgtcttaaaaatg
tctagtctgaccagcattcagaagcagagtatccccgtgttgctggaaggcagagatgcc
ctggtgaggtcccagacgggctcaggtaaaactcttgcctattgcatccctatggtccag
tctcttcaagcagtgaaacccaaaatacagcgtggcgacggcccctacgctctcatcctg
gtgcccacgagagagctcgctctccaaagctttgatactgtccagaaactgcttaagcca
tttacctggatcgtgcctggagtgttaatgggaggagagaagagaaaatcagagaaggcc
agactccggaaaggaataaatatcctgatctcaactcctggacgcctcgtggatcatata
aagtccacaaagaacatgcgtttttgtcggatccggtggctgattttggacgaggcagac
agactcttggatttggggtttgagaaggacatcgcgctgatcctcaacgccgtcaacgcc
gagcgcccggagcggcagaacgtcctgctgtcggccacgcttacggagggtgtgacgcgg
ctggcggatatcagtttacacgagcccgtccgtatttctgtcctggaggggagccaggac
cagatgcacccaaagagcagagccattcttggagcttctccacctgcagctagcagcgag
ctggacggcttcgccatacccgtgggtctcgagcagcacgtggcgctggtccccagcaag
ctgaggctcgtctccctggcggccttcatcctgcagaagtgcaagttcgagcccgaccag
aagatgattgtctttttctcgagctgcgagctggtggagttccaccacagcctcttcctc
cagaccctgctgggcggctcgggggccctggccccggggcgcctgccatctgcctccccg
ccgttgacgttcctgcggctgcacggggacatggagcaggaggaaagaacagcagtgttt
caagaattctcacgttccaaagcgggcgtccttctttgcacggatgttgcagctcggggc
ctcgatctccctcaagtcacgtggattgtccagtacaccgctccgtcttcacctgctgaa
tacgtccaccggattgggaggactgcccggattggcttccaggggagcagcctgctcatt
ttggctccttcggaggcagaatatgtcaactcgttggcttctcacaaaatcaaagtttct
gagatgaagatggaagatattttgtctgttctgacaagggatgactgctttaaagggaga
cgatggggaagccagaaatgccgcgccgcgggcccccaggaaatccgcgagcgagccacg
gtcttgcagacggtctttgaagattacgtgcactccagcgagaggacggtctcctgggct
aagaaagccctgcagtccttcgtccgcgcctacgccacctacccccgcgagctgaagcat
atcttccacgtgcgatcgctccacctcgggcacgtggctaagagctttggactaagagac
gcccctaaaaacctcagcgcctcggctctaaagaagaagaaggcacacctgagaaggcct
gaccctcgcaggaagacccagagcaaacaccggcttgctgaactcctgcgttccgaatac
tccagcgggatgggggccagcggcgccaaggtcaaaaggccaaacaaacgcgcggggccc
cgcagcgccgcctgcgcccagcgcccagccttggccgtgggacaaaagtaa
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