KEGG   Sus scrofa (pig): 100513568
Entry
100513568         CDS       T01009                                 
Symbol
CHAF1B
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit B
  KO
K10751  chromatin assembly factor 1 subunit B
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100513568 (CHAF1B)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     100513568 (CHAF1B)
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 CAF-1_p60_C WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 ANAPC4_WD40 EIF3I WDR55 Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd B-prop_COPA_B_2nd Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SPT8 eIF2A Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_EML WDR90_beta-prop_4th RMC1_N Ge1_WD40 Beta-prop_IP5PC_F Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 100513568
NCBI-ProteinID: XP_013838032
Ensembl: ENSSSCG00000012056
LinkDB
Position
13:200048096..200074902
AA seq 605 aa
MKVITCEIAWHNKEPVYSLDFQHGTAGRIHRLASAGVDTTVRIWKVEKGPDGKAIVEFLS
NLARHTKAVNVVRFSPNGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWT
VVKTLRGHLEDVYDICWAADGNVMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWD
PLGQYVATLSCDRILRVYSTQKKRVAFNVSKMLSGVGAEGEARSYRMFHDDSMKSFFRRL
SFTPDGSLLLTPAGCVESGENVTNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFAL
RPAVEAEPSVELVSLPYRLVFAVASEDSVLLYDTQQLFPFGYVSNIHYHTLSDISWSSDG
AFLAISSTDGYCSFVTFEKDELGIPLKEKPVLSVRTPDTAKKTKSQTQSLPGPRLVEGTP
TSRAQDPSSPSATPPPGKQSLAPAAAKDTPAATPAARGFWAAPSEEKTLQASSQNVKGHP
PRRVTLNTLQAWSKSTPRRINLIPXKTDSPPNSIPTPLASSPSTEEIQSEVPGDPQGSPL
ELKRPRLSEPKEGPKAWTLDEPWLVPEGCQVWGPREPSGVEGRGGRHLGPAASDGARRTL
ANSFL
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgaaagtcatcacttgcgaaatcgcctggcacaacaaggagccggtgtacagcctggac
tttcagcatggaaccgcggggaggatccacagactggcgtccgcgggcgtggacaccact
gtcaggatctggaaggtggaaaaaggaccagatggaaaggccattgtggaatttctgtcc
aaccttgctcgccacaccaaagctgtcaacgttgtgcgtttttctccaaatggggaaatc
ttagcatcaggaggggatgatgctgtcattctgttgtggaaggtgaatgataacaaggag
ccagaacagattgcttttcaggacgaggatgaggctcagctgaacaaggagaactggacg
gtggtgaaaaccctgaggggccacttagaagacgtgtatgatatttgctgggcagctgat
ggaaatgtgatggcttctgcctctgtggataacacggccatcatatgggatgtcagtaaa
ggacaaaagatctccatttttaatgaacataaaagttacgtacaaggagtaacctgggat
cctttgggtcaatatgtggccaccctgagctgtgacaggatcctgagggtatacagcact
cagaagaaacgtgtggcttttaatgtgtcaaagatgctgtctggagtaggggccgaagga
gaggcaagaagttaccggatgttccatgatgacagcatgaagtccttcttccgcagactt
agtttcactccggatggatctttgctcctcacgccagctggatgtgtggaatctggtgaa
aatgtaacgaatacaacttatgttttctccaggaaaaatctgaaaaggcccatcgcccac
ctcccatgtcccgggaaggcgaccctcgctgtccgctgctgccccgtctactttgcgctg
aggccggcggtggaagcagagcccagcgtggagctggtgagcctgccgtaccgcttggtg
tttgctgtggcttccgaagactccgtgcttctgtatgacacccagcagctgttcccgttt
ggctatgtgtctaacatacattaccacaccctgagcgacatttcctggtccagcgacggg
gccttcctggccatttcctccacggatggttactgttccttcgtgacgtttgagaaggat
gagcttggaatacccttgaaagagaaaccggttctgagcgtgagaacgcctgatacagcg
aagaaaaccaagagtcagacccagtctttgccaggccccaggctggtagaagggacaccc
accagcagggcccaggaccccagcagcccctctgcaaccccccctccagggaagcagtct
ctggcccctgcagcagccaaggacacccctgcggccacccctgccgccagaggcttctgg
gcagcaccctcagaggagaagaccctgcaggccagcagtcagaacgtgaaaggccacccg
ccccggagggtcactctgaacacgctgcaggcctggagcaagtcaacaccccggagaata
aacttaatacccntaaagacagacagcccgccgaattctataccaacccctctagcatcc
agcccttccacagaggaaatccaatcagaggtgcctggggacccgcagggcagccctctg
gagctgaagcggcccagactcagtgagcccaaggaaggccccaaggcctggacccttgat
gagccctggctggtgcctgaaggctgccaggtctggggaccccgtgagcccagcggggtg
gaggggcgaggcggacgacacctgggaccagcggcctcagacggagccagacggacactc
gcaaattcatttctttag

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