Sus scrofa (pig): 100514035
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Entry
100514035 CDS
T01009
Symbol
SAMD1
Name
(RefSeq) LOW QUALITY PROTEIN: atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100514035 (SAMD1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
100514035 (SAMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAMD1_SHD
SAM_1
SAM_PNT
SAM_2
PTPRCAP
PBP1_TM
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
100514035
NCBI-ProteinID:
XP_003123412
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All DBs
Position
2:65096499..65099799
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AA seq
537 aa
AA seq
DB search
MAGPPALPPPETAAAATTAAATSSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR
RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGGPA
AAAAPPPTPAPPPPPAPVSAAAPARAPRAAAAAAATAPPSPGPAQPGPRAQRAAPLAAPP
PVPAAPPAAAPPAGPRRAPPPAVAAREPPXPPPPQPPAPPQQQQPPPPQPQQPPEGGAAR
AGGPARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGAPVVPRGD
RPGRAPPAASARASRSKRGGEERVLEKEEEEEDDEDEDDEDEVSEGSEVPEGDRPAGAQH
HQLNGERGPQSAKERVKEWTPCGPHQGQDEGRGPAPGSGTRQVFSMATMNKEGGSASSAT
GPDSPSPVPLPPGKPALPGADGTPFGCPSGRKEKPSDPVEWTVTDVVEYFTEAGFPEQAT
AFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALKIYEHHIKVLQQGHFEDEDPDGFLG
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcccccggccctacccccgccggagacggcggcggccgccaccacggcggcc
gctacctcgtcgtccgccgcttccccgcactaccaagagtggatcctggacaccatcgac
tcgctgcgctcgcgcaaggcgcggccggacctggagcgcatctgccggatggtgcggcgg
cggcacggcccggagccggagcgcacgcgcgccgagctcgagaaactgatccagcagcgc
gccgtgctccgggtcagctacaaggggagcatctcgtaccgcaacgcggcgcgcgtccag
ccgccccggcgcggagccaccccgccggccccaccgcgcgccccccgcgggggccccgct
gccgccgccgcgccgccgcccacgcccgccccgccgccaccgcccgcgcccgtctccgcc
gccgccccggcccgggcgccccgcgcggccgccgctgctgccgccacagcgcccccctcg
cccggccccgcgcagccgggaccccgcgcgcagcgggccgcgcccctggccgcgccgccg
cccgtgcccgccgctcctccggcggcggcgcccccggccggcccgcgccgcgcccccccg
cccgccgtcgccgcccgggagccgccgntgccgccgccgccacagccgccggcgccgcca
cagcagcagcagccgccgccgccgcagccacagcagccgccggaggggggcgcggcgcgg
gccggcggcccggcgcggcccgtaagcctgcgggaagtcgtgcgctacctcgggggcagc
ggcggcgccggcggccgcctgacccgcggccgcgtgcaggggctgctagaggaggaagcg
gcggcgcggggccgcctggagcgcacccgcctcggagcgcccgtggtgccccgcggggac
aggcctgggcgggcgccgccagctgccagcgcccgcgcgtcgcggagcaagagaggtgga
gaagagcgagtgcttgaaaaggaagaggaggaggaagatgatgaagatgaagatgatgaa
gatgaagtgtctgagggctctgaggtgccagagggtgaccgtcctgcaggtgcccagcac
catcagcttaatggcgagcggggccctcagagtgccaaggagagggtcaaggagtggaca
ccctgtggaccccaccagggccaggatgaaggacgggggccagcgccaggcagtggcacc
cgccaggtgttctccatggccaccatgaataaggaagggggatcagcctcatctgccact
gggccagactccccatcccccgtgcctttgcccccaggaaaaccagccctacctggggct
gatgggaccccctttggctgtccttctgggcgcaaggagaagccctctgatcctgtggaa
tggacggtgacggatgtggtagagtacttcaccgaggccggcttccccgagcaggccaca
gctttccaagagcaggaaattgatggcaagtctttgctgctcatgcagcgcacagatgtg
ctgactggcctgtccatccgcctcggcccagccctgaaaatctacgagcaccacatcaag
gtgctgcaacaaggccactttgaggatgaagaccctgatggctttctaggctga
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