KEGG   Sus scrofa (pig): 100513454
Entry
100513454         CDS       T01009                                 
Symbol
CUL4B
Name
(RefSeq) cullin-4B isoform X3
  KO
K10609  cullin 4
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03420  Nucleotide excision repair
ssc04120  Ubiquitin mediated proteolysis
ssc05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100513454 (CUL4B)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100513454 (CUL4B)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100513454 (CUL4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100513454 (CUL4B)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100513454 (CUL4B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100513454 (CUL4B)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     100513454 (CUL4B)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100513454 (CUL4B)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100513454 (CUL4B)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100513454 (CUL4B)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 100513454
NCBI-ProteinID: XP_013841811
Ensembl: ENSSSCG00000012603 ENSSSCG00000029478
Vega: OTTSUSG00000004835
UniProt: A0A4X1W5J6
LinkDB
Position
X:complement(98668945..98730582)
AA seq 915 aa
MSQSSGSGDGSDDGAVEEGTGFSSPNPSAAAAAQEIRSATDGNTSTTPPTSAKKRKLNSS
SSSSGSNSSNEREDFDSTSSSSSTPPLQPRDSASPSTSSFSCLGVSVAAPSHVPIQKKLR
FEDTLEFVGFDAKMAEESSSSSSSSSPTAATSQQQQLKNKSILISSVASVHHANGLAKSS
TTVSSFANSKPGSAKKLVIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEEL
YQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQM
IMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNG
EAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKR
LEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLF
SRVRGGVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKF
INAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGK
DVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMI
QFKQVKYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSG
RKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGEL
RRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQAST
TERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDY
MERDKENPNQYNYIA
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgtcacagtcatctggatcaggggatgggagtgatgatggagctgtcgaagaaggcact
ggtttttcttcccccaatccctcagctgctgctgctgctcaggagatcagatctgccact
gatggtaataccagcaccactccgcccacctctgccaagaagagaaagttaaacagcagc
agcagcagtagcggcagtaacagtagtaacgagagagaagactttgattccacctcttcc
tcctcttccactcctcctttacaacccagggattcggcatccccttcaacctcgtccttc
tcctgcctgggggtttcagtggctgctcccagccacgtaccaatacagaagaagctgcgt
tttgaagacaccctggagtttgtagggtttgatgcgaagatggctgaggaatcctcctcc
tcctcctcctcatcttcaccaactgctgcaacatctcagcagcagcaacttaaaaataag
agtatattaatctcttctgtggcttcggtgcatcacgcaaacggcctagccaaatcttct
accaccgtctctagctttgctaacagcaagcctggctctgctaagaagttagtgatcaag
aactttaaagataagcctaaattaccagaaaactacacagatgaaacatggcagaaacta
aaagaagcagtggaagctatccagaatagtacttcaattaagtacaatttagaggaactc
tatcaggctgtggaaaatctctgttcttacaagatttctgctaacttgtacaaacagctg
agacagatttgtgaagatcacatcaaagcacaaattcatcagttcagagaagattcattg
gatagtgttctttttctaaagaagatcgatagatgttggcaaaaccactgcagacaaatg
ataatgatcagaagcatttttttgtttctggataggacttacgttcttcagaattcaatg
ctaccctccatttgggacatgggactggagttattcagagctcatattattagtgatcag
aaagtccagaataagacaattgatggcattcttcttttgattgagagggaaaggaatggt
gaagcaattgatagaagtttactccgaagccttttaagcatgctctctgatttgcaaatt
tatcaggattcttttgaacaacgatttttggaagaaactaaccgactctatgcagctgaa
ggccaaaaattaatgcaggaaagagaggttcctgaatatcttcatcatgttaacaaacgt
ctagaagaagaagcagacagacttattacttacttagatcagaccacccagaagtcatta
attgctactgtagagaaacaacttctaggtgaacacttaacagcaattcttcagaaaggt
ttaaataatctccttgatgaaaaccgaattcaagatttatctctcctatatcaactcttc
agtagagttcgaggaggcgttcaggttctcttgcaacagtggattgaatacattaaggca
tttggtagcactattgtaattaatcctgaaaaggataaaaccatggttcaagaattactg
gattttaaagataaggttgaccatataattgatatctgttttctgaagaatgaaaaattt
atcaacgccatgaaagaagcatttgaaacatttattaacaaaagaccaaacaaacctgct
gaacttatagctaagtatgtagattcaaagcttcgtgcaggaaacaaagaagctacagat
gaagaacttgagaaaatgttggataagattatgattatatttagatttatctatggcaag
gatgtttttgaggccttctataagaaagatttagccaagcgccttttagttggaaagagt
gcatctgtagatgctgaaaaatcaatgctgtccaaacttaagcatgaatgtggagctgct
ttcaccagcaaacttgaaggaatgtttaaagacatggaactttctaaagacatcatgatt
caattcaaacaggtaaaatatatgcagaaccagaacgtacctgggaatattgaattaact
gtgaatatcctaacaatgggttattggccaacatatgtgcctatggaagtccatttacca
ccagagatggtaaaacttcaggagattttcaagacattttacctaggtaaacatagtggc
aggaaacttcagtggcaatcaaccctaggacattgtgtgctaaaggcagaatttaaggag
ggtaaaaaagaactccaggtctctctttttcaaacactggtgctgctaatgtttaatgag
ggagaggagttcagtttagaagagatcaagcaggctactggaatagaggatggagagtta
aggagaacactgcagtcattggcctgtggcaaagctagagttctggcaaaaaatccaaag
ggtaaagatatcgaagatggtgacaagttcatttgtaatgatgatttcaagcacaaactt
ttcaggataaagatcaatcaaattcagatgaaagaaacggttgaggaacaagcaagcact
acagaaagagtatttcaagacagacagtatcaaattgatgctgcaattgttcgaattatg
aagatgagaaagacacttagccacaatctccttgtttcagaagtgtacaaccagttgaaa
tttccagtaaagcctgctgatcttaagaagagaatagaatccttaattgaccgggactac
atggaaagagataaagaaaacccaaaccagtacaattatattgcataa

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