Sus scrofa (pig): 100513828
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Entry
100513828 CDS
T01009
Symbol
FOXA2
Name
(RefSeq) hepatocyte nuclear factor 3-beta isoform X1
KO
K08035
forkhead box protein A2, hepatocyte nuclear factor 3-beta
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04213
Longevity regulating pathway - multiple species
ssc04950
Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
100513828 (FOXA2)
09160 Human Diseases
09167 Endocrine and metabolic disease
04950 Maturity onset diabetes of the young
100513828 (FOXA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100513828 (FOXA2)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix developmental regulators
100513828 (FOXA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Forkhead
HNF_C
Forkhead_N
DUF4799
Motif
Other DBs
NCBI-GeneID:
100513828
NCBI-ProteinID:
XP_003134339
Ensembl:
ENSSSCG00000007114
UniProt:
A0A286ZU79
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Position
17:complement(29997397..30001704)
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AA seq
463 aa
AA seq
DB search
MHSASSMLGAVKMEGHEPSDWSSYYAEPEGYSSVSNMNAGLGMNGMNTYMSMSAAAMGSG
SGNMSAGSMNMSSYVGAGMSPSLAGMSPGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLG
GQAAGAMGGLAPYANMNSMSPMYGQAGLSRARDPKTYRRSYTHAKPPYSYISLITMAIQQ
SPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWT
LHPDSGNMFENGCYLRRQKRFKCEKQLALKEASGAAGGGKKTAAGAQASQGQLGEAAGPA
SETAAGTESPHSSASPCQEHKRGGLGELKGTPATALSPPEPAPSPGQQQQAAAHLLGPPH
HPGLPPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHGHHHHQPHKMDLKAYEQVMHYPGY
GSPMPGSLAMGPVTNKAGLDASPLAADTSYYQGVYSRPIMNSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcactcggcttccagtatgctgggagcggtgaagatggaagggcacgagccgtccgac
tggagcagctactatgccgagcccgagggctactcctcggtgagcaacatgaacgccggc
ctggggatgaacgggatgaacacttacatgagcatgtcggcggccgccatgggcagtggc
tcgggcaacatgagcgccggctccatgaacatgtcgtcgtacgtgggcgcgggcatgagc
ccatccctggccggcatgtctcccggggcgggcgccatggccggcatgggcggctcggcc
ggggcggccggcgtggcgggcatggggccgcacctgagccccagcctgagccccctcggg
ggccaggcggccggggccatgggcggcctggcgccctacgcgaacatgaactcgatgagc
cccatgtacgggcaggccggcctgagccgcgcgcgcgaccccaagacctaccggcgcagc
tacacgcacgccaagccgccgtactcgtacatctcgctcatcaccatggccatccagcag
agccccaacaagatgctgaccctgagcgagatctaccagtggatcatggacctcttcccc
ttttaccggcagaaccagcagcgctggcagaactccatccgccactcgctctccttcaac
gactgcttcctcaaggtgccccgttcgcccgacaagcccggcaagggctccttctggacc
ttgcaccccgactcgggcaacatgttcgagaacggctgctacctgcgccgccagaagcgc
ttcaagtgcgagaagcagctggccctgaaagaggcctcgggcgccgcgggcggcggcaag
aagacggctgccggggcccaggcctcgcaggggcagctcggggaggccgccgggccggcc
tcggagactgcggccggcaccgagtcgccccactcgagcgcttccccgtgccaggagcac
aagcgaggggggctcggggagctgaaggggacgccagccacagcgctgagccccccggag
ccggcgccgtcgcctgggcagcagcagcaggccgcggcccacctgctgggccctccccat
cacccgggcctgccccccgaggcccacctgaagcccgagcaccactacgccttcaaccac
cccttctccatcaacaacctcatgtcttccgagcagcagcaccaccacggccaccaccac
caccagccccacaaaatggacctcaaggcctacgagcaggtgatgcactacccgggctac
ggctcccccatgccaggaagcctggccatgggcccggtcacgaacaaagcgggcctggac
gcctcgcccctggctgcagacacctcctactaccagggggtgtactcccggcccattatg
aactcctcttaa
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