Sus scrofa (pig): 100513812
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Entry
100513812 CDS
T01009
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100513812 (TOPORS)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100513812 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100513812 (TOPORS)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100513812 (TOPORS)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100513812 (TOPORS)
UBL E3 ligases
100513812 (TOPORS)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100513812 (TOPORS)
Cilium and associated proteins [BR:
ssc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100513812 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
100513812
NCBI-ProteinID:
XP_005668133
Ensembl:
ENSSSCG00000011004
UniProt:
A0A4X1UN45
A0A287AMD1
LinkDB
All DBs
Position
10:33865967..33878135
Genome browser
AA seq
1049 aa
AA seq
DB search
MQDKGSQQPPGSPLSREEGEAPPPAPALEGRRRSRRVRLRGSCRHRPSFLGRRELATSAP
AGPAPASSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLD
RCLHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSHNGSFATPDVR
RFRYRTTMTRERSASVYSPSRPLNRRTTTPPDSGVLFEGLGLSARPRDGEISPFMRQIAV
RRPTTADERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISAEFFRRNPACLHRL
VPWLKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFI
SFARSPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDEAETQELDINVATVSQAPW
DDETPGPSYSSSEQVQASMSSLLNTSDSSDEELVTGRATSQIQGVQTNEDLNNDSDSSSD
NCVIVGFVKPLAERTPELVELSSDSEELGSYEKMETVKTQEQEQSYSSGDSDVSRCSSPR
SVLGKDEQINKGHCDSGTRIKSKKEEKHSTSLSSPRDLSSSIRGDRVYSPYTHRHRRRGR
SRSSDSRSQSRSGHDQKNRRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRR
SQTLSLSSESTSRSRSRSSDHGKRRSRSRNRDRYYLRNNYGSRYKWEYTYYSRNKDRDGY
ESSYRRRTLSRAHYSRQSSSPEFRINSSFSERTNARKKNNHSERKYYYYERHRSRSLSST
RSRTASTGPDRTRNEKPGGKRKYKTRHLEGANEMAQPSREFASKVKESHYQKSSSKLDAS
YKNESDSFSDSRSSDRETKHKRRRRRTRSLSVEIVYEGKATDTARHHKKKKKKHKKKHKK
HHGDNASHSPVVITIDSDSDKDSEVKEDVECDPSGPQDPLQSEFLASSLESFETKDVVTI
EDEFGVLSKECDFTTLSNNLNNANKTVDNIPPQAASVEQTLDVREESTFASHLENQSSNG
SIQTELSRQLPSPRTSLMSVSLGRDHDMS
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgcaggataaggggtcgcagcagccgccggggtctccgctgtctcgcgaggagggtgaa
gcgcccccgcccgctccggctcttgagggccggcggagaagtcgccgggttcgccttcgt
gggtcctgccgtcaccgacccagctttctgggccgccgggagcttgccacgagcgcccca
gccgggcctgcaccggcatcctccgagataatggcatcagccgctaaggaatttaaaatg
gacaacttttcacctaaagcaggcactagcaaattgcagcaaacagttccagctgatgca
tctcctgattctaagtgtcctatatgcttggatagatttgataatgtgtcttacttagat
cgctgtttacataagttctgttttcgatgtgtacaggagtggtcaaaaaacaaagctgaa
tgtccactgtgtaaacagccctttgattctattttccattctgtgagggcagaagatgac
ttcaaggagtatgtcctaaggccttcacacaatggttcctttgctactcctgatgttcgg
agattccgctaccgtacaactatgacaagggaacgaagtgcttctgtttattcacctagt
