Sus scrofa (pig): 100513973
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Entry
100513973 CDS
T01009
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03013
Nucleocytoplasmic transport
ssc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100513973 (NUP160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100513973 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100513973 (NUP160)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100513973 (NUP160)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100513973 (NUP160)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100513973 (NUP160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Nup160_C
TPR_NUP160_120_M
Beta-prop_Nup120_160
NUP160_helical
HEAT_Nup120
DUF3942
TTC22_C
Motif
Other DBs
NCBI-GeneID:
100513973
NCBI-ProteinID:
XP_020940711
Ensembl:
ENSSSCG00000013223
LinkDB
All DBs
Position
2:14840056..14891567
Genome browser
AA seq
1478 aa
AA seq
DB search
MQILQAPPASSHLASSLPTLSPASSVEASQRWVGQALDLSGFLHLSASVLAPPPEVTTAA
RLGWCPVRPRGGGGGKMAAAGAMERSFVELSGAERERPRHFREFAVCDIGTANAVAGAVK
YSESAGGFYYVESGKLFSVTRNRFIHWKTSGDTLELVEESLDVNLLNNAVRLKFQNCSLL
PGGVHVAETQNHVILLILTNQTVHRLLLPHPSRMYRSELVIESQMQSVFTDIGKFDFRDP
YNYQLIPAAPGLSPNSTTSAAWLSNDGEALFALPSASGGIFVLKLPPYDVPGMVSVVELK
QSSVMQRLLIGWMPTAIRGDQGPSDRPLSLAVHCVEHDAFIFALCQDHKLRMWSYKDQMC
LMVADMLEYVPVNKDLRLTAGTGHKLRLAYSPSMGLYLGIYMHAPKRGQFCVFQLVSTEN
SRYSLDHISSLFTSQETLIDFALTSTDIWALWHDAENQTIVKYINFEHNVAGQWNPVFIQ
PLPEEEIIIRDDQDPREMYLRSLFTPGRFTNAALCKALQIFCRGTERNLDLSWSELKREV
TLAVESELQGSVTEYEFSQEEFRNLQQEFWCKFYACCLQYQEALSHPLALHLNPHTNMVC
LLKKGYLSFLVPSSLVDHLYLLPDENLLTEDETTISDDVDVARDVICLIKCLRLIGESVT
MDMSVMMEMSCYNLQSPEKAAEQILEDLITIDVDNVMEDICSKLQEIRNPIHAIGLVIRE
MDYETEVEMEKGFNPAQPLNIRMNLSQLYGSSTAGYIVCRNVCKIASTRFLICRDLLILQ
QLLMRLGDAVILGAGQLFQAQQDLLHRTAPLLLSYYLIKWGSQCLATDVPVDTLESNLQH
LSVLELTDSGTLTANKFVSSPQTIVELFFQEVARKHIISHLFSQPKAPLSQTGLNWPEMI
TAITSYLLQLLWPSNPGCLFLECLMGNCQYVQLQDYIQLLHPWCQVNVGSCRFMLGRCYL
VTGEGQKALECFCQAASEVGKEEFLDRLIRSEDGEIVSTPRLQYYDKVLRLLDVVGLPEL
VIQLATSAITEAGDDWKSQATLRTCIFKHHLDLGHNSQAYEALTQIPDSSRQLDCLRQLV
VVLCERSQLQDLVEFPYVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAG
TVMFEYGMRLGREVRTLRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVYDRPGASP
KRNHDGECTAAPTNRQIEILELEDLEKECSLARIRLTLAQHDPSAVAVAGSSSAEEMVTL
LVQAGLFDTAISLCQTFKLPLTPVFEGLAFKCIKLQFGGEPAQAEAWAWLAANQLSSVIT
TKESSATDEAWRLLSTYLERYKVQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELL
RLYLNYDLLEEAVDLVSEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGE
NSANSHNIALSQKILDKLEDYQQKVDKATRDLLHRRLL
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcctgcaagctccccctgcctcctctcatctggcttcctccttgcccaccctg
tctccggccagctcggtggaagcctcacaacggtgggtcggacaggccctagacctttcc
gggtttcttcacctgtccgcatctgtgcttgctccgcccccggaagtgacgacagccgcc
cggctgggctggtgtcccgtcaggcctcgcggcggcggcggcgggaagatggcggcggcg
ggagccatggaacggagcttcgtagagctcagcggagctgagcgcgaaaggccaaggcac
tttcgggaattcgcagtttgcgacattggaactgcaaatgcagtggccggagctgtgaaa
tacagtgagagcgcgggaggcttctactacgtggaaagtggcaagttgttctccgtcacc
agaaacaggttcattcattggaagacctctggagatacactggagctggtagaagagtca
ctggacgtaaatctgttaaataatgcagttcgcctcaaattccaaaattgcagcctctta
cccggaggggttcatgtcgctgagactcagaatcacgtgatactcttgatattaaccaat
caaacagtgcacaggttacttttgccacacccttcccggatgtataggagtgagttggta
attgaaagtcagatgcagtcagtattcaccgacatcggaaaatttgatttcagggatcca
tacaactatcagttaattccagcagcacctggactctctcctaattccaccacatctgca
gcctggcttagcaatgatggggaggctctgtttgctctcccgtctgcttcggggggaatc
tttgtgcttaaactacctccttatgacgtacctggaatggtgtcagttgtggagctgaaa
cagagttcagtaatgcagcggctgcttataggctggatgccaacagctatcagaggtgat
