Sus scrofa (pig): 100514101
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Entry
100514101 CDS
T01009
Symbol
RBM12B
Name
(RefSeq) RNA-binding protein 12B isoform X1
KO
K24526
RNA-binding protein 12
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssc03041
]
100514101 (RBM12B)
Spliceosome [BR:
ssc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100514101 (RBM12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
100514101
NCBI-ProteinID:
XP_003125614
Ensembl:
ENSSSCG00000006110
LinkDB
All DBs
Position
4:42946857..42971191
Genome browser
AA seq
986 aa
AA seq
DB search
MAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEVGEAFIIFATDEDARRAISRS
GGFIKDSSVELFLSSKAEMQKTIEMKRTDRMGRDRPGSGAPGVGSLSNFVEALKEEASNS
GYGSPINQDAGFHTNGTGHGDLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCV
DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGNA
MKEDDIPMRTEEHSQPRGINDRHFRKRSHSKSPRRTRSRSPLGFYVHLKNLSLSINKRDL
RNFFRDTDLTNEQIRFLYKDERRTRYAFVMFKTLKDYNTALGLHKTVLQYRPVHIDPVSR
KQMLKFIECYEKKRPASIEKEKLGHISQKYSQEGYSGQKLCIYIRNFPFDVTKVEVQKFF
ADFSLAEDDIYLLYDDKGIGLGEALVKFKSEEQAMKAERLNRRRFLGTEVLLRLISEVQM
QEFGVDFSLVSSERIHDHSQSCDRDDHFHSFDSNDLPVYSVGPSENLRHQQEDLRQLDSF
KHSQGDFRLPDRRPPGDFRHSPEDFRRSPEDFRRLREEHFRRPPEDDFRRPWEEDFRYPR
EEDFRYPREEDWRRPPEEDFRRPPKDDFRRPPEEDWRRPPEGDFRRPPEEDWRRPPEEDF
RRPPPGEWRRPPEEDFRRPPEEDFRRLPEEDFRRPHEEDFRRSPEEDFRHSPEDDFRRPP
PEHFRRPPPEHLRRPPPEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPPQEHF
RRPREEDFRHPLDEDFRGPPNEDFGHPPDEDFRSPQEEDFRCPSDEDFRRLPEEDLREAP
EEDPRLPDNFRLSGEQFRSPPDDFRSHRPFVNFGRPEGGKFDFGKRNMGSFPEGRFMPDP
KLNCNSGRVIPIKIMNLPFKANVNEILDFFHGYRVIPDSVSIQYNEQGLPTGEAIVAMIN
YNEAMAAIKDLNDRPVGPRKVKLILL
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagtcatccgtttactggggcttccttttattgcggggcctgtggatattcgt
cacttcttcacgggattgactattcctgatggaggagtgcatataattggaggggaagtt
ggggaggcttttattatttttgcaacagatgaagatgcaagacgtgccataagtcgttca
ggagggtttatcaaggattcatctgtagagctctttcttagtagtaaggcagaaatgcag
aagactatagaaatgaaaagaactgatcgcatgggaagagatcgaccaggatctggggca
ccaggggttggcagcttatctaattttgttgaggcgcttaaagaagaagcaagtaattct
ggatatggctctccaattaatcaagatgctgggtttcatactaatggtacaggacatggt
gatttaaggccaagaaagacacggccattgaaagctgaaaatccttacttgtttctgcga
ggtttgccttacttagtaaatgaagatgatgtacgtgtctttttctctggtttgtgtgtg
gatggagtaattttcttaaagcatcatgatggccgaaataatggtgatgccatagtaaaa
tttgcttcatgtattgatgcttcaggaggtcttaaatgtcatagaagttttatgggttca
agatttatagaagtaatgcaaggctcagaacaacagtggattgagtttggtggtaatgca
atgaaggaggatgacattcctatgaggactgaagaacattctcaaccaagaggaattaat
gatagacattttcggaaacgatctcattcaaaatctcccagaaggacacgttctcgttct
cctcttggattttatgttcacttaaaaaatctgtccctaagtattaacaaaagagattta
agaaatttctttagagatactgatttgactaatgaacagattagatttttatataaagat
gaaagaagaacaagatatgcctttgtgatgttcaagactctgaaagactataatactgct
ctaggtttacataaaactgttttacaatatcgcccggttcatatcgatccagtttctaga
aaacagatgctgaagttcattgagtgttatgaaaagaaaagaccagcctcaatagagaaa
gagaagcttggacacatttcacaaaaatactctcaagaaggctactctggccagaaactg
tgcatatatataagaaattttccattcgatgttacaaaagttgaagtgcagaagttcttt
gcagacttttctcttgctgaggatgatatttacttgctttatgatgacaaaggaattggt
ctgggagaagcattggtgaaattcaaatcagaagaacaggccatgaaagctgaacgttta
aatcgtcgaagattcttggggacagaggttttgttaaggcttatatctgaggtacaaatg
caggagtttggtgtagatttttctttagtgtccagtgagagaatacatgaccattcacag
tcgtgtgatagagatgatcatttccattcatttgattcaaatgatctaccggtatactca
gttggcccttctgaaaacttaaggcatcagcaagaggacttgaggcaactggacagtttc
aagcattcccagggggatttccgactgcctgataggcgccctccaggagactttaggcat
tccccagaggatttcaggcgctctccggaagactttaggcgccttcgggaggaacatttc
aggcgaccacctgaggatgacttcaggcgtccttgggaagaggacttcaggtaccctcga
gaggaggatttccggtaccctcgggaggaggactggaggcggccaccagaagaggatttc
agacggcctcccaaggatgacttcaggagaccacctgaggaagactggaggcggccccct
gagggagacttcagacggccacctgaggaggattggaggcggcctcccgaggaagacttc
agacggcctcccccaggagaatggaggagaccacctgaggaagactttaggcggccccct
gaggaggatttcaggagacttccagaggaagacttccgacggccccacgaggaggacttc
cggcggtctcctgaggaagatttcaggcattctccagaggatgacttccggcggccacct
ccggagcacttccggcggccgccaccggagcacttacgccggccaccgccagagcacttc
cgtcgaccgcctcaggagcatttccgccggccgccccaggagcatttccgacggccgcct
caggagcatttcagacggccgcctcaggagcatttcaggcggccaccccaggagcatttt
aggcgcccccgagaggaagattttaggcacccactggatgaagatttcaggggccctccc
aatgaagactttgggcaccctcctgatgaggacttcaggagtccccaggaggaagatttt
agatgcccttctgatgaggacttcaggcggctcccagaggaagacctcagggaagctccg
gaggaggaccctagacttcccgacaattttagactttctggtgagcagtttaggagcccc
cctgatgatttcagaagtcatcgcccttttgtgaattttggtcgcccagaaggtggcaag
tttgattttggaaagcgtaatatgggaagttttcctgaggggagatttatgcctgatccg
aaactaaattgtaattcaggtagagtaatacccattaagataatgaatcttccatttaaa
gctaatgttaatgaaattctagactttttccatggttatagagtcatacctgactcagtt
tcaatacagtataatgagcaaggactacctacaggggaagccattgttgccatgataaac
tacaatgaagctatggctgctattaaagatttgaatgataggccagttggcccccggaaa
gttaagttaattttgctttag
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