cgtcccttgaatagaagaacaacaactccaccagatagtggagtactatttgaagggtta
ggcctttcagcaagacccagagatggtgaaatttctccattcatgagacagattgcagtg
aggaggccaacaactgcagacgaaagatctttgcggaaaattcaagaacaggatattatt
aattttaggcgaactctttatcgtgctggtgctcgagttagaaatattgaagatggtggt
cgctacagggatatttcagctgaatttttccgtagaaatccagcttgccttcacagatta
gtcccctggttaaaacgtgaactcacggttctctttggagctcatggatctttggtgaat
atcgtccagcacatcatcatgagcaatgttactcgttatgacttggagagtcaggcattt
gtgtctgatttaaggccatttttacttaatcggactgagcattttatacatgaatttatc
agttttgctcgatctccttttaatatggcagcttttgaccagcatgcaaattatgattgc
cctgctccttcatatgaagaaggtagccattctgattcttcagtcataacaatatctcca
gatgaagctgagacccaagagctagatattaatgtagccactgttagtcaagcaccatgg
gatgatgaaactccagggccatcatattcaagctcagagcaggtgcaggcttccatgtct
tcccttttaaatacttctgatagctcggatgaagaacttgtaacaggaagagccacatct
cagatacaaggagtacaaaccaatgaagacctaaataatgacagtgattcttcttcagat
aattgtgttattgttgggtttgttaagccactagctgagaggaccccagaacttgttgaa
ctgtcctctgattctgaggaattaggctcttatgagaaaatggagacagtgaagacacaa
gaacaagaacagtcttacagttctggtgatagtgatgttagcagatgttcatctccaagg
tctgtccttggaaaggatgaacaaataaataaaggtcattgtgattctggtacaagaatc
aaatcaaagaaggaagagaaacactctacatcattgtcctctcccagagacctgagctca
tccatcagaggagacagagtatattccccatatacccacagacacagaaggaggggaaga
tcgagaagttcagattcacgctcccagagtaggagtgggcatgatcagaagaatcgtaga
aagcatcatgggaagaaaagaatgaaaagcaaacgatccagaagcagggagagtagcaga
cctagaggtagaagagacaaaaagaggtcaagaactagagatagcagttggtctagaaga
agccagactctgtctctaagtagtgaaagcacaagcagatcaagatctcgtagcagtgat
catggtaaaagaagatcacggagcagaaatagagatcgttactatttaagaaataattac
ggaagcagatataagtgggagtatacttactatagtagaaacaaggacagggatggctac
gaatcatcttacaggagaaggactctgtccagagctcattattccagacaatcttcaagt
ccagagtttagaattaattcatccttttctgaaagaacaaatgctaggaaaaaaaataat
cacagtgaaaggaaatactactactatgaaaggcatagatcaaggagcctgtctagtact
cgatcaaggactgcatctacagggcctgaccggacaagaaatgaaaagcctggcgggaag
cgaaaatacaaaacgcggcatttggaaggtgctaatgaaatggctcagccatctcgtgaa
tttgcttctaaagtaaaggaaagtcattaccaaaaatcttcatcaaaattggatgcaagc
tacaaaaatgagagtgacagcttttcagacagccgatcatcagacagagagacaaaacac
aagaggagaaggagaaggacccggagcctaagtgtagagatagtttatgaagggaaagct
accgatacagctagacatcataaaaagaaaaagaagaaacataagaagaagcataagaaa
caccatggcgataatgcttcacattccccagttgtgattaccattgacagtgacagtgat
aaggattctgaagtaaaggaggatgtagaatgtgaccctagtggtcctcaagaccctctg
caaagtgaatttttggcttcttccttggaatcatttgaaactaaagatgtagttacaata
gaagatgaatttggtgtcctgagcaaggagtgtgatttcaccacacttagtaacaacttg
aataatgccaacaaaactgtagataatattccaccccaggcagcttcagttgaacaaact
cttgatgtgagagaagagagcacctttgcctctcatttggagaaccagtccagtaatggc
tcgattcagactgagctgtcaaggcagctgccatcgccacggacatcattaatgtcagtg
tctcttggtagagaccatgatatgtcttaa
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integrated database retrieval system
