Sus scrofa (pig): 100513881
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Entry
100513881 CDS
T01009
Symbol
AATF
Name
(RefSeq) protein AATF isoform X1
KO
K14782
protein AATF/BFR2
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100513881 (AATF)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
90S particles
Other 90S particles
100513881 (AATF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AATF-Che1
TRAUB
Vif
Motif
Other DBs
NCBI-GeneID:
100513881
NCBI-ProteinID:
XP_003131755
Ensembl:
ENSSSCG00000017693
UniProt:
A0A4X1SYZ2
A0A5G2QIB9
LinkDB
All DBs
Position
12:38461809..38563537
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AA seq
562 aa
AA seq
DB search
MAGPQPLALQLEQLLNPRPREADPEADPEEATAARVIDRFDEGDDGEGDFPVVGTIRKLA
SASFLDTDKRYSGKTTSRKAWKEDHWEQTLPGSSDKETSDEEGSGDGDSEGLGLEESDEE
QECGDDGDSAPAWNKSRSRSGEAAGFSVEGIRDFEKFTEGMDALGSSEEEEEDEEEESGM
EEGDGAEDSEGESGEDTAQDGASEDDGVVMTFSSARVSEEVEKGRAVKNQIALWDQLLEG
RIKLQKALLTTNQLPQPDVFPIFKDKGGPEFASALKNSHKALKALLRSLVDLQEELLFQY
PDTRYLVDGTKPKAGSEEEISSEDEDELIEEKKKQQKRVPAKRKLETEDYPSFMAKRFAD
FTVYRNRTLQKWHDKTKLASGKLGKGFGAFERSILTQIDHILMDKERLLRRTQTKRSIYR
ILGKPEPAAQPVPESLPGQPEILPQAPANAHLKDLDEEIFDDDDFYHQLLRELIERKTSS
LDPNDQVAMGRQWLAIQKLRSKIHKKVDRKASKGRKLRFHVLSKLLSFMAPIDHTTMNDD
ARTELYRSLFGQLNPPDDGHGP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccgcagcctctggcgctacagctggaacagttgttgaacccgcgaccgcgc
gaagcggatcctgaagcggacccggaggaggccactgctgccagagtgattgacaggttt
gatgaaggggacgatggggaaggcgatttccccgtggtgggtaccattagaaagctggca
tcagcctccttcttggatacagacaagaggtattctggcaagaccacctctagaaaagct
tggaaggaagaccattgggagcagactctgccaggttcatctgataaagaaacatctgat
gaggaagggtctggagatggagattcagaggggctgggtctggaagaatccgatgaggaa
caggagtgtggtgatgacggggacagtgctccggcctggaacaagagcagaagccgctcc
ggtgaggcggcgggcttcagtgtcgagggcatccgtgactttgagaagttcaccgaggga
atggatgccctgggtagcagtgaggaggaggaggaagacgaggaggaggagagtggtatg
gaagaaggggacggtgcggaggactcggaaggcgagagtggggaggacacggcccaggac
ggggccagcgaggacgacggcgtggtgatgaccttctccagcgccagggtttccgaggaa
gtggagaaaggccgagctgtgaagaaccagatagcactgtgggaccagctcttggaagga
aggatcaagttacaaaaagccctcctgaccaccaatcagcttcctcaaccagatgttttc
cctattttcaaggacaaaggtggcccagaatttgccagcgccctaaaaaacagtcacaag
gcactaaaagcattgctgaggtccttggtagatcttcaggaagagctgcttttccagtat
ccagacactagatatctagtagatgggacaaagcccaaagcaggaagtgaggaggagatt
tccagtgaagatgaagatgagctgatagaagaaaagaagaagcagcagaagagggtccca
gcaaagaggaagctggagactgaggactaccccagcttcatggccaagcgctttgctgac
ttcactgtctacaggaaccgcacgctccagaagtggcacgataagactaagctggcttct
ggaaaactggggaagggttttggggcctttgaacgctcaatcttgactcagatcgatcat
attctgatggacaaagaaaggttacttcgaaggacacagaccaagcgctccatctaccga
attcttggcaaaccggaaccagcagcacagcctgtcccagagagtttgccgggacagccg
gagatccttcctcaggcccctgccaatgcccacctgaaggacttggatgaagaaatcttt
gatgatgatgacttttaccaccagctccttcgagaactcatagaacggaagaccagctcc
ttggatcccaatgatcaggtggccatgggaaggcagtggcttgcaatccagaaattgaga
agcaaaatccacaagaaagtagataggaaagccagcaaaggaaggaaacttcgatttcac
gtccttagcaagcttctgagcttcatggcgcccattgaccacaccacaatgaatgatgat
gccaggacagagttgtatcgatctctttttggccaactcaacccgcccgacgacggccac
gggccctga
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