KEGG   Sus scrofa (pig): 100514035
Entry
100514035         CDS       T01009                                 
Symbol
SAMD1
Name
(RefSeq) LOW QUALITY PROTEIN: atherin
  KO
K26266  sterile alpha motif domain-containing protein 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100514035 (SAMD1)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Other PRC associated proteins
     100514035 (SAMD1)
SSDB
Motif
Pfam: SAMD1_WH SAMD1_SHD SAM_1 SAM_PNT SAM_2 PTPRCAP PBP1_TM Pox_Ag35
Other DBs
NCBI-GeneID: 100514035
NCBI-ProteinID: XP_003123412
LinkDB
Position
2:65096499..65099799
AA seq 537 aa
MAGPPALPPPETAAAATTAAATSSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR
RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGGPA
AAAAPPPTPAPPPPPAPVSAAAPARAPRAAAAAAATAPPSPGPAQPGPRAQRAAPLAAPP
PVPAAPPAAAPPAGPRRAPPPAVAAREPPXPPPPQPPAPPQQQQPPPPQPQQPPEGGAAR
AGGPARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGAPVVPRGD
RPGRAPPAASARASRSKRGGEERVLEKEEEEEDDEDEDDEDEVSEGSEVPEGDRPAGAQH
HQLNGERGPQSAKERVKEWTPCGPHQGQDEGRGPAPGSGTRQVFSMATMNKEGGSASSAT
GPDSPSPVPLPPGKPALPGADGTPFGCPSGRKEKPSDPVEWTVTDVVEYFTEAGFPEQAT
AFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALKIYEHHIKVLQQGHFEDEDPDGFLG
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggcggggcccccggccctacccccgccggagacggcggcggccgccaccacggcggcc
gctacctcgtcgtccgccgcttccccgcactaccaagagtggatcctggacaccatcgac
tcgctgcgctcgcgcaaggcgcggccggacctggagcgcatctgccggatggtgcggcgg
cggcacggcccggagccggagcgcacgcgcgccgagctcgagaaactgatccagcagcgc
gccgtgctccgggtcagctacaaggggagcatctcgtaccgcaacgcggcgcgcgtccag
ccgccccggcgcggagccaccccgccggccccaccgcgcgccccccgcgggggccccgct
gccgccgccgcgccgccgcccacgcccgccccgccgccaccgcccgcgcccgtctccgcc
gccgccccggcccgggcgccccgcgcggccgccgctgctgccgccacagcgcccccctcg
cccggccccgcgcagccgggaccccgcgcgcagcgggccgcgcccctggccgcgccgccg
cccgtgcccgccgctcctccggcggcggcgcccccggccggcccgcgccgcgcccccccg
cccgccgtcgccgcccgggagccgccgntgccgccgccgccacagccgccggcgccgcca
cagcagcagcagccgccgccgccgcagccacagcagccgccggaggggggcgcggcgcgg
gccggcggcccggcgcggcccgtaagcctgcgggaagtcgtgcgctacctcgggggcagc
ggcggcgccggcggccgcctgacccgcggccgcgtgcaggggctgctagaggaggaagcg
gcggcgcggggccgcctggagcgcacccgcctcggagcgcccgtggtgccccgcggggac
aggcctgggcgggcgccgccagctgccagcgcccgcgcgtcgcggagcaagagaggtgga
gaagagcgagtgcttgaaaaggaagaggaggaggaagatgatgaagatgaagatgatgaa
gatgaagtgtctgagggctctgaggtgccagagggtgaccgtcctgcaggtgcccagcac
catcagcttaatggcgagcggggccctcagagtgccaaggagagggtcaaggagtggaca
ccctgtggaccccaccagggccaggatgaaggacgggggccagcgccaggcagtggcacc
cgccaggtgttctccatggccaccatgaataaggaagggggatcagcctcatctgccact
gggccagactccccatcccccgtgcctttgcccccaggaaaaccagccctacctggggct
gatgggaccccctttggctgtccttctgggcgcaaggagaagccctctgatcctgtggaa
tggacggtgacggatgtggtagagtacttcaccgaggccggcttccccgagcaggccaca
gctttccaagagcaggaaattgatggcaagtctttgctgctcatgcagcgcacagatgtg
ctgactggcctgtccatccgcctcggcccagccctgaaaatctacgagcaccacatcaag
gtgctgcaacaaggccactttgaggatgaagaccctgatggctttctaggctga

DBGET integrated database retrieval system