Sus scrofa (pig): 100513739
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Entry
100513739 CDS
T01009
Symbol
PSMA8
Name
(RefSeq) proteasome subunit alpha type-7-like isoform X1
KO
K02731
20S proteasome subunit alpha 4 [EC:
3.4.25.1
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03050
Proteasome
ssc05010
Alzheimer disease
ssc05012
Parkinson disease
ssc05014
Amyotrophic lateral sclerosis
ssc05016
Huntington disease
ssc05017
Spinocerebellar ataxia
ssc05020
Prion disease
ssc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100513739 (PSMA8)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100513739 (PSMA8)
05012 Parkinson disease
100513739 (PSMA8)
05014 Amyotrophic lateral sclerosis
100513739 (PSMA8)
05016 Huntington disease
100513739 (PSMA8)
05017 Spinocerebellar ataxia
100513739 (PSMA8)
05020 Prion disease
100513739 (PSMA8)
05022 Pathways of neurodegeneration - multiple diseases
100513739 (PSMA8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssc01002
]
100513739 (PSMA8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100513739 (PSMA8)
03051 Proteasome [BR:
ssc03051
]
100513739 (PSMA8)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
100513739 (PSMA8)
Peptidases and inhibitors [BR:
ssc01002
]
Threonine peptidases
Family T1: proteasome family
100513739 (PSMA8)
Membrane trafficking [BR:
ssc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100513739 (PSMA8)
Proteasome [BR:
ssc03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
100513739 (PSMA8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
100513739
NCBI-ProteinID:
XP_020951854
Ensembl:
ENSSSCG00000003717
UniProt:
A0A4X1VLE1
F1SBA5
LinkDB
All DBs
Position
6:110799065..110836937
Genome browser
AA seq
250 aa
AA seq
DB search
MASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVAIRGTDIVVLGVEKKSVAKLQDERT
VRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKY
TQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTE
DAIANDNEAIKLAIRALLEVVQSGGKNIELAIIRRNQPLKMFSAKEIELQVNEIEKEKEE
AEKKKSKKTA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcgctatgaccgggcgatcacagtcttctcccctgatggacacctgttccaa
gtggaatatgcccaggaagccgtgaagaaagggtccacagcggttgcaattcgaggtact
gatatagttgtgctcggggttgaaaaaaaatccgttgccaagcttcaagatgaaagaact
gtgagaaaaatttgtgcccttgatgaccatgtctgcatggcttttgcaggactgactgct
gatgcaagagtagtaataaatagggcccgtgtggagtgccagagtcataagcttactgtt
gaggacccagtcactgtagaatatataactcgcttcatagcaaccttaaagcagaaatat
actcagagcaatggacgaagaccttttggtatttctgccttaattgtaggttttgatgat
gatggtatcccaagattatatcagactgatccctctggtacttaccatgcttggaaggca
aatgcaataggtcgaagtgctaaaactgtccgagaatttctagaaaagaattacacagaa
gatgctatagccaacgacaatgaagctatcaaattagcaataagagcattgctggaagtt
gtccagtctggtggaaaaaacatcgaacttgctataataagaagaaaccaacctttgaaa
atgtttagtgccaaagaaattgaattacaagtaaatgaaatagaaaaggaaaaggaagaa
gcagagaagaaaaaatcaaagaagactgcctaa
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integrated database retrieval system