caggggccttcagatcgtcccctgagtcttgctgttcactgtgtcgagcacgacgccttc
atctttgctctgtgtcaagatcataaactacgaatgtggtcttataaggaccagatgtgc
ctgatggtagctgacatgctggagtatgtccctgtgaataaagatcttcggctcactgct
gggactggacacaaattgcgactggcttattccccttccatgggcctctacctagggata
tacatgcatgcaccaaagcgaggacagttctgcgttttccagttggtgagcactgagaac
agccgctatagtctagatcacatttcctcacttttcacttctcaggagacactgattgac
tttgccttaacctctacggatatctgggccctgtggcatgatgctgagaaccaaacaatt
gtgaaatacatcaactttgaacataatgttgcaggtcagtggaatccagtttttatacag
cctctgccagaggaagaaatcattatcagagatgatcaagaccccagagaaatgtatttg
cgtagtctttttacaccaggacgattcacaaatgcagctttatgtaaagctttacagatt
ttctgtcgaggaactgagaggaatttagatctttcctggagtgagctaaagagagaagtt
actttagctgttgaaagtgagctccaaggaagtgtaacagagtatgaattctcccaggag
gagtttcgaaatttacaacaggaattctggtgcaagttctatgcctgttgtcttcagtac
caagaagctctttctcatcctcttgccctccatttaaatccacacacaaacatggtgtgc
ctgctgaaaaaagggtacctgtctttccttgtgccttcctccttagtggatcatttgtat
ctcctgcctgatgagaaccttttgacagaggatgagacaaccatatctgatgatgtggat
gttgctcgggatgtcatttgtcttataaaatgccttcgactgattggagagtcagtaact
atggatatgtcagtcatgatggaaatgagttgttacaacctacagtctccagaaaaggct
gcagaacagattctggaagatttgatcactattgatgtagacaatgtgatggaggatatt
tgcagtaaactgcaagagattcggaacccaatccatgccattggacttgttatacgggaa
atggattatgaaacagaagtggaaatggaaaagggattcaatccagctcagcctttgaat
attcgaatgaatctttcccagctctatggtagtagcacagctgggtatattgtgtgcaga
aatgtgtgtaagattgccagtactcgcttcctcatctgccgagatctgttgatcttacag
cagctactaatgaggctgggagatgcagtgattttgggagctggtcagctctttcaagct
cagcaagacctactacaccgaacagctcccctactcttatcctattacctcattaagtgg
ggaagtcagtgtttagcaactgatgttccagttgacacactagagtctaatcttcagcat
ttatcagtactggaactaactgactctgggactttaacagcaaataagttcgtatctagc
cctcagacaattgtggaattattcttccaagaagttgcaagaaaacacattatatctcat
ctcttctctcaaccaaaggcacctctaagccaaactggattgaattggcctgagatgatt
actgcaattaccagttatttattgcagcttttatggcctagcaatcctggttgtctcttt
ctagaatgtttgatgggaaattgtcagtatgtacaattgcaggattatattcagctgcta
catccttggtgccaagtcaatgttggttcctgtcgatttatgctgggacggtgttacctg
gtgaccggagagggacagaaggctctggaatgtttctgccaggcagcatctgaagtgggc
aaagaggaattcttagatcgcttgatccggtcagaggatggggagattgtgtccaccccc
aggctgcagtattatgataaggttttgcgtctgctagatgtggttggtttgcctgaactg
gttattcagttggctacgtcagcaataactgaagcaggtgatgactggaaaagtcaggct
actttaaggacatgcattttcaaacatcatttggatttgggtcacaatagccaagcatat
gaagccttaacccaaattcctgattctagcaggcagttagattgtttacggcagctggtg
gtagttctttgtgaacgctcacagcttcaggatcttgtcgagtttccctatgtgaatctg
cacaatgaggttgtgggaataattgaatcacgtgcaagagctgtggaccttatgactcac
aattactatgagcttctgtacgcctttcacatctatcgtcacaattaccgaaaggctggc
acagtcatgtttgagtacggaatgcgtcttggcagagaagttcgaactcttcggggactt
gagaagcaaggcaactgttatctggctgctattaattgtttacgacttattcgcccagaa
tacgcatggattgttcagccagcatctggtgcagtgtatgatcgccctggagcttcccct
aagaggaatcatgatggagaatgcacagctgccccaacaaatagacaaattgaaatcctg
gaactagaagatctggagaaagagtgttccttggctcgcattcgcctcaccctggctcag
catgatccctcagcagtcgcagtggcagggagttcgtcagcagaggagatggtcactctc
ttggttcaggccggcctttttgacactgccatatcactctgtcaaacctttaagctcccc
ttaacgccagtctttgagggacttgctttcaaatgcatcaaattgcagtttggaggagaa
ccagcacaagcagaagcctgggcctggctagcagccaaccagctgtcatcagtcatcacc
actaaggagtctagtgctacagatgaagcatggcgactcttatcaacttacctggaaaga
tacaaagtccagaataatttatatcaccactgtgtcattaacaagctcttgtctcatgga
gtgcctctgcctaattggcttataaacagttacaagaaggttgatgcagctgagttgctc
cgtctatacttaaactacgaccttttagaagaagctgtggacttggtgtctgaatatgtg
gatgctgtcttgggaaaaggacatcagtactttggaattgagtttccactgtctgcaaca
gctccaatggtgtggctcccatattcttctattgatcaacttctccaggctctgggagag
aacagcgccaacagtcacaacattgcactgtcccagaaaatacttgacaaattggaggac
taccagcaaaaagttgataaggcaacaagggatttattacatcgtcggctcttgtga
DBGET
integrated database retrieval system
